CX296846
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296846 vs. ExPASy Swiss-Prot
Match: RELA_STRAT (GTP pyrophosphokinase OS=Streptomyces antibioticus GN=relA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.798e-33 Identity = 80/207 (38.65%), Postives = 126/207 (60.87%), Query Frame = 3 Query: 36 LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKEL 656 + + L + +A +A H GQKR+SG+P+I HP+ V IL EL +D ++ AGLLHD+ EDT + + +FG V +V+G TK+ K+ + +A+ +R+M +AM ++ RV+++KLADRLHNMRT+ ++ KQ A ETL+++APLA LGM IK ELE+L+F + Y ++ R VA+ + ++ L Sbjct: 116 IETSTLRQIEKAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDSREDTEY-GLDDLRRDFGDVVGLLVDGVTKLDKV---------KFGEAAQAETVRKMVVAMAKDPRVLVIKLADRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEIVRLVAERAPKRDEYL 312
BLAST of CX296846 vs. ExPASy Swiss-Prot
Match: SPOT_MYCPN (Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Mycoplasma pneumoniae GN=spoT PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.881e-28 Identity = 73/229 (31.88%), Postives = 125/229 (54.59%), Query Frame = 3 Query: 15 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQ 701 L+ T +P + L+ +AL + + H QKR SGEPF IHP+ A L E +D ++ AGLLHD +EDT V + + FG + +V TK++ K K + N +D+ L + ++ +EV +++KLADRL N+ ++ + KQ IA ETL+++A +A +GMY +K++L +LSF + +++ ++ ++ E K L + +E +Q Sbjct: 25 LQKTAQKFAPEVVALITKALDYSKKWHGEQKRLSGEPFFIHPLRTALRLVEWNMDSNTVCAGLLHDIIEDTQVTEAD-LTAIFGKEITDLVVKVTKITSESK-KQRQLNRKKEDLNLKSLVNIAMSSQQEVNALVLKLADRLDNISSIEFLAVEKQKIIAKETLELYAKIAGRIGMYPVKTQLADLSFKVLDPKNFNNTLSKINQQKVFYDNEWGNFKKQLEEMLEQNQ 251
BLAST of CX296846 vs. ExPASy Swiss-Prot
Match: SPOT_MYCGE (Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Mycoplasma genitalium GN=spoT PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.558e-27 Identity = 71/218 (32.57%), Postives = 121/218 (55.50%), Query Frame = 3 Query: 48 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQ 701 E+EL+ +A A H+ QKR SGEPF IHP+ A L E +D +I AGLLHD +EDT+ T I F + +V TK++ K K ++ + +++ + + +E+ V+++KLADRL N+ ++ +P KQ IA ETL+++A +A +GMY +K++L +LSF + ++Y ++ ++ E + + L K + +Q Sbjct: 23 EIELINKAFYHAKTWHENQKRLSGEPFFIHPLRTALSLVEWNMDPITICAGLLHDIIEDTDQ-TEANIAMIFSKEIAELVTKVTKITNESK-KQRHLKNKKENLNLKSFVNIAINSQQEINVMVLKLADRLDNIASIEFLPIEKQKVIAKETLELYAKIAGRIGMYPVKTKLADLSFKVLDLKNYDNTLSKINKQKVFYDNEWDNFKQQLKKILAQNQ 238
BLAST of CX296846 vs. ExPASy Swiss-Prot
Match: RELA_SHIFL (GTP pyrophosphokinase OS=Shigella flexneri GN=relA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.478e-19 Identity = 53/174 (30.46%), Postives = 101/174 (58.05%), Query Frame = 3 Query: 141 VEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEE 662 VE+ IL L +D +++ A LL + D NVV+ + + E G +V ++ G ++ + +LK + + SV + D++R+M LAM ++ R +++KLA+R+ ++R + P ++ A E ++APLA LG+ Q+K ELE+ F Y + +Y ++ + + + + E +EE Sbjct: 60 VEMVEILSTLSMDIDTLRAALLFP-LADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTD-SVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEE 231
BLAST of CX296846 vs. ExPASy Swiss-Prot
Match: RELA_ECOLI (GTP pyrophosphokinase OS=Escherichia coli (strain K12) GN=relA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.478e-19 Identity = 53/174 (30.46%), Postives = 101/174 (58.05%), Query Frame = 3 Query: 141 VEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEE 662 VE+ IL L +D +++ A LL + D NVV+ + + E G +V ++ G ++ + +LK + + SV + D++R+M LAM ++ R +++KLA+R+ ++R + P ++ A E ++APLA LG+ Q+K ELE+ F Y + +Y ++ + + + + E +EE Sbjct: 60 VEMVEILSTLSMDIDTLRAALLFP-LADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTD-SVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEE 231
BLAST of CX296846 vs. ExPASy Swiss-Prot
Match: RELA_ECOL6 (GTP pyrophosphokinase OS=Escherichia coli O6 GN=relA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.478e-19 Identity = 53/174 (30.46%), Postives = 101/174 (58.05%), Query Frame = 3 Query: 141 VEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEE 662 VE+ IL L +D +++ A LL + D NVV+ + + E G +V ++ G ++ + +LK + + SV + D++R+M LAM ++ R +++KLA+R+ ++R + P ++ A E ++APLA LG+ Q+K ELE+ F Y + +Y ++ + + + + E +EE Sbjct: 60 VEMVEILSTLSMDIDTLRAALLFP-LADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTD-SVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEE 231
BLAST of CX296846 vs. ExPASy Swiss-Prot
Match: RELA_ECO57 (GTP pyrophosphokinase OS=Escherichia coli O157:H7 GN=relA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.478e-19 Identity = 53/174 (30.46%), Postives = 101/174 (58.05%), Query Frame = 3 Query: 141 VEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEE 662 VE+ IL L +D +++ A LL + D NVV+ + + E G +V ++ G ++ + +LK + + SV + D++R+M LAM ++ R +++KLA+R+ ++R + P ++ A E ++APLA LG+ Q+K ELE+ F Y + +Y ++ + + + + E +EE Sbjct: 60 VEMVEILSTLSMDIDTLRAALLFP-LADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTD-SVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEE 231
BLAST of CX296846 vs. ExPASy Swiss-Prot
Match: RELA_PHOAS (GTP pyrophosphokinase OS=Photobacterium angustum (strain S14 / CCUG 15956) GN=relA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.293e-19 Identity = 48/162 (29.63%), Postives = 98/162 (60.49%), Query Frame = 3 Query: 144 EVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVAD 629 E+ IL L +D +++ A LL+ VE T + ++EE+ T+ +V+G ++ + +LK E + Q + D++R+M L+M ++ R +++KLA+R+ N+R + P + + A E ++APLA LG+ Q+K E+E+ +F Y + + Y ++ +++++ Sbjct: 60 ELVEILVTLSMDADTLIAALLYPLVEGGCYST-DALKEEYSGTILHLVQGVEQMCAISQLKSTAEE-TAQAAQVDNIRRMLLSMVDDFRCVVIKLAERICNLREVKDQPDEVRRAAAQECANIYAPLANRLGIGQLKWEIEDYAFRYQHPDTYKQIAKQLSE 219
BLAST of CX296846 vs. ExPASy Swiss-Prot
Match: RELA_HAEIN (GTP pyrophosphokinase OS=Haemophilus influenzae GN=relA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.617e-19 Identity = 56/174 (32.18%), Postives = 100/174 (57.47%), Query Frame = 3 Query: 141 VEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIAT-ETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELE 659 VE+ IL EL +D E++ +L V + + +E ++E+FGA + ++++G ++ + +L N +HS ++ D++R+M LAM ++ R +I+KLA+R+ +R H + +A E ++APLA LG+ Q+K ELE+ F Y + E Y R +A L +E + E Sbjct: 63 VEMVEILHELNMDAETLLTAMLFPIVAN-KLTDWESLKEKFGAKITKLLKGVLEMDNIRQL---NASHSANALQVDNVRRMLLAMVDDFRCVIIKLAERITFLRDAEHRCAEEDKVLAVKECSYIYAPLANRLGIGQLKWELEDYCFRYLHPEQY----RAIAKLLQERRLDRE 228
BLAST of CX296846 vs. ExPASy Swiss-Prot
Match: HDDC3_DANRE (HD domain-containing protein 3 OS=Danio rerio GN=hddc3 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.440e-14 Identity = 58/141 (41.13%), Postives = 77/141 (54.61%), Query Frame = 3 Query: 81 AFEAHDGQKRRS--GEPFIIHPVEVARIL---GELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSS 488 A E H Q+ + G P+I HP+ VARIL GE+ D E I A LLHDTVEDT+ TFE +E FGATV RIV+G T L K + + + Q+ A + +VKLAD+L+N+R L+ P S+ Sbjct: 16 AAEKHRNQRHKDPEGTPYINHPIGVARILSHEGEIT-DVEVIQAALLHDTVEDTDT-TFEELESVFGATVARIVQGVTDDKSLPKAERERQ-------------QVEHAPHCSHQAKLVKLADKLYNLRDLNRCTPEGWSA 141 The following BLAST results are available for this feature:
BLAST of CX296846 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296846 ID=CX296846; Name=CX296846; organism=Citrus clementina; type=EST; length=757bpback to top |