CX297911
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX297911 vs. ExPASy Swiss-Prot
Match: GLYC_CAEBR (Serine hydroxymethyltransferase OS=Caenorhabditis briggsae GN=mel-32 PE=3 SV=3) HSP 1 Score: 93.5893 bits (231), Expect = 7.491e-19 Identity = 45/98 (45.92%), Postives = 62/98 (63.27%), Query Frame = 2 Query: 26 HITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNN----KDIEALKADVEKFASSFDMPG 307 HI NKN GD SAL PGG+R+GTPA+TSRG E+DFE++G+F+H V + + E GK LKDF N +++ L VE+F+ F++PG Sbjct: 410 HIACNKNTCPGDVSALRPGGIRLGTPALTSRGFKEQDFEKVGDFIHEGVQIAKKYNAEAGKTLKDFKAFTATNEQFKQEVAELAKRVEEFSGKFEIPG 507
BLAST of CX297911 vs. ExPASy Swiss-Prot
Match: GLYC_BOVIN (Serine hydroxymethyltransferase, cytosolic OS=Bos taurus GN=SHMT1 PE=2 SV=3) HSP 1 Score: 93.5893 bits (231), Expect = 7.491e-19 Identity = 48/99 (48.48%), Postives = 68/99 (68.69%), Query Frame = 2 Query: 29 ITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYG--KLLKDFNKGLV----NNKDIEALKADVEKFASSFDMPG 307 I NKN GD SAL P G+R+GTPA+TSRGLLE+DF+++ F+HR + LTL+IQ G LK+F + L +++ + AL+A+VE FA+ F +PG Sbjct: 382 IACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEEDFQKVAHFIHRGIELTLQIQDAVGVKATLKEFMEKLAGAEEHHRAVAALRAEVESFATLFPLPG 480
BLAST of CX297911 vs. ExPASy Swiss-Prot
Match: GLYC_SHEEP (Serine hydroxymethyltransferase, cytosolic OS=Ovis aries GN=SHMT1 PE=1 SV=3) HSP 1 Score: 92.4337 bits (228), Expect = 1.669e-18 Identity = 48/99 (48.48%), Postives = 66/99 (66.67%), Query Frame = 2 Query: 29 ITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYG--KLLKDFNKGLV----NNKDIEALKADVEKFASSFDMPG 307 I NKN GD SAL P G+R+GTPA+TSRGLLE+DF ++ F+HR + LTL+IQ G LK+F + L + + + AL+A+VE FA+ F +PG Sbjct: 382 IACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEEDFRKVAHFIHRGIELTLQIQDAVGVKATLKEFMEKLAGAEEHQRAVTALRAEVESFATLFPLPG 480
BLAST of CX297911 vs. ExPASy Swiss-Prot
Match: GLYM_FLAPR (Serine hydroxymethyltransferase 1, mitochondrial OS=Flaveria pringlei PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.180e-18 Identity = 49/109 (44.95%), Postives = 70/109 (64.22%), Query Frame = 2 Query: 23 LHITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKE-YGKLLKDFNKGLVNN---KDIEALKADVEKFASSFDMPGFKMSEMKYKD 337 +HI NKN V GD SA+ PGG+R+GTPA+TSRG +E+DF ++ F AV L ++I+ E G LKDF + ++ +I L+ DVE++A F GF+ MKYK+ Sbjct: 409 VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDLAVKLAVKIKGEAKGTKLKDFVTAMESSAIQSEISKLRHDVEEYAKQFPTIGFEKETMKYKN 517
BLAST of CX297911 vs. ExPASy Swiss-Prot
Match: GLYN_FLAPR (Serine hydroxymethyltransferase 2, mitochondrial OS=Flaveria pringlei PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.282e-18 Identity = 48/109 (44.04%), Postives = 69/109 (63.30%), Query Frame = 2 Query: 23 LHITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKE-YGKLLKDFNKGLVNN---KDIEALKADVEKFASSFDMPGFKMSEMKYKD 337 +HI NKN V GD SA+ PGG+R+GTPA+TSRG +E+DF ++ AV L ++I+ E G LKDF + ++ +I L+ DVE++A F GF+ MKYK+ Sbjct: 409 VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYLFDLAVKLAVKIKGEAQGTKLKDFVAAMQSSAFQSEISKLRHDVEEYAKQFPTIGFEKETMKYKN 517
BLAST of CX297911 vs. ExPASy Swiss-Prot
Match: GLYM_BOVIN (Serine hydroxymethyltransferase, mitochondrial OS=Bos taurus GN=SHMT2 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.847e-15 Identity = 44/98 (44.90%), Postives = 61/98 (62.24%), Query Frame = 2 Query: 29 ITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKAD----VEKFASSFDMPGF 310 IT NKN GD SA+ PGG+R+G PA+TSRG LE DF ++ F+ V + LE++ + K L+DF L+ + + AD VE+FA +F MPGF Sbjct: 405 ITANKNTCPGDRSAITPGGLRLGAPALTSRGFLEDDFRKVVGFIDEGVNIGLEVKSKTTK-LQDFKSFLLKDPETSHQLADLRQRVEQFARAFPMPGF 501
BLAST of CX297911 vs. ExPASy Swiss-Prot
Match: GLYC_NEUCR (Serine hydroxymethyltransferase, cytosolic OS=Neurospora crassa GN=for PE=3 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 8.571e-15 Identity = 48/100 (48.00%), Postives = 63/100 (63.00%), Query Frame = 2 Query: 23 LHITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQ----KEYGKLLKDFNKGLVNN--KDIEALKADVEKFASSFDMP 304 ++IT NKNAV GD SAL PGG+RIGTPAMTSRG E DFE++ F+ AV L EIQ KE K KDF + + I LK ++ ++++F +P Sbjct: 372 INITCNKNAVPGDKSALTPGGLRIGTPAMTSRGFGEADFEKVAVFVDEAVKLCKEIQASLPKEANK-QKDFKAKIATSDIPRINELKQEIAAWSNTFPLP 470
BLAST of CX297911 vs. ExPASy Swiss-Prot
Match: GLYM_HUMAN (Serine hydroxymethyltransferase, mitochondrial OS=Homo sapiens GN=SHMT2 PE=1 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 3.257e-14 Identity = 41/98 (41.84%), Postives = 61/98 (62.24%), Query Frame = 2 Query: 29 ITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKD----IEALKADVEKFASSFDMPGF 310 IT NKN GD SA+ PGG+R+G PA+TSR E DF ++ +F+ V + LE++ + K L+DF L+ + + + L+ VE+FA +F MPGF Sbjct: 405 ITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLEVKSKTAK-LQDFKSFLLKDSETSQRLANLRQRVEQFARAFPMPGF 501
BLAST of CX297911 vs. ExPASy Swiss-Prot
Match: GLYM_RABIT (Serine hydroxymethyltransferase, mitochondrial OS=Oryctolagus cuniculus GN=SHMT2 PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 4.254e-14 Identity = 41/98 (41.84%), Postives = 61/98 (62.24%), Query Frame = 2 Query: 29 ITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKAD----VEKFASSFDMPGF 310 IT NKN GD SA+ PGG+R+G PA+TSR E DF ++ +F+ V + LE++++ K L+DF L+ + + AD V++FA +F MPGF Sbjct: 405 ITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLEVKRKTAK-LQDFKSFLLKDPETSQHLADLRRRVQQFARAFPMPGF 501
BLAST of CX297911 vs. ExPASy Swiss-Prot
Match: GLYC_CANAL (Serine hydroxymethyltransferase, cytosolic OS=Candida albicans GN=SHM2 PE=1 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 9.476e-14 Identity = 40/97 (41.24%), Postives = 65/97 (67.01%), Query Frame = 2 Query: 23 LHITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGK---LLKDFNKGLVNNKD-IEALKADVEKFASSFDM 301 ++I +NKN++ GD SAL PGGVRIG PAMT+RGL E+DF++I ++ AV E+Q + K LKDF + + + ++A++ ++ ++A SF + Sbjct: 372 INIALNKNSIPGDKSALVPGGVRIGAPAMTTRGLGEEDFKKIVSYIDFAVNYAKEVQSQLPKDANKLKDFKNAVSGDSEKLKAVRDEIYQWAGSFPL 468 The following BLAST results are available for this feature:
BLAST of CX297911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >CX297911 ID=CX297911; Name=CX297911; organism=Citrus clementina; type=EST; length=577bpback to top |