CX297911
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX297911 vs. ExPASy Swiss-Prot
Match: GLYD_SCHPO (Probable serine hydroxymethyltransferase, cytosolic OS=Schizosaccharomyces pombe GN=SPAC24C9.12c PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.601e-13 Identity = 40/99 (40.40%), Postives = 62/99 (62.63%), Query Frame = 2 Query: 23 LHITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGK---LLKDFNKGLVNNK---DIEALKADVEKFASSFDM 301 ++I NKN V D SA +P G+R+GTPAMT+RG E+DF ++ +++ RA+T +QKE K LKDF L + ++ L+ +V ++ASSF + Sbjct: 365 INIVTNKNTVPSDKSAFSPSGIRVGTPAMTTRGFKEQDFVRVVDYIDRALTFAANLQKELPKDANKLKDFKAKLGEGEQYPELVQLQKEVAEWASSFPL 463
BLAST of CX297911 vs. ExPASy Swiss-Prot
Match: GLYM_CANAL (Serine hydroxymethyltransferase, mitochondrial OS=Candida albicans GN=SHM1 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.022e-13 Identity = 39/99 (39.39%), Postives = 62/99 (62.63%), Query Frame = 2 Query: 26 HITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQ-KEYGK----LLKDFNKGLVNNKDIEALKADVEKFASSFDMPG 307 +I NKN V GD SAL P G+R+GTPAMT+RG ++F+++ EF+ +AV + +E++ +E GK LL F K + ++ L +V + S + +PG Sbjct: 393 NIAANKNTVPGDVSALFPSGLRVGTPAMTTRGFGPEEFDKVAEFIDQAVNIAIELKAQEQGKVPKELLASFKKLADESDKVKQLDKEVVSWVSKYPVPG 491
BLAST of CX297911 vs. ExPASy Swiss-Prot
Match: GLYM_CANGA (Serine hydroxymethyltransferase, mitochondrial OS=Candida glabrata GN=SHM1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.048e-12 Identity = 35/102 (34.31%), Postives = 61/102 (59.80%), Query Frame = 2 Query: 23 LHITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQ-------KEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDMPG 307 ++I NKN + GD SAL P G+R+GTPAMT+RG E+DF+++ E++ AV L++ ++ K+ L F + ++ ++ L +V + +F +PG Sbjct: 382 INIAANKNTIPGDKSALFPSGLRVGTPAMTTRGFQEQDFKKVAEYIDNAVKLSIALKSQESADAKDVRSKLNSFKQLCDQSEPVQKLAEEVSSWVGTFPVPG 483
BLAST of CX297911 vs. ExPASy Swiss-Prot
Match: GLYC_ASHGO (Serine hydroxymethyltransferase, cytosolic OS=Ashbya gossypii GN=SHM2 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.048e-12 Identity = 40/98 (40.82%), Postives = 60/98 (61.22%), Query Frame = 2 Query: 23 LHITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGK---LLKDFNKGLVNNKD-IEALKADVEKFASSFDMP 304 ++I +NKN++ GD SAL PGGVRIG PAMT+RG+ E+DF +I +++RAV + IQ+ K LKDF + D I L ++ + + +P Sbjct: 371 INIALNKNSIPGDKSALVPGGVRIGAPAMTTRGMGEEDFARIVGYINRAVEIARSIQQSLPKEANRLKDFKAKVEGGTDEIAQLAQEIYSWTEEYPLP 468
BLAST of CX297911 vs. ExPASy Swiss-Prot
Match: GLYC_YEAST (Serine hydroxymethyltransferase, cytosolic OS=Saccharomyces cerevisiae GN=SHM2 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.787e-12 Identity = 37/97 (38.14%), Postives = 61/97 (62.89%), Query Frame = 2 Query: 23 LHITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGK---LLKDFNKGLVNNKDI-EALKADVEKFASSFDM 301 ++I +NKN++ GD SAL PGGVRIG PAMT+RG+ E+DF +I +++++AV ++Q+ K LKDF + D+ K ++ +A + + Sbjct: 371 INIALNKNSIPGDKSALVPGGVRIGAPAMTTRGMGEEDFHRIVQYINKAVEFAQQVQQSLPKDACRLKDFKAKVDEGSDVLNTWKKEIYDWAGEYPL 467
BLAST of CX297911 vs. ExPASy Swiss-Prot
Match: GLYM_NEUCR (Putative serine hydroxymethyltransferase, mitochondrial OS=Neurospora crassa GN=NCU05805 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.048e-12 Identity = 40/107 (37.38%), Postives = 60/107 (56.07%), Query Frame = 2 Query: 29 ITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQK------------EYGKLLKDFNKGLVNNK---DIEALKADVEKFASSFDMP 304 + NKN V GD SAL PGG+RIGTPAMT+RG E+DF ++ + + RAVT+ + I K + +K F L N + +I L+++VE + ++ P Sbjct: 416 VAANKNTVPGDKSALTPGGLRIGTPAMTTRGFTEEDFARVADIIDRAVTIAVRINKAAKEDAVKKGNEKAANRVKTFMDYLGNGETDPEIVQLRSEVESWVGTYPCP 522
BLAST of CX297911 vs. ExPASy Swiss-Prot
Match: GLYC_SCHPO (Probable serine hydroxymethyltransferase, cytosolic OS=Schizosaccharomyces pombe GN=shm2 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.981e-12 Identity = 44/102 (43.14%), Postives = 60/102 (58.82%), Query Frame = 2 Query: 23 LHITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQ----KEYGKLLKDFNKGLVNN----KDIEALKADVEKFASSFDMP 304 ++I+ NKN V GD SAL P G+R+GTPA T+RG EKDFE++ E + V+LT +I KE +DF K V + +I LK +V +A FD P Sbjct: 371 VNISANKNTVPGDKSALIPRGLRLGTPACTTRGFDEKDFERVVELIDEVVSLTKKINEAALKEGKSKFRDF-KAYVGDGSKFSEIAKLKKEVITWAGKFDFP 471
BLAST of CX297911 vs. ExPASy Swiss-Prot
Match: GLYM_YEAST (Serine hydroxymethyltransferase, mitochondrial OS=Saccharomyces cerevisiae GN=SHM1 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 8.869e-12 Identity = 38/102 (37.25%), Postives = 59/102 (57.84%), Query Frame = 2 Query: 23 LHITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL-----TLE--IQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDMPG 307 L+I NKN + GD SAL P G+RIGTPAMT+RG ++F Q+ +++ AV L TLE + + L +F K + ++ AL ++ K+ + +PG Sbjct: 387 LNIAANKNTIPGDKSALFPSGLRIGTPAMTTRGFGREEFSQVAKYIDSAVKLAENLKTLEPTTKLDARSRLNEFKKLCNESSEVAALSGEISKWVGQYPVPG 488
BLAST of CX297911 vs. ExPASy Swiss-Prot
Match: GLYM_KLULA (Serine hydroxymethyltransferase, mitochondrial OS=Kluyveromyces lactis GN=SHM1 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.976e-11 Identity = 36/102 (35.29%), Postives = 58/102 (56.86%), Query Frame = 2 Query: 23 LHITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKD-------IEALKADVEKFASSFDMPG 307 ++I NKN + GD SAL P G+R+GTPAMT+RG ++F Q+ ++ RAV L + I+ + KD L + K+ ++ L +V ++ F +PG Sbjct: 395 INIAANKNTIPGDKSALFPSGLRVGTPAMTTRGFGPQEFAQVAAYIDRAVKLAIGIKSQESPDAKDARSKLASFKELCKESDQVKQLADEVYQWVGEFPVPG 496
BLAST of CX297911 vs. ExPASy Swiss-Prot
Match: GLYC_CANGA (Serine hydroxymethyltransferase, cytosolic OS=Candida glabrata GN=SHM2 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.806e-11 Identity = 37/97 (38.14%), Postives = 58/97 (59.79%), Query Frame = 2 Query: 23 LHITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGK---LLKDFNKGLVNNKD-IEALKADVEKFASSFDM 301 ++I +NKN++ GD SAL PGGVRIG PAMT+RG+ E+DF +I ++ +AV + Q K LKDF + D + LK ++ + + + + Sbjct: 371 INIALNKNSIPGDKSALVPGGVRIGAPAMTTRGMGEEDFHRIVRYIDQAVKFAEQTQSSLPKEANKLKDFKAKVDEIADQLAPLKKEIYDWTAEYPL 467 The following BLAST results are available for this feature:
BLAST of CX297911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX297911 ID=CX297911; Name=CX297911; organism=Citrus clementina; type=EST; length=577bpback to top |