CX299666
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299666 vs. ExPASy Swiss-Prot
Match: VPP1_XENLA (V-type proton ATPase 116 kDa subunit a isoform 1 OS=Xenopus laevis GN=atp6v0a1 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.423e-29 Identity = 78/185 (42.16%), Postives = 98/185 (52.97%), Query Frame = 2 Query: 8 AFVSVPWMLLPKPFILKMQHQDR-HQG---------------QSYEALQSTDESLQPDTNHDXXXXXXXXXXXXXXXQMIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLLAWXXXXXXXXXXXXXXXXX---ATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSF 505 A + VPWML+ KP IL+ Q+ R H G + E +Q S+ D + Q IHTIE+ LG +SNTASYLRLWALSLAH++LS V + V+ + T+ +LL+ME LSAFLHALRLHWVEF+NKFY G G+KF PFSF Sbjct: 643 AIICVPWMLVLKPLILRRQYLRRKHLGTHNFGGIRVGNGPTEEDAEIIQHDQLSMHSDEEEEFDFGDTVVH------QAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVMHIGLNIRSLGGGIALVFIFSAFATLTIAILLIMEGLSAFLHALRLHWVEFRNKFYMGTGFKFLPFSF 821
BLAST of CX299666 vs. ExPASy Swiss-Prot
Match: VPP3_HUMAN (V-type proton ATPase 116 kDa subunit a isoform 3 OS=Homo sapiens GN=TCIRG1 PE=1 SV=3) HSP 1 Score: 126.331 bits (316), Expect = 1.570e-28 Identity = 82/188 (43.62%), Postives = 96/188 (51.06%), Query Frame = 2 Query: 5 LAFVSVPWMLLPKPFILKMQHQ--------DRHQGQSYEALQSTDESLQPDTNH-------DXXXXXXXXXXXXXXXQMIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLLAWXXXXXXXXXXXXXXXXXA-----TVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSFA 508 LA VP +LL P L +H+ DR + L D S+ ++ D Q IHTIEF LG VSNTASYLRLWALSLAH++LS V + V+ + A TV +LLVME LSAFLHALRLHWVEFQNKFY G GYK SPF+FA Sbjct: 639 LALAMVPILLLGTPLHLLHRHRRRLRRRPADRQEENKAGLLDLPDASVNGWSSDEEKAGGLDDEEEAELVPSEVLMHQAIHTIEFCLGCVSNTASYLRLWALSLAHAQLSEVLWAMVMRIGLGLGREVGVAAVVLVPIFAAFAVMTVAILLVMEGLSAFLHALRLHWVEFQNKFYSGTGYKLSPFTFA 826
BLAST of CX299666 vs. ExPASy Swiss-Prot
Match: VPP1_CAEEL (Probable V-type proton ATPase 116 kDa subunit a OS=Caenorhabditis elegans GN=unc-32 PE=2 SV=3) HSP 1 Score: 122.865 bits (307), Expect = 1.736e-27 Identity = 77/189 (40.74%), Postives = 99/189 (52.38%), Query Frame = 2 Query: 5 LAFVSVPWMLLPKPFILKMQHQDRHQGQSYEALQSTDESLQPDTNHDXXXXXXXXXXXXXXX-------------------QMIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLLAWXXXXXXXXXXXXXXXXX---ATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSF 505 LA V VP ML KP+ L + + + + + A + +S++ D N D Q IHTIEFVLG VS+TASYLRLWALSLAH++LS V + V A+ +V +L++ME LSAFLHALRLHWVEFQ+KFY G GY+F+PFSF Sbjct: 703 LALVQVPIMLFAKPYFLYRRDKQQSRYSTLTAESNQHQSVRADINQDDAEVVHAPEQTPKPSGHGHGHGDGPLEMGDVMVYQAIHTIEFVLGCVSHTASYLRLWALSLAHAQLSDVLWTMVFRNAFVLDGYTGAIATYILFFIFGSLSVFILVLMEGLSAFLHALRLHWVEFQSKFYGGLGYEFAPFSF 891
BLAST of CX299666 vs. ExPASy Swiss-Prot
Match: VPH1_SCHPO (V-type proton ATPase subunit a OS=Schizosaccharomyces pombe GN=vph1 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.528e-26 Identity = 71/176 (40.34%), Postives = 94/176 (53.41%), Query Frame = 2 Query: 8 AFVSVPWMLLPKPFILKMQHQDRHQGQSYEALQS-------TDESLQPDTNHDXXXXXXXXXXXXXXXQMIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLLAW---XXXXXXXXXXXXXXXXXATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSF 505 A + VPW+L+ KPF+L +H + Y++L S D + D+ Q+IHTIEF LG VS+TASYLRLWALSLAH++LSSV + L + AT VL+ ME SA LH+LRLHWVE +K +EG+GY F+PF+F Sbjct: 629 ALICVPWLLIVKPFVLWRRHSNEEN--KYQSLNSDLPNVDEADALMAVDSQEKQAEPFELGEVVIH--QVIHTIEFCLGCVSHTASYLRLWALSLAHNQLSSVLWNMTLANGFRMTGIVGSIFVVILFGFWFIATCVVLVAMEGTSAMLHSLRLHWVEGMSKHFEGEGYAFTPFTF 800
BLAST of CX299666 vs. ExPASy Swiss-Prot
Match: VPP2_HUMAN (V-type proton ATPase 116 kDa subunit a isoform 2 OS=Homo sapiens GN=ATP6V0A2 PE=1 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 1.053e-24 Identity = 59/109 (54.13%), Postives = 73/109 (66.97%), Query Frame = 2 Query: 191 QMIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVL---LLAWXXXXXXXXXXXXXXXXXATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSFA 508 Q+IH+IE+ LG +SNTASYLRLWALSLAH++LS V + ++ L T+ +LL+ME LSAFLHA+RLHWVEFQNKFY G G KF PFSF+ Sbjct: 735 QVIHSIEYCLGCISNTASYLRLWALSLAHAQLSDVLWAMLMRVGLRVDTTYGVLLLLPVIALFAVLTIFILLIMEGLSAFLHAIRLHWVEFQNKFYVGAGTKFVPFSFS 843
BLAST of CX299666 vs. ExPASy Swiss-Prot
Match: VPP2_MOUSE (V-type proton ATPase 116 kDa subunit a isoform 2 OS=Mus musculus GN=Atp6v0a2 PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.376e-24 Identity = 60/109 (55.05%), Postives = 72/109 (66.06%), Query Frame = 2 Query: 191 QMIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVL---LLAWXXXXXXXXXXXXXXXXXATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSFA 508 Q IH+IE+ LG +SNTASYLRLWALSLAH++LS V + ++ L T+ +LLVME LSAFLHA+RLHWVEFQNKFY G G KF PFSF+ Sbjct: 735 QAIHSIEYCLGCISNTASYLRLWALSLAHAQLSDVLWAMLMRVGLRVDTTYGVLLLLPVMAFFAVLTIFILLVMEGLSAFLHAIRLHWVEFQNKFYVGAGTKFVPFSFS 843
BLAST of CX299666 vs. ExPASy Swiss-Prot
Match: VPP2_BOVIN (V-type proton ATPase 116 kDa subunit a isoform 2 OS=Bos taurus GN=ATP6V0A2 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.376e-24 Identity = 59/108 (54.63%), Postives = 72/108 (66.67%), Query Frame = 2 Query: 191 QMIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVL---LLAWXXXXXXXXXXXXXXXXXATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSF 505 Q+IH+IE+ LG +SNTASYLRLWALSLAH++LS V + ++ L T+ +LL+ME LSAFLHA+RLHWVEFQNKFY G G KF PFSF Sbjct: 735 QIIHSIEYCLGCISNTASYLRLWALSLAHAQLSEVLWAMLMHVGLRVDTAYGVLVLLPVIAFFAVLTIFILLIMEGLSAFLHAIRLHWVEFQNKFYVGAGTKFVPFSF 842
BLAST of CX299666 vs. ExPASy Swiss-Prot
Match: STV1_YEAST (V-type proton ATPase subunit a, Golgi isoform OS=Saccharomyces cerevisiae GN=STV1 PE=1 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 4.003e-24 Identity = 71/199 (35.68%), Postives = 99/199 (49.75%), Query Frame = 2 Query: 8 AFVSVPWMLLPKPFILK-------------------MQH-----QDRHQGQSYEALQSTDESLQPDTNHDXXXXXXXXXXXXXXX---QMIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLLAWXXXXXXXXXXXXXXXXX------ATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSF 505 A V VPW+LL KP L+ ++H Q RH + ++ + +D + D+ ++ Q+IHTIEF L +S+TASYLRLWALSLAH++LSSV ++ + A+ TV +L+ ME SA LHALRLHWVE +KF+EG+GY + PFSF Sbjct: 687 ALVCVPWLLLYKPLTLRRLNKNGGGGRPHGYQSVGNIEHEEQIAQQRHSAEGFQGMIISDVASVADSINESVGGGEQGPFNFGDVMIHQVIHTIEFCLNCISHTASYLRLWALSLAHAQLSSVLWDMTISNAFSSKNSGSPLAVMKVVFLFAMWFVLTVCILVFMEGTSAMLHALRLHWVEAMSKFFEGEGYAYEPFSF 885
BLAST of CX299666 vs. ExPASy Swiss-Prot
Match: VPH1_YEAST (V-type proton ATPase subunit a, vacuolar isoform OS=Saccharomyces cerevisiae GN=VPH1 PE=1 SV=3) HSP 1 Score: 108.227 bits (269), Expect = 4.426e-23 Identity = 69/187 (36.90%), Postives = 94/187 (50.27%), Query Frame = 2 Query: 5 LAFVSVPWMLLPKPFILKMQHQDRHQGQSYEALQSTD-----ESLQP------------DTNHDXXXXXXXXXXXXXXXQMIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLLAW---XXXXXXXXXXXXXXXXXATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSF 505 +A V +PW+LL KP K H+ + S+E L ST+ E L+ + Q+IHTIEF L VS+TASYLRLWALSLAH++LSSV + + +A+ T VL++ME SA LH+LRLHWVE +KF+ G+G + PF+F Sbjct: 640 MALVCIPWLLLVKPLHFKFTHKKK----SHEPLPSTEADASSEDLEAQQLISAMDADDAEEEEVGSGSHGEDFGDIMIHQVIHTIEFCLNCVSHTASYLRLWALSLAHAQLSSVLWTMTIQIAFGFRGFVGVFMTVALFAMWFALTCAVLVLMEGTSAMLHSLRLHWVESMSKFFVGEGLPYEPFAF 822
BLAST of CX299666 vs. ExPASy Swiss-Prot
Match: VPH1_NEUCR (V-type proton ATPase subunit a OS=Neurospora crassa GN=vph-1 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.273e-19 Identity = 66/191 (34.55%), Postives = 95/191 (49.74%), Query Frame = 2 Query: 5 LAFVSVPWMLLPKPFILKMQHQDRHQGQSYEAL------QSTDESLQPDTN---------------HDXXXXXXXXXXXXXXXQMIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVL---LLAWXXXXXXXXXXXXXXXXXATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSF 505 LA + VP +L KPF L+ ++ +R + + Y + + DE + D + H Q+IHTIEF L +VS+TASYLRLWALSLAH +LS+V + + L + +V +L++ME +SA LH+LRL WVE +KF E G+ F+PFSF Sbjct: 652 LAVIQVPILLFLKPFYLRWEN-NRARAKGYRGIGERSRVSALDEDDEEDPSNGDDYEGAAMLTHDEHGDGEHEEFEFGEVMIHQVIHTIEFCLNSVSHTASYLRLWALSLAHQQLSAVLWSMTMAKALESKGLGGAIFLVVAFAMFFVLSVIILIIMEGVSAMLHSLRLAWVESFSKFAEFGGWPFTPFSF 841 The following BLAST results are available for this feature:
BLAST of CX299666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX299666 ID=CX299666; Name=CX299666; organism=Citrus clementina; type=EST; length=709bpback to top |