CX299666
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299666 vs. ExPASy Swiss-Prot
Match: VATM_DICDI (Vacuolar proton translocating ATPase 100 kDa subunit OS=Dictyostelium discoideum GN=vatM PE=1 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 2.502e-34 Identity = 83/166 (50.00%), Postives = 101/166 (60.84%), Query Frame = 2 Query: 5 LAFVSVPWMLLPKPFILKMQHQDRHQGQSYEALQSTDESLQPDTNHDXXXXXXXXXXXXXXXQMIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLLAWXXXXXXXXXXXXXXXXXATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFS 502 LA +S+P ML+ KP +K H Q + L +E + + Q+IHTIEFVLGAVSNTASYLRLWALSLAHSELSSVF+E++L+ A+V VLL+ME+LSAFLHALRLHWVEFQNKFY GDG +F P+S Sbjct: 643 LALISIPVMLVIKPLFMKRFH---FQEVERKKLGHHEEEHDDEALYTGHHGEEFEMGEVFVHQVIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFWERILIGQVERGNPFLAFVGFGAWLGASVAVLLLMESLSAFLHALRLHWVEFQNKFYIGDGVRFIPYS 805
BLAST of CX299666 vs. ExPASy Swiss-Prot
Match: VPP4_HUMAN (V-type proton ATPase 116 kDa subunit a isoform 4 OS=Homo sapiens GN=ATP6V0A4 PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.278e-34 Identity = 84/186 (45.16%), Postives = 104/186 (55.91%), Query Frame = 2 Query: 5 LAFVSVPWMLLPKPFILKMQHQDRHQGQSYEALQSTDESLQPDTNHD----------------XXXXXXXXXXXXXXXQMIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVL---LLAWXXXXXXXXXXXXXXXXXATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSF 505 +A +SVPWMLL KPFIL+ H+ + Q Q+ + E+++ D++ Q IHTIE+ LG +SNTASYLRLWALSLAH++LS V + V+ L TV +LL+ME LSAFLHALRLHWVEFQNKFY GDGYKFSPFSF Sbjct: 646 MALISVPWMLLIKPFILRASHR-KSQLQASRIQEDATENIEGDSSSPSSRSGQRTSADTHGALDDHGEEFNFGDVFVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVMNSGLQTRGWGGIVGVFIIFAVFAVLTVAILLIMEGLSAFLHALRLHWVEFQNKFYVGDGYKFSPFSF 830
BLAST of CX299666 vs. ExPASy Swiss-Prot
Match: VPP4_MOUSE (V-type proton ATPase 116 kDa subunit a isoform 4 OS=Mus musculus GN=Atp6v0a4 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.621e-33 Identity = 90/181 (49.72%), Postives = 103/181 (56.91%), Query Frame = 2 Query: 5 LAFVSVPWMLLPKPFILKMQHQDRHQGQSY-------EALQSTDESLQPDTNHDXXXXXXXXXXXXXXX--QMIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVL-----LLAWXXXXXXXXXXXXXXXXXATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSF 505 +A VSVPWMLL KPF+L+ +HQ + Q QS+ E S S + H Q IHTIE+ LG +SNTASYLRLWALSLAH+ELS V + V+ L W TV +LLVME LSAFLHALRLHWVEFQNKFYEG G KFSPFSF Sbjct: 646 IALVSVPWMLLIKPFVLRAKHQ-KSQLQSFTIHEDAVEGDHSGHSSKKTAGAHGMKDGHEEEFNFGDIFVHQAIHTIEYCLGCISNTASYLRLWALSLAHAELSEVLWTMVMSIGLRLQGWAGLVGVFIIFAVFAVL--TVAILLVMEGLSAFLHALRLHWVEFQNKFYEGAGSKFSPFSF 823
BLAST of CX299666 vs. ExPASy Swiss-Prot
Match: VPP1_XENTR (V-type proton ATPase 116 kDa subunit a isoform 1 OS=Xenopus tropicalis GN=atp6v0a1 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.532e-31 Identity = 79/185 (42.70%), Postives = 98/185 (52.97%), Query Frame = 2 Query: 8 AFVSVPWMLLPKPFILKMQHQDR-HQG---------------QSYEALQSTDESLQPDTNHDXXXXXXXXXXXXXXXQMIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVL---LLAWXXXXXXXXXXXXXXXXXATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSF 505 A + VPWML+ KP IL+ Q+ R H G + E +Q S+ + + Q IHTIE+ LG +SNTASYLRLWALSLAH++LS V + V+ L T+ +LL+ME LSAFLHALRLHWVEFQNKFY G G+KF PFSF Sbjct: 643 AIICVPWMLVVKPLILRRQYLRRKHLGTHNFGGIRVGNGPTEEDAEIIQHDQLSMHSEEGEEPAMEEVFDFGDTVVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVMHVGLSIRSLGGGIALVFVFSAFATLTIAILLIMEGLSAFLHALRLHWVEFQNKFYMGTGFKFLPFSF 827
BLAST of CX299666 vs. ExPASy Swiss-Prot
Match: VPP1_CHICK (V-type proton ATPase 116 kDa subunit a isoform 1 OS=Gallus gallus GN=ATP6V0A1 PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.285e-30 Identity = 79/186 (42.47%), Postives = 98/186 (52.69%), Query Frame = 2 Query: 5 LAFVSVPWMLLPKPFILKMQHQDR-HQG---------------QSYEALQSTDESLQPDTNHDXXXXXXXXXXXXXXXQMIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVL---LLAWXXXXXXXXXXXXXXXXXATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSF 505 +A + VPWML+ KP +L+ Q+ R H G + E +Q S + + Q IHTIE+ LG +SNTASYLRLWALSLAH++LS V + V+ L TV +LLVME LSAFLHALRLHW+EFQNKFY G G+KF PFSF Sbjct: 643 VALLCVPWMLVAKPLVLRHQYLRRKHLGTHNFGGIRVGNGPTEEDAEIIQHDQLSTHSEEGEEPTEDEVFDFADTVVYQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVIHTGLSVRSLAGGFGLVFIFAAFATLTVAILLVMEGLSAFLHALRLHWIEFQNKFYTGTGFKFLPFSF 828
BLAST of CX299666 vs. ExPASy Swiss-Prot
Match: VPP1_BOVIN (V-type proton ATPase 116 kDa subunit a isoform 1 OS=Bos taurus GN=ATP6V0A1 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.285e-30 Identity = 80/186 (43.01%), Postives = 98/186 (52.69%), Query Frame = 2 Query: 5 LAFVSVPWMLLPKPFILKMQHQDR-HQG---------------QSYEALQSTDESLQPDTNHDXXXXXXXXXXXXXXXQMIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVL---LLAWXXXXXXXXXXXXXXXXXATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSF 505 +A + VPWMLL KP +L+ Q+ R H G + E +Q S + + Q IHTIE+ LG +SNTASYLRLWALSLAH++LS V + V+ L TV +LL+ME LSAFLHALRLHWVEFQNKFY G G+KF PFSF Sbjct: 643 VALLCVPWMLLFKPLVLRRQYLRRKHLGTLNFGGIRVGNGPTEEDAEIIQHDQLSTHSEDAEEPTEDEVFDFGDTMVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVIHIGLKVKSLAGGLALFFIFAAFATLTVAILLIMEGLSAFLHALRLHWVEFQNKFYSGTGFKFLPFSF 828
BLAST of CX299666 vs. ExPASy Swiss-Prot
Match: VPP1_RAT (V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus GN=Atp6v0a1 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.678e-30 Identity = 80/186 (43.01%), Postives = 99/186 (53.23%), Query Frame = 2 Query: 5 LAFVSVPWMLLPKPFILKMQH-QDRHQG---------------QSYEALQSTDESLQPDTNHDXXXXXXXXXXXXXXXQMIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVL---LLAWXXXXXXXXXXXXXXXXXATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSF 505 +A + VPWMLL KP IL+ Q+ + +H G + E +Q S + + Q IHTIE+ LG +SNTASYLRLWALSLAH++LS V + V+ L TV +LL+ME LSAFLHALRLHWVEFQNKFY G G+KF PFSF Sbjct: 643 VAMLCVPWMLLFKPLILRHQYLRKKHLGTLNFGGIRVGNGPTEEDAEIIQHDQLSTHSEDAEEPTEDEVFDFGDTMVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVIHIGLHVRSLAGGLGLFFIFAAFATLTVAILLIMEGLSAFLHALRLHWVEFQNKFYTGTGFKFLPFSF 828
BLAST of CX299666 vs. ExPASy Swiss-Prot
Match: VPP1_PONAB (V-type proton ATPase 116 kDa subunit a isoform 1 OS=Pongo abelii GN=ATP6V0A1 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.678e-30 Identity = 80/186 (43.01%), Postives = 98/186 (52.69%), Query Frame = 2 Query: 5 LAFVSVPWMLLPKPFILKMQHQDR-HQG---------------QSYEALQSTDESLQPDTNHDXXXXXXXXXXXXXXXQMIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVL---LLAWXXXXXXXXXXXXXXXXXATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSF 505 +A + VPWMLL KP +L+ Q+ R H G + E +Q S + + Q IHTIE+ LG +SNTASYLRLWALSLAH++LS V + V+ L TV +LL+ME LSAFLHALRLHWVEFQNKFY G G+KF PFSF Sbjct: 642 VALLCVPWMLLFKPLVLRRQYLRRKHLGTLNFGGIRVGNGPTEEDAEIIQHDQLSTHSEDADEPTEDEVFDFGATMVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVIHIGLSVKSLAGGLVLFFFFTAFATLTVAILLIMEGLSAFLHALRLHWVEFQNKFYSGTGFKFLPFSF 827
BLAST of CX299666 vs. ExPASy Swiss-Prot
Match: VPP1_HUMAN (V-type proton ATPase 116 kDa subunit a isoform 1 OS=Homo sapiens GN=ATP6V0A1 PE=1 SV=3) HSP 1 Score: 132.88 bits (333), Expect = 1.678e-30 Identity = 80/186 (43.01%), Postives = 98/186 (52.69%), Query Frame = 2 Query: 5 LAFVSVPWMLLPKPFILKMQHQDR-HQG---------------QSYEALQSTDESLQPDTNHDXXXXXXXXXXXXXXXQMIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVL---LLAWXXXXXXXXXXXXXXXXXATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSF 505 +A + VPWMLL KP +L+ Q+ R H G + E +Q S + + Q IHTIE+ LG +SNTASYLRLWALSLAH++LS V + V+ L TV +LL+ME LSAFLHALRLHWVEFQNKFY G G+KF PFSF Sbjct: 642 VALLCVPWMLLFKPLVLRRQYLRRKHLGTLNFGGIRVGNGPTEEDAEIIQHDQLSTHSEDADEPSEDEVFDFGDTMVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVIHIGLSVKSLAGGLVLFFFFTAFATLTVAILLIMEGLSAFLHALRLHWVEFQNKFYSGTGFKFLPFSF 827
BLAST of CX299666 vs. ExPASy Swiss-Prot
Match: VPP1_MOUSE (V-type proton ATPase 116 kDa subunit a isoform 1 OS=Mus musculus GN=Atp6v0a1 PE=1 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 1.088e-29 Identity = 80/180 (44.44%), Postives = 101/180 (56.11%), Query Frame = 2 Query: 5 LAFVSVPWMLLPKPFILKMQH-QDRHQGQ-SYEALQSTDESLQPDT---NHD-----XXXXXXXXXXXXXXXQMIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVL---LLAWXXXXXXXXXXXXXXXXXATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSF 505 +A + VPWMLL KP IL+ Q+ + +H G ++ ++ + + D HD Q IHTIE+ LG +SNTASYLRLWALSLAH++LS V + V+ L TV +LL+ME LSAFLHALRLHWVEFQNKFY G G+KF PFSF Sbjct: 650 VAMLCVPWMLLFKPLILRHQYLRKKHLGTLNFGGIRVGNGPTEEDAEIIQHDQLSTHSEDAEEFDFGDTMVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVIHIGLHVRSLAGGLGLFFIFAAFATLTVAILLIMEGLSAFLHALRLHWVEFQNKFYTGTGFKFLPFSF 829 The following BLAST results are available for this feature:
BLAST of CX299666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299666 ID=CX299666; Name=CX299666; organism=Citrus clementina; type=EST; length=709bpback to top |