CX300085
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300085 vs. ExPASy Swiss-Prot
Match: GP2_SOLLC (Polygalacturonase non-catalytic subunit AroGP2 OS=Solanum lycopersicum GN=GP2 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 8.376e-23 Identity = 56/154 (36.36%), Postives = 84/154 (54.55%), Query Frame = 1 Query: 1 EIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSVQAISTEVKKGTKMQTYTIAA-GVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAK---AAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVW 450 +++ + + ECE GE K C S E MIDF+TS LG++V +TE G+K + G+ KSV CH+ YP ++YCH+ R Y + + +KAK A+CH DTS+W P+H AF L PG + +CH++ E+ + W Sbjct: 473 KMIGDALSECERAPSPGETKQCVNSAEDMIDFATSVLGRNVVVRTTENTNGSKGNIMIGSIKGINGGKVTKSVSCHQTLYPSLLYYCHSVPKVRVYEADILDPN-SKAKINHGVAICHVDTSSWGPRHGAFIALGSGPGKIEVCHWIFENDMTW 625
BLAST of CX300085 vs. ExPASy Swiss-Prot
Match: BURPB_ORYSJ (BURP domain-containing protein 11 OS=Oryza sativa subsp. japonica GN=BURP11 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.429e-22 Identity = 67/175 (38.29%), Postives = 88/175 (50.29%), Query Frame = 1 Query: 43 IKGEQKYCATSLESMIDFSTSKLG-KSVQAIS----------TEVKKG----TKMQTYTIAAGVKQMAADKS-----VVCHKQNYPYAVFYCHATQTTRAYMVPL------------EGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPNKKTG 471 + GE+ CATSLES+ D + S LG + V+A S T ++G T ++ + AG ++ + V CH YPYAVFYCH+T+ T AY V L E A K +A AVCH DTS W + F VKPG V +CHFL + IVWVP + G Sbjct: 148 LPGEKAGCATSLESLADLAASLLGTRDVRAFSAADLPTDAATTPARRGRYNVTSVRELSAMAGSGSSSSSEPAPAAVVACHDLTYPYAVFYCHSTKPTAAYAVTLVAATTGDGDGEGEAASPAKMEALAVCHLDTSRWRADNPFFVAHGVKPGEVSVCHFLTKLSIVWVPRHEQG 322
BLAST of CX300085 vs. ExPASy Swiss-Prot
Match: BURP2_ORYSJ (BURP domain-containing protein 2 OS=Oryza sativa subsp. japonica GN=BURP2 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 2.437e-22 Identity = 67/164 (40.85%), Postives = 87/164 (53.05%), Query Frame = 1 Query: 1 EIMQNTIKECEDPGIKGE-----QKYCATSLESMIDFSTSKLG-KSVQAISTEVKKG---TKMQTYTI-AAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHL-AFQVLKVKPGTVPICHFLPEDHIVWVPN 459 + M++T+ CE I E + YCATSLESM++ S LG + V A+STEV T Q Y + A + V CH+ Y YAVF H + AY V L GADGT A+A A CH D A++ L V PG V +CHFLP+D ++WV N Sbjct: 125 DAMRSTLAVCEAARIASETAPKHKHYCATSLESMVELVASSLGTRDVHAVSTEVVNRAGPTPRQAYRVEAVRPVPVPGGDMVACHRMPYAYAVFGVHGIKGA-AYTVTLAGADGTMAEAVAACHGDVDGHGVAVAEAYKRLGVAPGKVAVCHFLPQDDMLWVRN 287
BLAST of CX300085 vs. ExPASy Swiss-Prot
Match: BURP9_ORYSJ (BURP domain-containing protein 9 OS=Oryza sativa subsp. japonica GN=BURP9 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 4.157e-22 Identity = 56/153 (36.60%), Postives = 79/153 (51.63%), Query Frame = 1 Query: 16 TIKECEDPG-IKGEQKYCATSLESMIDFSTSKLG-KSVQAISTEVK-KGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKA---AAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVP 456 T++ CE G + GE+ CATS+ES++D S LG K V+A++ +G Y +A+ + + CH YPY VF+CH + TR Y V L + + AVCH +TS W+ H F + VKPG CHF I+WVP Sbjct: 354 TLQACEHTGMVHGEKAKCATSIESLLDVVVSSLGTKLVRALTPGAPMEGVPSLRYIVASATPVPNSQSMLACHDMLYPYKVFFCHTPKQTRLYQVSLVSGESGRPLIDGLLAVCHQNTSDWDTGHPFFHFMDVKPGETTACHFFGRGSIIWVP 506
BLAST of CX300085 vs. ExPASy Swiss-Prot
Match: BURPG_ORYSJ (BURP domain-containing protein 16 OS=Oryza sativa subsp. japonica GN=BURP16 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.519e-21 Identity = 55/153 (35.95%), Postives = 74/153 (48.37%), Query Frame = 1 Query: 7 MQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSVQAISTEVKKGTKMQTYT-IAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAK---AAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWV 453 + T+ +C+ KGE K C TS E MIDF+ + LG + ST + G G+ SV CH+ +PY V+YCH+ R Y + TK K A+CH DTSAWN H AF L KPG +CH++ + WV Sbjct: 188 VDETVAQCQSSPSKGETKRCVTSAEDMIDFAVAMLGDDIVVRSTVLPNGPGESIMIGKVKGINGGKITSSVSCHEYLFPYMVYYCHSVPKIRVYEAEILSVQ-TKEKINSGVAICHIDTSAWNAGHPAFVALGGKPGQNKVCHWIFNGSMTWV 339
BLAST of CX300085 vs. ExPASy Swiss-Prot
Match: BURPE_ORYSJ (BURP domain-containing protein 14 OS=Oryza sativa subsp. japonica GN=BURP14 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.746e-20 Identity = 55/158 (34.81%), Postives = 80/158 (50.63%), Query Frame = 1 Query: 1 EIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSVQAISTE--VKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKA--KAAAVCHTDTSAWNPKHLAFQVLKVKPG-----TVPICHFLPEDHIV 447 +++ +T+ EC P +GE K CATS E ++DF+ LG +V A +TE G ++ +A +SV CH+ +PY V+YCH+ T R Y + D + A+CH DTS W+P H AF L KPG T IC + + V Sbjct: 533 QVVSSTVAECARPPSRGETKRCATSAEDVVDFAVEMLGDNVVARATESTAGGGGDVRLGRVAGVPAGGNVTRSVSCHQSLFPYLVYYCHSVPTVRVYEADILAVDSNQKINHGVAICHLDTSDWSPNHGAFIALGGKPGKKVDPTKFICFIMQDGEFV 690
BLAST of CX300085 vs. ExPASy Swiss-Prot
Match: BURP4_ORYSJ (BURP domain-containing protein 4 OS=Oryza sativa subsp. japonica GN=BURP4 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.635e-18 Identity = 54/158 (34.18%), Postives = 83/158 (52.53%), Query Frame = 1 Query: 13 NTIKECED---PGIKGEQKY--CATSLESMIDFSTSKLGKSVQAISTEVKKGTKMQTYTIAA-GVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGT---KAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPN 459 +T++ C + G GE+ CATS E+++DF+ S LG S T + G + + Y +AA GV ++ D V CH Y Y V+YCH A V L A A AVCH +T+ W+ + F++LK G ICH++P+ +++W+ N Sbjct: 325 DTLRACSELTAAGGGGEEPRACCATSREAVLDFAASALGTSAPRAVTTLVHGREPRRYVVAADGVARIGGDAVVACHPMPYLYEVYYCHRPADAVALRVDLHAVADVGLGGATAVAVCHVNTTTWDSAY--FELLKASRGDA-ICHYMPQGYVLWLAN 479 The following BLAST results are available for this feature:
BLAST of CX300085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300085 ID=CX300085; Name=CX300085; organism=Citrus clementina; type=EST; length=506bpback to top |