CX300085
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300085 vs. ExPASy Swiss-Prot
Match: RD22_ARATH (Dehydration-responsive protein RD22 OS=Arabidopsis thaliana GN=RD22 PE=2 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 1.975e-56 Identity = 105/153 (68.63%), Postives = 123/153 (80.39%), Query Frame = 1 Query: 1 EIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGK-SVQAISTEV-KKGTKMQTYTIAA-GVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVW 450 E+M+ TI+ECE + GE+KYCATSLESM+DFS SKLGK V+A+STEV KK MQ Y IAA GVK+++ DKSVVCHKQ YP+AVFYCH T Y VPLEG +G +AKA AVCH +TSAWNP HLAF+VLKVKPGTVP+CHFLPE H+VW Sbjct: 237 EMMKKTIEECEARKVSGEEKYCATSLESMVDFSVSKLGKYHVRAVSTEVAKKNAPMQKYKIAAAGVKKLSDDKSVVCHKQKYPFAVFYCHKAMMTTVYAVPLEGENGMRAKAVAVCHKNTSAWNPNHLAFKVLKVKPGTVPVCHFLPETHVVW 389
BLAST of CX300085 vs. ExPASy Swiss-Prot
Match: BURP3_ORYSJ (BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=BURP3 PE=2 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 2.189e-47 Identity = 93/154 (60.39%), Postives = 115/154 (74.68%), Query Frame = 1 Query: 7 MQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKS-VQAISTEV-KKGTKMQTYTIAAGVKQMAA----DKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVW 450 M T+++CE P +GE+K CATSLESM+DF+TS LG S V+A ST V K+G+ Q YT+ A VK+ AA D+ V CH + Y YAVF CH T+ TRAY V + G DGT +A AVCH DT+ WNPKH+AFQVLKVKPGTVP+CHFLP+DH+VW Sbjct: 273 MAQTLRDCEAPPAQGERKACATSLESMVDFATSSLGTSHVRAASTVVGKEGSPEQEYTVTA-VKRAAAGGDQDQLVACHAEPYAYAVFACHLTRATRAYAVSMAGRDGTGVEAVAVCHADTAGWNPKHVAFQVLKVKPGTVPVCHFLPQDHVVW 425
BLAST of CX300085 vs. ExPASy Swiss-Prot
Match: BURP5_ORYSJ (BURP domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=BURP5 PE=2 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 3.616e-42 Identity = 82/153 (53.59%), Postives = 104/153 (67.97%), Query Frame = 1 Query: 4 IMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLG-KSVQAISTEV--KKG-TKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVW 450 +++NT+ ECE P KGE+K CATSLESM+DF S LG + ++A ST + K G T Q YT+ + + + CH ++YPYAVF CH T+ TRAY L G DG +A AVCHTDT+ WNPKH AFQVL VKPGTVP+CHF+ D +VW Sbjct: 168 VVKNTLLECELPANKGEKKACATSLESMVDFVASSLGTRDIKAASTFLVGKDGDTPAQEYTVTGARRMAETGQLIACHPESYPYAVFMCHLTEATRAYKASLVGKDGAAVEAVAVCHTDTAEWNPKHAAFQVLGVKPGTVPVCHFVQPDVVVW 320
BLAST of CX300085 vs. ExPASy Swiss-Prot
Match: BURPH_ORYSJ (BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica GN=BURP17 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 1.984e-40 Identity = 85/156 (54.49%), Postives = 107/156 (68.59%), Query Frame = 1 Query: 7 MQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKS-VQAIST-----EVKKGTKMQTYTIAAGVKQMAADKSVV-CHKQNYPYAVFYCHATQ-TTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVW 450 M T+++CE P KGE+K CATSLES++DF TS G S V A ST V+ + Q YT++ GV++MA ++ CH ++YPYAVF CH T+ TTRAY L G DGT +A AVCHTDTS WNP+H AF VL VKPGTVP+CHF+ D +VW Sbjct: 427 MSATLQDCELPANKGEKKACATSLESIVDFVTSSFGASDVDAASTVVLSKAVESSSLAQDYTVS-GVRRMAGTGQLIACHPESYPYAVFMCHLTEATTRAYKASLVGKDGTAVEAVAVCHTDTSDWNPEHAAFHVLGVKPGTVPVCHFMQPDAVVW 581
BLAST of CX300085 vs. ExPASy Swiss-Prot
Match: RAF1B_WHEAT (Protein RAFTIN 1B OS=Triticum aestivum GN=RAFTIN1B PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 5.058e-36 Identity = 71/156 (45.51%), Postives = 99/156 (63.46%), Query Frame = 1 Query: 7 MQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLG-KSVQAI-STEVKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKA-AAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPNKK 465 M+ T++ CE P I GE K+CATSLE++++ + LG + ++ + ST + G +QTYT+ A V CH + YPY V+ CH T +RAY V +EGA G A AAVCHTDTS WNP+H++F++L KPG P+CH +P HI+W N K Sbjct: 203 MEATLRACESPTIAGESKFCATSLEALVERAMGVLGTRDIRPVTSTLPRAGAPLQTYTVVAVQPVEGGPVFVACHDEAYPYTVYRCHTTGPSRAYTVDMEGARGADAVTIAAVCHTDTSLWNPEHVSFKLLGTKPGGTPVCHLMPYGHIIWAKNVK 358
BLAST of CX300085 vs. ExPASy Swiss-Prot
Match: RAF1A_WHEAT (Protein RAFTIN 1A OS=Triticum aestivum GN=RAFTIN1A PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 4.282e-35 Identity = 69/154 (44.81%), Postives = 98/154 (63.64%), Query Frame = 1 Query: 7 MQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLG-KSVQAI-STEVKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKA-AAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPN 459 M+ T++ CE P I GE K+CATSLE++++ + LG + ++ + ST + G +QTYT+ + V CH + YPY V+ CH T +RAYMV +EGA G A A VCHTDTS WNP+H++F++L KPG P+CH +P HI+W N Sbjct: 230 MEATLRACESPTIAGESKFCATSLEALVERAMEVLGTRDIRPVTSTLPRAGAPLQTYTVRSVRPVEGGPVFVACHDEAYPYTVYRCHTTGPSRAYMVDMEGARGGDAVTIATVCHTDTSLWNPEHVSFKLLGTKPGGTPVCHLMPYGHIIWAKN 383
BLAST of CX300085 vs. ExPASy Swiss-Prot
Match: BURPD_ORYSJ (BURP domain-containing protein 13 OS=Oryza sativa subsp. japonica GN=BURP13 PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 4.008e-33 Identity = 71/160 (44.38%), Postives = 101/160 (63.12%), Query Frame = 1 Query: 7 MQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLG-KSVQAI-STEVKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEG---ADGTKA-KAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPNKKT 468 M+ T++ CE P + GE K+CATSLE++++ + + LG + + A+ ST + G +Q Y + A V + V CH Q YPY V+ CH T RAYMV +EG DG +A A VCHT+TS WNP+H++F++L KPG P+CH +P HIVW N K+ Sbjct: 251 MRETLRTCEWPTLAGESKFCATSLEALVEGAMAALGTRDIAALASTLPRGGAPLQAYAVRA-VLPVEGAGFVACHDQAYPYTVYRCHTTGPARAYMVEMEGDGGGDGGEAVTVATVCHTNTSRWNPEHVSFKLLGTKPGGSPVCHLMPYGHIVWAKNVKS 409
BLAST of CX300085 vs. ExPASy Swiss-Prot
Match: BURP6_ORYSJ (BURP domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=BURP6 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 4.899e-31 Identity = 75/157 (47.77%), Postives = 98/157 (62.42%), Query Frame = 1 Query: 1 EIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLG-KSVQAISTEVKKG--TKMQTYTI-AAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPN 459 + M++T+ ECE GE K CATSLESM++F+ S LG + V A+STEV + T Q Y + A ++ V CH Y YAVF CH T T AY V L GADGTKA+A A CHTD + + A++ L V PG+VP+CHFLP+D ++WV N Sbjct: 86 DAMRSTLAECEAAPQAGEAKRCATSLESMVEFAASSLGTRDVHAVSTEVDRAGPTPRQAYRVEAVRPVPVSGGDMVACHGMAYAYAVFGCHTT-TAAAYTVTLAGADGTKAEALAACHTDAAPRVAE--AYKRLGVAPGSVPVCHFLPQDDMLWVRN 239
BLAST of CX300085 vs. ExPASy Swiss-Prot
Match: EA92_VICFA (Embryonic abundant protein USP92 OS=Vicia faba PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.803e-25 Identity = 61/145 (42.07%), Postives = 84/145 (57.93%), Query Frame = 1 Query: 28 CEDPGIKGEQKYCATSLESMIDFSTSKLGKS-VQAISTEVKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPN 459 C P E K+C +SL+SMID S G + ++AIS+ Q + VK++ D +V+CH+ N+ VF CH + T AY+V L +DGTK KA VCH DT NP+ L ++ L+V PGTVP+CHF+ WVPN Sbjct: 120 CYSPTAIAEHKHCVSSLKSMIDQVISHFGSTKIKAISSNF---APYQDQYVVEDVKKVG-DNAVMCHRLNFEKVVFNCHQVRETTAYVVSLVASDGTKTKALTVCHHDTRGMNPE-LLYEALEVTPGTVPVCHFIGNKAAAWVPN 259
BLAST of CX300085 vs. ExPASy Swiss-Prot
Match: EA30_VICFA (Embryonic abundant protein VF30.1 OS=Vicia faba PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.803e-25 Identity = 61/145 (42.07%), Postives = 84/145 (57.93%), Query Frame = 1 Query: 28 CEDPGIKGEQKYCATSLESMIDFSTSKLGKS-VQAISTEVKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPN 459 C P E K+C +SL+SMID S G + ++AIS+ Q + VK++ D +V+CH+ N+ VF CH + T AY+V L +DGTK KA VCH DT NP+ L ++ L+V PGTVP+CHF+ WVPN Sbjct: 120 CYSPTAIAEHKHCVSSLKSMIDQVISHFGSTKIKAISSNF---APYQDQYVVEDVKKVG-DNAVMCHRLNFEKVVFNCHQVRDTTAYVVSLVASDGTKTKALTVCHHDTRGMNPE-LLYEALEVTPGTVPVCHFIGNKAAAWVPN 259 The following BLAST results are available for this feature:
BLAST of CX300085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300085 ID=CX300085; Name=CX300085; organism=Citrus clementina; type=EST; length=506bpback to top |