CX300194
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_BACFN (Biosynthetic arginine decarboxylase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=speA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.274e-17 Identity = 50/141 (35.46%), Postives = 72/141 (51.06%), Query Frame = 3 Query: 3 ADQLKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEIG--------ASDPVR--------TYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGGTSLPLHEMVGGGCGERGPYYLGMF 377 A Q+++ ++ F G + ++ A ++ L + +EI A D R Y N S+F S+PD WAI Q+FPI+PI LDE+P L D+TCDSDGKI FI T H M ++ PYY+ +F Sbjct: 396 AQQIREEALDLFSHGIVDLKTRAQIERLYWSITREINQIAGGLKHAPDEFRGLSKLLADKYFCNFSLFQSLPDSWAIDQIFPIMPIQRLDEKPDRSATLQDITCDSDGKIANFI--STRNVAHYMPVHSLKQKEPYYVAVF 534
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_PROM5 (Biosynthetic arginine decarboxylase OS=Prochlorococcus marinus (strain MIT 9515) GN=speA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.582e-16 Identity = 53/144 (36.81%), Postives = 73/144 (50.69%), Query Frame = 3 Query: 3 ADQLKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEIGA----------------SDPVRTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGG---TSLPLHEMVGGGCGERGPYYLGMF 377 A + K+ C+ F+ G + + + A + L AKEI + TY+ NLS+F SIPD WAI Q+FPI+PIH E P +G +DLTCDSDGK++ FI G + L LH E Y +G+F Sbjct: 412 AKKFKKDCLVAFRLGFISLGERAYAEELTWACAKEISSHLDNEKIIHPDLSEITETLSSTYYANLSVFKSIPDTWAINQIFPIIPIHRHLEEPICKGNFADLTCDSDGKLNNFIDNGKIKSLLNLHRP-----EENNDYLIGIF 550
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_PELPD (Biosynthetic arginine decarboxylase OS=Pelobacter propionicus (strain DSM 2379) GN=speA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.066e-16 Identity = 55/142 (38.73%), Postives = 73/142 (51.41%), Query Frame = 3 Query: 9 QLKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEIG----ASDPV------------RTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIG--GGTS-LPLHEMVGGGCGERGPYYLGMF 377 QL Q + F G L + A + L + K+I PV +TY N S+F SIPD WAI QLFPI+PI L E+P V ++D+TCDSDG+I F+G G T LPLH++ + YY+G F Sbjct: 401 QLIQEAVSLFNLGYLNLNDRAMAEWLYTRIIKKINNLVEKMKPVPEELQNFKLSMRQTYFANFSLFQSIPDSWAIDQLFPIMPIQRLGEKPDVIASIADITCDSDGEITSFVGENGRTKYLPLHKI-----RKNEEYYIGFF 537
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_GEOSF (Biosynthetic arginine decarboxylase OS=Geobacter sp. (strain FRC-32) GN=speA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.066e-16 Identity = 54/142 (38.03%), Postives = 76/142 (53.52%), Query Frame = 3 Query: 9 QLKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEIGAS----DPV------------RTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIG--GGTS-LPLHEMVGGGCGERGPYYLGMF 377 QL Q + F G L + + A + L + K+I + P+ +TY N S+F SIPD WAI QLFPIVPI L+++P V ++D+TCDSDG+I F+G G T LPLH++ + YY+G F Sbjct: 401 QLIQEAVSLFNLGYLTLNERAMAEWLYGKIIKKINSIVEKIKPIPEELQNFQLALRQTYFANFSLFQSIPDSWAIDQLFPIVPIQRLNQKPDVIASIADITCDSDGEITSFVGENGRTKFLPLHKI-----RKDEDYYIGFF 537
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_PSEPK (Biosynthetic arginine decarboxylase OS=Pseudomonas putida (strain KT2440) GN=speA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.698e-16 Identity = 42/84 (50.00%), Postives = 55/84 (65.48%), Query Frame = 3 Query: 135 YHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMF 377 Y N S+F S+PD WAIGQ+ PI+P+H LDE P R VL DLTCDSDGKI++++ TS+P+H + G Y LG+F Sbjct: 465 YICNFSVFQSLPDTWAIGQVLPIIPLHRLDEEPMRRAVLQDLTCDSDGKINQYVDEQSIETSMPVHAVKEG-----EDYLLGVF 543
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_BACTN (Biosynthetic arginine decarboxylase OS=Bacteroides thetaiotaomicron GN=speA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.698e-16 Identity = 51/144 (35.42%), Postives = 73/144 (50.69%), Query Frame = 3 Query: 3 ADQLKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEIG--------ASDPVR--------TYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMF 377 A Q+++ ++ F G + ++ A ++ L + +EI A D R Y N S+F S+PD WAI Q+FPI+PI LDE+P L D+TCDSDGKI FI LP+H + + PYYL +F Sbjct: 396 AQQIREEALDLFSHGIVDLKTRAQIERLYWSITREINQIAGGLKHAPDEFRGLSKLLADKYFCNFSLFQSLPDSWAIDQIFPIMPIQRLDEKPERSATLQDITCDSDGKIANFISTRNVAHYLPVHSL-----KKTEPYYLAVF 534
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_PSESM (Biosynthetic arginine decarboxylase OS=Pseudomonas syringae pv. tomato GN=speA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.524e-16 Identity = 42/84 (50.00%), Postives = 54/84 (64.29%), Query Frame = 3 Query: 135 YHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMF 377 Y N S+F S+PD WAIGQ+ PI+P+H LDE P R VL DLTCDSDGKI +++ TS+P+H + E Y LG+F Sbjct: 465 YICNFSVFQSLPDTWAIGQVLPILPLHRLDEEPVRRAVLQDLTCDSDGKIKQYVDEQSIETSMPVHSL-----NEGEDYLLGIF 543
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_GEOSL (Biosynthetic arginine decarboxylase OS=Geobacter sulfurreducens GN=speA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.603e-16 Identity = 53/142 (37.32%), Postives = 76/142 (53.52%), Query Frame = 3 Query: 9 QLKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEI-GASDPVR---------------TYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIG--GGTS-LPLHEMVGGGCGERGPYYLGMF 377 QL Q + F G L + + A + L + ++I G + ++ TY N S+F SIPD WAI QLFPIVPI L+++P V ++D+TCDSDG+I F+G G T LPLH+M + Y++G F Sbjct: 401 QLIQEAVSLFNLGYLTLNERAMAEWLHGKILRKINGIVEKIKPIPEELQNFQLSLRQTYFANFSLFQSIPDSWAIDQLFPIVPIQRLNQKPDVMASIADITCDSDGEITSFVGENGRTKYLPLHKM-----RKDEDYFVGFF 537
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_DEIRA (Biosynthetic arginine decarboxylase OS=Deinococcus radiodurans GN=speA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.603e-16 Identity = 44/81 (54.32%), Postives = 55/81 (67.90%), Query Frame = 3 Query: 144 NLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFI---GGGTSLPLHEMVGGGCGERGPYYLGMF 377 N S+F S+PD WAIG LFPIVP+ L+E+P + L D+TCDSDGK++KFI +LPLHE G+R PYYLG F Sbjct: 488 NFSLFQSLPDNWAIGALFPIVPLDRLNEQPTRQATLVDITCDSDGKVEKFIDLRDVKATLPLHEP-----GDR-PYYLGAF 562
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_XANAC (Biosynthetic arginine decarboxylase OS=Xanthomonas axonopodis pv. citri GN=speA PE=3 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 6.011e-16 Identity = 40/87 (45.98%), Postives = 55/87 (63.22%), Query Frame = 3 Query: 126 VRTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMF 377 V Y VN S+F SIPD WAI Q+FPIVPI L+E P RG+++D+TCDSDG + ++ +SLPLH + G G + +G + Sbjct: 450 VDKYFVNFSVFESIPDVWAIDQVFPIVPIERLNEAPQRRGIIADMTCDSDGMVKTYVENESLDSSLPLHRLNAGESYRIGFFLVGAY 536 The following BLAST results are available for this feature:
BLAST of CX300194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300194 ID=CX300194; Name=CX300194; organism=Citrus clementina; type=EST; length=377bpback to top |