CX300194
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPE1_SOLLC (Arginine decarboxylase OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 2.583e-51 Identity = 92/125 (73.60%), Postives = 108/125 (86.40%), Query Frame = 3 Query: 3 ADQLKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEIGASDPVRTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGGTSLPLHEMVGGGCGERGPYYLGMF 377 +DQLKQRC+EQFKDG+L IEQLA VD +CD+V+K IG +DPVRTYHVNLS+FTSIPD+W QLFPIVPIH LDE+P +RG+LSDLTCDSDGK+DKFIGG +SLPLHE+ G G+ G YYLGMF Sbjct: 347 SDQLKQRCVEQFKDGSLDIEQLAAVDSICDWVSKAIGVADPVRTYHVNLSVFTSIPDFWGFSQLFPIVPIHRLDEKPTMRGILSDLTCDSDGKVDKFIGGESSLPLHEI---GSGDGGRYYLGMF 468
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPE1_ARATH (Arginine decarboxylase 1 OS=Arabidopsis thaliana GN=SPE1 PE=2 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 3.374e-51 Identity = 95/124 (76.61%), Postives = 106/124 (85.48%), Query Frame = 3 Query: 6 DQLKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEIGASDPVRTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGGTSLPLHEMVGGGCGERGPYYLGMF 377 DQLKQRC+E FK+G+LGIEQLA VDGLC++V K IGASDPV TYHVNLS+FTSIPD+W I QLFPIVPIH LD+RP RG+LSDLTCDSDGKI+KFIGG +SLPLHEM GC G YYLGMF Sbjct: 438 DQLKQRCVEGFKEGSLGIEQLAGVDGLCEWVIKAIGASDPVLTYHVNLSVFTSIPDFWGIDQLFPIVPIHKLDQRPAARGILSDLTCDSDGKINKFIGGESSLPLHEMDNNGC-SGGRYYLGMF 560
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPE1_PEA (Arginine decarboxylase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 2.418e-49 Identity = 89/124 (71.77%), Postives = 102/124 (82.26%), Query Frame = 3 Query: 6 DQLKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEIGASDPVRTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGGTSLPLHEMVGGGCGERGPYYLGMF 377 +Q K+RC+E+FK GTLGIEQLA VDGLCD + + IG DPV+ YHVNLS+FTS+PD+W I QLFPIVPIH LDE+P RG+LSDLTCDSDGKIDKFIGG +SLPLHEM G G G YYLGMF Sbjct: 466 EQFKKRCVEEFKQGTLGIEQLAAVDGLCDLITETIGVKDPVKKYHVNLSVFTSVPDFWGINQLFPIVPIHRLDEKPTARGILSDLTCDSDGKIDKFIGGESSLPLHEMEGHG----GGYYLGMF 585
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPE2_ARATH (Arginine decarboxylase 2 OS=Arabidopsis thaliana GN=SPE2 PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 7.035e-49 Identity = 91/124 (73.39%), Postives = 105/124 (84.68%), Query Frame = 3 Query: 6 DQLKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEIGASDPVRTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGGTSLPLHEMVGGGCGERGPYYLGMF 377 DQLKQRC+E FK+G L IEQLA+VDGLC++V K IGASDPV TY++NLS+FTSIPD W I QLFPIVPIH LD+RPG RG+LSDLTCDSDGKI+KFIGG +SLPLHE+ G G G Y+LGMF Sbjct: 451 DQLKQRCVEGFKEGVLSIEQLASVDGLCEWVLKAIGASDPVHTYNINLSVFTSIPDLWGIDQLFPIVPIHKLDQRPGARGILSDLTCDSDGKINKFIGGESSLPLHELDKNGSG--GRYFLGMF 572
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPE1_BRAJU (Arginine decarboxylase OS=Brassica juncea GN=ADC1 PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 2.956e-47 Identity = 89/124 (71.77%), Postives = 103/124 (83.06%), Query Frame = 3 Query: 6 DQLKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEIGASDPVRTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGGTSLPLHEMVGGGCGERGPYYLGMF 377 DQLKQRC+E+FK+G+L IEQLA VDGLC++V KEIG SDPV TY+VNLS+F SIPD+W I QLFPIVPIH LD+RP RG+LSDLTCDSDGKI+KFIGG +SLPLHE+ G YYLGMF Sbjct: 444 DQLKQRCVEEFKEGSLSIEQLAGVDGLCEWVTKEIGGSDPVLTYNVNLSVFHSIPDFWGIDQLFPIVPIHRLDQRPVARGILSDLTCDSDGKINKFIGGESSLPLHELDNNG------YYLGMF 561
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPE1_SOYBN (Arginine decarboxylase OS=Glycine max PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 4.719e-45 Identity = 83/124 (66.94%), Postives = 101/124 (81.45%), Query Frame = 3 Query: 6 DQLKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEIGASDPVRTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGGTSLPLHEMVGGGCGERGPYYLGMF 377 +++K+RC+EQFK GT+ +EQLA V+GLC+ V K +GA++ VR YHVNLSIFTS+PD W I Q+FPI+PIH LDE+P VRG+LSDLTCDSDGKIDKFI G +SLPLHEM GG YYLGMF Sbjct: 454 EEMKERCVEQFKQGTVCMEQLAAVEGLCELVRKAVGAAESVRRYHVNLSIFTSVPDAWGIEQVFPIIPIHRLDEKPSVRGILSDLTCDSDGKIDKFINGESSLPLHEMEGG-----RTYYLGMF 572
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPE1_DIACA (Arginine decarboxylase OS=Dianthus caryophyllus GN=ADC PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 4.719e-45 Identity = 85/122 (69.67%), Postives = 100/122 (81.97%), Query Frame = 3 Query: 12 LKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEIGASDPVRTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGGTSLPLHEMVGGGCGERGPYYLGMF 377 LKQRC+E FKDG LG+EQLA VDGLC+ V+K +G +D V TY+VNLS+FTSIPD+W IGQLFPI+PIH LD++P RG+LSDLTCDSDGKIDKFIG +SLPLHE+ GG YYLGMF Sbjct: 465 LKQRCVELFKDGCLGMEQLAAVDGLCELVSKALGVADGVCTYNVNLSVFTSIPDFWGIGQLFPIMPIHRLDQQPKARGILSDLTCDSDGKIDKFIGDESSLPLHELSGG-----EGYYLGMF 581
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPE1_ORYSJ (Arginine decarboxylase OS=Oryza sativa subsp. japonica GN=ADC1 PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 8.049e-45 Identity = 86/125 (68.80%), Postives = 101/125 (80.80%), Query Frame = 3 Query: 3 ADQLKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEIGASDPVRTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGGTSLPLHEMVGGGCGERGPYYLGMF 377 ADQLK+RC +QFKDG LG+E LA VD LC+ VA+ +GA++P RTYH+NLS+FTS+PD WAIGQ+FPI+PI L ERP V GVLSDLTCDSDGK+D FIGG SLPLHE+ G RG YYLGMF Sbjct: 453 ADQLKRRCADQFKDGVLGLEHLAAVDSLCEIVARGMGAAEPPRTYHINLSVFTSLPDMWAIGQMFPIIPIQRLGERPAVDGVLSDLTCDSDGKVDHFIGGRHSLPLHELPVH--GTRG-YYLGMF 574
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPE2_THECC (Arginine decarboxylase (Fragment) OS=Theobroma cacao GN=SPE2 PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 8.330e-42 Identity = 77/97 (79.38%), Postives = 88/97 (90.72%), Query Frame = 3 Query: 3 ADQLKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEIGASDPVRTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKF 293 ADQ KQRC+EQFK+GTLGIEQLA+VDGLC++V K IGASDPV TY++NLS+FTSIPD W I QLFPIVPIH LD+RPG RG+LSDLTCDSDGKI+KF Sbjct: 310 ADQWKQRCVEQFKEGTLGIEQLASVDGLCEWVLKAIGASDPVHTYNINLSVFTSIPDLWGIDQLFPIVPIHKLDQRPGARGILSDLTCDSDGKINKF 406
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_ANASP (Biosynthetic arginine decarboxylase OS=Anabaena sp. (strain PCC 7120) GN=speA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.250e-21 Identity = 61/144 (42.36%), Postives = 79/144 (54.86%), Query Frame = 3 Query: 3 ADQLKQRCIEQFKDGTLGIEQLATVDGLC--------------DFVAKEIGASDPVRT--YHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFI---GGGTSLPLHEMVGGGCGERGPYYLGMF 377 A Q K+ I +F G L + + A + L D+V E+ + + Y++NLS+F S PD WAI QLFPI+PIH LDE P RG+L+DLTCDSDGKID+FI + L LH G PYY+GMF Sbjct: 444 ATQFKEEAISRFNLGILRLRERAKAERLYWACCQKILDIIRQHDYVPDELEDLEKIMASIYYINLSVFQSAPDCWAIDQLFPIMPIHRLDEEPTQRGILADLTCDSDGKIDRFIDLRDVKSVLELHPFQPG-----EPYYMGMF 582 The following BLAST results are available for this feature:
BLAST of CX300194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300194 ID=CX300194; Name=CX300194; organism=Citrus clementina; type=EST; length=377bpback to top |