CX300491

Overview
NameCX300491
Unique NameCX300491
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length537
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX300491 vs. ExPASy Swiss-Prot
Match: CH60_STRAG (60 kDa chaperonin OS=Streptococcus agalactiae GN=groL PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.434e-19
Identity = 53/114 (46.49%), Postives = 71/114 (62.28%), Query Frame = 2 
Query:    2 EGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 343
            EGIV GGG ALV++ + V A+K    + DE  G +IV +AL  P   IA+NA             SE  TG+NA   ++ +M+  G+IDP KVTR ALQNAASVA ++LTT+A+
Sbjct:  407 EGIVSGGGTALVNVIEKVAALK---LNGDEETGRNIVLRALEEPVRQIAYNAGYKGSVIIARLKQSEIGTGFNAANGEWVDMVTTGIIDPVKVTRSALQNAASVASLILTTEAV 517
[Close]
BLAST of CX300491 vs. ExPASy Swiss-Prot
Match: CH60_STRA5 (60 kDa chaperonin OS=Streptococcus agalactiae serotype V GN=groL PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.434e-19
Identity = 53/114 (46.49%), Postives = 71/114 (62.28%), Query Frame = 2 
Query:    2 EGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 343
            EGIV GGG ALV++ + V A+K    + DE  G +IV +AL  P   IA+NA             SE  TG+NA   ++ +M+  G+IDP KVTR ALQNAASVA ++LTT+A+
Sbjct:  407 EGIVSGGGTALVNVIEKVAALK---LNGDEETGRNIVLRALEEPVRQIAYNAGYEGSVIIERLKQSEIGTGFNAANGEWVDMVTTGIIDPVKVTRSALQNAASVASLILTTEAV 517
[Close]
BLAST of CX300491 vs. ExPASy Swiss-Prot
Match: CH60_STRA3 (60 kDa chaperonin OS=Streptococcus agalactiae serotype III GN=groL PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.434e-19
Identity = 53/114 (46.49%), Postives = 71/114 (62.28%), Query Frame = 2 
Query:    2 EGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 343
            EGIV GGG ALV++ + V A+K    + DE  G +IV +AL  P   IA+NA             SE  TG+NA   ++ +M+  G+IDP KVTR ALQNAASVA ++LTT+A+
Sbjct:  407 EGIVSGGGTALVNVIEKVAALK---LNGDEETGRNIVLRALEEPVRQIAYNAGYEGSVIIERLKQSEIGTGFNAANGEWVDMVTTGIIDPVKVTRSALQNAASVASLILTTEAV 517
[Close]
BLAST of CX300491 vs. ExPASy Swiss-Prot
Match: CH60_STRA1 (60 kDa chaperonin OS=Streptococcus agalactiae serotype Ia GN=groL PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.434e-19
Identity = 53/114 (46.49%), Postives = 71/114 (62.28%), Query Frame = 2 
Query:    2 EGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 343
            EGIV GGG ALV++ + V A+K    + DE  G +IV +AL  P   IA+NA             SE  TG+NA   ++ +M+  G+IDP KVTR ALQNAASVA ++LTT+A+
Sbjct:  407 EGIVSGGGTALVNVIEKVAALK---LNGDEETGRNIVLRALEEPVRQIAYNAGYEGSVIIERLKQSEIGTGFNAANGEWVDMVTTGIIDPVKVTRSALQNAASVASLILTTEAV 517
[Close]
BLAST of CX300491 vs. ExPASy Swiss-Prot
Match: CH60_STAES (60 kDa chaperonin OS=Staphylococcus epidermidis (strain ATCC 12228) GN=groL PE=3 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 6.434e-19
Identity = 54/114 (47.37%), Postives = 69/114 (60.53%), Query Frame = 2 
Query:    2 EGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 343
            EGIV GGG ALV++   V  IK    + D   G +IV KAL AP   IA NA             +E   G+NA T+++ NML+ G++DP KVTR ALQ+AASVA M LTT+A+
Sbjct:  407 EGIVAGGGTALVNIYQKVSEIK---AEGDVETGVNIVLKALQAPVRQIAENAGLEGSIIVERLKHAEAGVGFNAATNEWVNMLEEGIVDPTKVTRSALQHAASVAAMFLTTEAV 517
[Close]
BLAST of CX300491 vs. ExPASy Swiss-Prot
Match: CH60_STAEQ (60 kDa chaperonin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=groL PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.434e-19
Identity = 54/114 (47.37%), Postives = 69/114 (60.53%), Query Frame = 2 
Query:    2 EGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 343
            EGIV GGG ALV++   V  IK    + D   G +IV KAL AP   IA NA             +E   G+NA T+++ NML+ G++DP KVTR ALQ+AASVA M LTT+A+
Sbjct:  407 EGIVAGGGTALVNIYQKVSEIK---AEGDVETGVNIVLKALQAPVRQIAENAGLEGSIIVERLKHAEAGVGFNAATNEWVNMLEEGIVDPTKVTRSALQHAASVAAMFLTTEAV 517
[Close]
BLAST of CX300491 vs. ExPASy Swiss-Prot
Match: CH60_STAEP (60 kDa chaperonin OS=Staphylococcus epidermidis GN=groL PE=3 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 6.434e-19
Identity = 54/114 (47.37%), Postives = 69/114 (60.53%), Query Frame = 2 
Query:    2 EGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 343
            EGIV GGG ALV++   V  IK    + D   G +IV KAL AP   IA NA             +E   G+NA T+++ NML+ G++DP KVTR ALQ+AASVA M LTT+A+
Sbjct:  407 EGIVAGGGTALVNIYQKVSEIK---AEGDVETGVNIVLKALQAPVRQIAENAGLEGSIIVERLKHAEAGVGFNAATNEWVNMLEEGIVDPTKVTRSALQHAASVAAMFLTTEAV 517
[Close]
BLAST of CX300491 vs. ExPASy Swiss-Prot
Match: CH60_STAAW (60 kDa chaperonin OS=Staphylococcus aureus (strain MW2) GN=groL PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.434e-19
Identity = 54/114 (47.37%), Postives = 70/114 (61.40%), Query Frame = 2 
Query:    2 EGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 343
            EGIV GGG ALV++   V  I+    + D   G +IV KAL AP   IA NA             +E   G+NA T+++ NML+AG++DP KVTR ALQ+AASVA M LTT+A+
Sbjct:  407 EGIVAGGGTALVNVYQKVSEIE---AEGDIETGVNIVLKALTAPVRQIAENAGLEGSVIVERLKNAEPGVGFNAATNEWVNMLEAGIVDPTKVTRSALQHAASVAAMFLTTEAV 517
[Close]
BLAST of CX300491 vs. ExPASy Swiss-Prot
Match: CH60_STAAS (60 kDa chaperonin OS=Staphylococcus aureus (strain MSSA476) GN=groL PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.434e-19
Identity = 54/114 (47.37%), Postives = 70/114 (61.40%), Query Frame = 2 
Query:    2 EGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 343
            EGIV GGG ALV++   V  I+    + D   G +IV KAL AP   IA NA             +E   G+NA T+++ NML+AG++DP KVTR ALQ+AASVA M LTT+A+
Sbjct:  407 EGIVAGGGTALVNVYQKVSEIE---AEGDIETGVNIVLKALTAPVRQIAENAGLEGSVIVERLKNAEPGVGFNAATNEWVNMLEAGIVDPTKVTRSALQHAASVAAMFLTTEAV 517
[Close]
BLAST of CX300491 vs. ExPASy Swiss-Prot
Match: CH60_STAAN (60 kDa chaperonin OS=Staphylococcus aureus (strain N315) GN=groL PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.434e-19
Identity = 54/114 (47.37%), Postives = 70/114 (61.40%), Query Frame = 2 
Query:    2 EGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 343
            EGIV GGG ALV++   V  I+    + D   G +IV KAL AP   IA NA             +E   G+NA T+++ NML+AG++DP KVTR ALQ+AASVA M LTT+A+
Sbjct:  407 EGIVAGGGTALVNVYQKVSEIE---AEGDIETGVNIVLKALTAPVRQIAENAGLEGSVIVERLKNAEPGVGFNAATNEWVNMLEAGIVDPTKVTRSALQHAASVAAMFLTTEAV 517
The following BLAST results are available for this feature:
BLAST of CX300491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_STRAG6.434e-1946.4960 kDa chaperonin OS=Streptococcus agalactiae GN=g... [more]
CH60_STRA56.434e-1946.4960 kDa chaperonin OS=Streptococcus agalactiae sero... [more]
CH60_STRA36.434e-1946.4960 kDa chaperonin OS=Streptococcus agalactiae sero... [more]
CH60_STRA16.434e-1946.4960 kDa chaperonin OS=Streptococcus agalactiae sero... [more]
CH60_STAES6.434e-1947.3760 kDa chaperonin OS=Staphylococcus epidermidis (s... [more]
CH60_STAEQ6.434e-1947.3760 kDa chaperonin OS=Staphylococcus epidermidis (s... [more]
CH60_STAEP6.434e-1947.3760 kDa chaperonin OS=Staphylococcus epidermidis GN... [more]
CH60_STAAW6.434e-1947.3760 kDa chaperonin OS=Staphylococcus aureus (strain... [more]
CH60_STAAS6.434e-1947.3760 kDa chaperonin OS=Staphylococcus aureus (strain... [more]
CH60_STAAN6.434e-1947.3760 kDa chaperonin OS=Staphylococcus aureus (strain... [more]

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Properties
Property NameValue
Genbank descriptionC07010G10SK SaltLeaf1 Citrus clementina cDNA clone C07010G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300491 ID=CX300491; Name=CX300491; organism=Citrus clementina; type=EST; length=537bp
GGAAGGTATTGTTCCTGGTGGTGGTGCTGCTCTGGTTCATCTGTCTGATC
ATGTTCCTGCTATCAAGGACAAGCTTGAAGATGCAGATGAGCGATTAGGT
GCTGACATTGTGCAGAAGGCACTGGTAGCACCTGCATCACTGATAGCTCA
CAATGCTGGAGTTGAAGGTGAGGTTGTTGTGGAGAAGGTGAAAGCTAGTG
AATGGACGACTGGTTACAATGCAATGACAGACAAGTATGAGAACATGCTT
CAGGCTGGAGTTATTGATCCTGCAAAGGTGACAAGATGTGCATTGCAGAA
TGCGGCTTCAGTTGCAGGAATGGTCCTGACCACTCAGGCTATTGTCGTGG
AGAAGCCAAAGCCCAAAACTCCGGTAGCCGCTCCGCCACAAGGTCTTATG
GTGTAATCTCTAGGACTCTCCAGATTTAGTTAGGAGGTTTATAGATGAAA
GAGTGGTTTTATTGCGGTGAACTGAAAAGACAAGTTTTACTTAATTGATA
TAAAATCGTGTCTTTTTTGTAAAAAAAAAAAAAAAAA
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