CX300491
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300491 vs. ExPASy Swiss-Prot
Match: CH602_SYNAS (60 kDa chaperonin 2 OS=Syntrophus aciditrophicus (strain SB) GN=groL2 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 5.820e-20 Identity = 54/114 (47.37%), Postives = 71/114 (62.28%), Query Frame = 2 Query: 2 EGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 343 EGIVPGGG A + + A+K + DE++G +IV+KAL P +IA NA G+NA T+ YE+M++AGVIDP KVTR ALQNAASVA ++LTTQ + Sbjct: 409 EGIVPGGGVAYIRTLPILEALK---LEGDEQVGVNIVRKALEEPLKMIAANAGMEGTIVVEKVKEQSGAFGFNARTEVYEDMIEAGVIDPTKVTRFALQNAASVASLMLTTQCM 519
BLAST of CX300491 vs. ExPASy Swiss-Prot
Match: CH601_SYNS9 (60 kDa chaperonin 1 OS=Synechococcus sp. (strain CC9902) GN=groL1 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 5.820e-20 Identity = 54/114 (47.37%), Postives = 66/114 (57.89%), Query Frame = 2 Query: 2 EGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 343 EGIVPGGG L HL+ + + +E +GA+IV AL AP IA NA + GYNA Y +ML AG++DPAKVTR LQNAAS+AGMVLTT+ I Sbjct: 407 EGIVPGGGTTLAHLAPALEEWANGNLSGEELIGANIVAAALTAPLMRIAENAGANGAVVAENVKSRSNNEGYNAANGDYVDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520
BLAST of CX300491 vs. ExPASy Swiss-Prot
Match: RUBB_PEA (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Pisum sativum PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 7.601e-20 Identity = 53/115 (46.09%), Postives = 72/115 (62.61%), Query Frame = 2 Query: 2 EGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 343 EGIV GGG L+ L+ V AIKD L + +E++GADIV++AL P LIA NA +S+ GYNA T KYE+++ AG+IDP KV RC L++A+SVA L + + Sbjct: 457 EGIVVGGGCTLLRLASKVDAIKDTLANDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNPKYGYNAATGKYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCV 571
BLAST of CX300491 vs. ExPASy Swiss-Prot
Match: CH60_THENE (60 kDa chaperonin OS=Thermotoga neapolitana GN=groL PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.601e-20 Identity = 55/115 (47.83%), Postives = 73/115 (63.48%), Query Frame = 2 Query: 2 EGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 343 EGIVPGGG L+ V + ++L D DE++GA IV KAL AP IA NA AS+ G++A+ ++ NM + G+IDPAKVTR ALQNAAS+AGM+LTT+ + Sbjct: 407 EGIVPGGGVTLLRSRKAVEKLLEEL-DGDEKIGAQIVYKALSAPIRQIAENAGYDGAVIIEKILASDDPAYGFDALRGEFGNMFEKGIIDPAKVTRSALQNAASIAGMLLTTEVL 520
BLAST of CX300491 vs. ExPASy Swiss-Prot
Match: CH60_ODOSI (60 kDa chaperonin, chloroplastic OS=Odontella sinensis GN=groL PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.601e-20 Identity = 51/114 (44.74%), Postives = 67/114 (58.77%), Query Frame = 2 Query: 2 EGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 343 EGIVPGGGA L HL++++ DE +GA I+ +A+VAP IA NA E+ GYNA + + NM G++DPAKVTR LQNA S+A M+LTT+ I Sbjct: 409 EGIVPGGGATLAHLAENLLTWAKINLKEDELIGAMIISRAIVAPLKRIAENAGINGPVIIEKVQQQEFEIGYNAAKNVFGNMYDEGIVDPAKVTRSGLQNATSIASMILTTECI 522
BLAST of CX300491 vs. ExPASy Swiss-Prot
Match: CH60_MACCJ (60 kDa chaperonin OS=Macrococcus caseolyticus (strain JCSC5402) GN=groL PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.601e-20 Identity = 56/114 (49.12%), Postives = 68/114 (59.65%), Query Frame = 2 Query: 2 EGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 343 EGIV GGG ALV + + V A++ D G IV KAL AP IA NA +E GYNA TD++ NM+ AG++DP KVTR ALQNAASVA M LTT+A+ Sbjct: 407 EGIVAGGGTALVSIYNKVAAVE---ATGDVATGVKIVLKALEAPIRQIAENAGLEGSVIVEKIKHAETGVGYNAATDEWVNMIDAGIVDPTKVTRSALQNAASVAAMFLTTEAV 517
BLAST of CX300491 vs. ExPASy Swiss-Prot
Match: CH60_LACLA (60 kDa chaperonin OS=Lactococcus lactis subsp. lactis GN=groL PE=3 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 7.601e-20 Identity = 53/114 (46.49%), Postives = 73/114 (64.04%), Query Frame = 2 Query: 2 EGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 343 EGIV GGG ALV+ + A+ E+ D + G +IV++AL P IA NA + E TG+NA T ++ NM++ G++DPAKVTR ALQNAASVAG++LTT+A+ Sbjct: 407 EGIVSGGGTALVNA---IAALDKLSEEGDIQTGINIVRRALEEPVRQIAANAGYEGSVIIDKLRSEEVGTGFNAATGQWVNMIEEGIVDPAKVTRSALQNAASVAGLILTTEAV 517
BLAST of CX300491 vs. ExPASy Swiss-Prot
Match: CH602_MYCPA (60 kDa chaperonin 2 OS=Mycobacterium paratuberculosis GN=groL2 PE=3 SV=4) HSP 1 Score: 96.6709 bits (239), Expect = 7.601e-20 Identity = 54/114 (47.37%), Postives = 71/114 (62.28%), Query Frame = 2 Query: 2 EGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 343 EGIV GGG AL+H +PA+ + + +E GA+IV+ AL AP IA N S TG NA T +YE++L+AG+ DP KVTR ALQNAAS+AG+ LTT+A+ Sbjct: 407 EGIVAGGGVALLHA---IPALDELKLEGEEATGANIVRVALEAPLKQIAFNGGLEPGVVAEKVRNSPAGTGLNAATGEYEDLLKAGIADPVKVTRSALQNAASIAGLFLTTEAV 517
BLAST of CX300491 vs. ExPASy Swiss-Prot
Match: CH60_BACV8 (60 kDa chaperonin OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=groL PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 9.927e-20 Identity = 51/114 (44.74%), Postives = 69/114 (60.53%), Query Frame = 2 Query: 2 EGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 343 EGIVPGGG A + S+ + +K ++ DE G +I+++A+ P I NA + GYNA TD YEN+ AGV+DPAKVTR AL+NAAS+AGM LTT+ + Sbjct: 409 EGIVPGGGVAYIRASEALEGLKG--DNEDETTGIEIIKRAIEEPLRQIVANAGKEGAVVVQKVREGKGDFGYNARTDVYENLHAAGVVDPAKVTRVALENAASIAGMFLTTECV 520
BLAST of CX300491 vs. ExPASy Swiss-Prot
Match: CH60_LACGA (60 kDa chaperonin OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=groL PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.296e-19 Identity = 54/114 (47.37%), Postives = 69/114 (60.53%), Query Frame = 2 Query: 2 EGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 343 EG V GGG ALV + + K + D + G +IV KAL AP IA NA + GYNA TDK+ENM++AG+IDP KVTR ALQNAAS+A ++LTT+A+ Sbjct: 407 EGYVAGGGTALVDVMKSIQG-NVKGDSQDAQTGVNIVMKALGAPVRQIAENAGKDGAVILDHLEHEDPEIGYNAATDKWENMVKAGIIDPTKVTRSALQNAASIAALLLTTEAV 519 The following BLAST results are available for this feature:
BLAST of CX300491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300491 ID=CX300491; Name=CX300491; organism=Citrus clementina; type=EST; length=537bpback to top |