CX300493
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300493 vs. ExPASy Swiss-Prot
Match: BAS1_ORYSJ (2-Cys peroxiredoxin BAS1, chloroplastic OS=Oryza sativa subsp. japonica GN=BAS1 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.504e-24 Identity = 51/54 (94.44%), Postives = 53/54 (98.15%), Query Frame = 1 Query: 1 NLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAAI 162 NLAIGRSVDET+RTLQALQYVQ+NPDEVCPAGWKPGDKSMKPDPK SKEYFAAI Sbjct: 208 NLAIGRSVDETMRTLQALQYVQDNPDEVCPAGWKPGDKSMKPDPKGSKEYFAAI 261
BLAST of CX300493 vs. ExPASy Swiss-Prot
Match: BAS1B_ARATH (2-Cys peroxiredoxin BAS1-like, chloroplastic OS=Arabidopsis thaliana GN=At5g06290 PE=2 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 4.504e-24 Identity = 50/54 (92.59%), Postives = 53/54 (98.15%), Query Frame = 1 Query: 1 NLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAAI 162 NL IGRSVDET+RTLQALQYVQENPDEVCPAGWKPG+KSMKPDPKLSKEYF+AI Sbjct: 218 NLGIGRSVDETMRTLQALQYVQENPDEVCPAGWKPGEKSMKPDPKLSKEYFSAI 271
BLAST of CX300493 vs. ExPASy Swiss-Prot
Match: BAS1A_ARATH (2-Cys peroxiredoxin BAS1, chloroplastic OS=Arabidopsis thaliana GN=BAS1 PE=1 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 5.882e-24 Identity = 49/54 (90.74%), Postives = 53/54 (98.15%), Query Frame = 1 Query: 1 NLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAAI 162 NL IGRSVDET+RTLQALQY+QENPDEVCPAGWKPG+KSMKPDPKLSKEYF+AI Sbjct: 213 NLGIGRSVDETMRTLQALQYIQENPDEVCPAGWKPGEKSMKPDPKLSKEYFSAI 266
BLAST of CX300493 vs. ExPASy Swiss-Prot
Match: BAS1_SPIOL (2-Cys peroxiredoxin BAS1, chloroplastic OS=Spinacia oleracea GN=BAS1 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 7.950e-21 Identity = 47/54 (87.04%), Postives = 50/54 (92.59%), Query Frame = 1 Query: 1 NLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAAI 162 NL IGRSVDET+RTLQALQY NPDEVCPAGWKPG+KSMKPDPKLSKEYF+AI Sbjct: 213 NLGIGRSVDETMRTLQALQYTG-NPDEVCPAGWKPGEKSMKPDPKLSKEYFSAI 265
BLAST of CX300493 vs. ExPASy Swiss-Prot
Match: BAS1_HORVU (2-Cys peroxiredoxin BAS1, chloroplastic (Fragment) OS=Hordeum vulgare GN=BAS1 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.038e-20 Identity = 48/54 (88.89%), Postives = 51/54 (94.44%), Query Frame = 1 Query: 1 NLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAAI 162 NL IGRSVDETLRTLQALQYV++ PDEVCPAGWKPG+KSMKPDPK SKEYFAAI Sbjct: 158 NLGIGRSVDETLRTLQALQYVKK-PDEVCPAGWKPGEKSMKPDPKGSKEYFAAI 210
BLAST of CX300493 vs. ExPASy Swiss-Prot
Match: BAS1_WHEAT (2-Cys peroxiredoxin BAS1, chloroplastic (Fragment) OS=Triticum aestivum GN=TSA PE=1 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 3.021e-20 Identity = 47/54 (87.04%), Postives = 51/54 (94.44%), Query Frame = 1 Query: 1 NLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAAI 162 NL IGRSVDETLRTL+ALQYV++ PDEVCPAGWKPG+KSMKPDPK SKEYFAAI Sbjct: 158 NLGIGRSVDETLRTLRALQYVKK-PDEVCPAGWKPGEKSMKPDPKGSKEYFAAI 210
BLAST of CX300493 vs. ExPASy Swiss-Prot
Match: YCF42_PORYE (Putative peroxiredoxin ycf42 OS=Porphyra yezoensis GN=ycf42 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.227e-18 Identity = 40/53 (75.47%), Postives = 44/53 (83.02%), Query Frame = 1 Query: 1 NLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAA 159 NL GRSV+ETLR LQA+QYVQ +PDEVCPA WKPGDK+M PDP SK YFAA Sbjct: 146 NLEFGRSVEETLRVLQAIQYVQSHPDEVCPANWKPGDKTMNPDPIKSKNYFAA 198
BLAST of CX300493 vs. ExPASy Swiss-Prot
Match: YCF42_PORPU (Putative peroxiredoxin ycf42 OS=Porphyra purpurea GN=ycf42 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.394e-17 Identity = 39/53 (73.58%), Postives = 44/53 (83.02%), Query Frame = 1 Query: 1 NLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAA 159 NL GRSV+ETLR LQA+QYVQ +PDEVCPA WKPGD++M PDP SK YFAA Sbjct: 146 NLEFGRSVEETLRVLQAIQYVQAHPDEVCPANWKPGDRTMNPDPIKSKNYFAA 198
BLAST of CX300493 vs. ExPASy Swiss-Prot
Match: Y755_SYNY3 (Putative peroxiredoxin sll0755 OS=Synechocystis sp. (strain PCC 6803) GN=sll0755 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.606e-13 Identity = 32/56 (57.14%), Postives = 44/56 (78.57%), Query Frame = 1 Query: 1 NLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAAI*E 168 NL+ GRSVDETLR L+A+++VQ +P+EVCP W+ GDK+M PDP+ +K YF + E Sbjct: 144 NLSFGRSVDETLRVLKAIRHVQSHPNEVCPVDWQEGDKTMIPDPEKAKTYFETVAE 199
BLAST of CX300493 vs. ExPASy Swiss-Prot
Match: PRDX1_MYOLU (Peroxiredoxin-1 OS=Myotis lucifugus GN=PRDX1 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.503e-11 Identity = 31/52 (59.62%), Postives = 41/52 (78.85%), Query Frame = 1 Query: 1 NLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFA 156 +L +GRSVDETLR +QA Q+ ++ EVCPAGWKPG ++KPD + SKEYF+ Sbjct: 146 DLPVGRSVDETLRLVQAFQFTDKH-GEVCPAGWKPGSDTIKPDVQKSKEYFS 196 The following BLAST results are available for this feature:
BLAST of CX300493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300493 ID=CX300493; Name=CX300493; organism=Citrus clementina; type=EST; length=391bpback to top |