CX300573

Overview
NameCX300573
Unique NameCX300573
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length729
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: BAIA1_EUBSP (Bile acid 7-dehydroxylase 1/3 OS=Eubacterium sp. (strain VPI 12708) GN=baiA1 PE=1 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 1.688e-17
Identity = 68/221 (30.77%), Postives = 104/221 (47.06%), Query Frame = 3
Query:   51 LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN--KGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSL 707
            ++TGGTRGIG A  +     GA V      Q E+D  L + K      +V G   DL+SR+     + TV   + G+L+++INNA I        ++ ED   +   N   VF+ +  A+   K +  G I+  +SV G+ G  S   Y   K  +  LT  L  E  + NIR   VAP V+ T M K         E L+   +  P+ R  +P+E++++
Sbjct:   10 IITGGTRGIGFAAAKLFIENGAKVSIFGETQEEVDTALAQLKELYPEEEVLGFAPDLTSRDAVMAAVGTVAQKY-GRLDVMINNAGITMNSVFSRVSEEDFKNIMDINVNGVFNGAWSAYQCMKDAKQGVIINTASVTGIYGSLSGIGYPTSKAGVIGLTHGLGREIIRKNIRVVGVAPGVVDTDMTKGLP-----PEILEDYLKTLPMKRMLKPEEIANV 224          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: FABG_CUPLA (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Cuphea lanceolata GN=CLKR27 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.879e-17
Identity = 69/233 (29.61%), Postives = 105/233 (45.06%), Query Frame = 3
Query:   30 SLNGMTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGILCL 725
            S+     +VTG +RGIG A    L + G  ++   +R+  E +    E +  G +      D+S  E  E +I+T    + G ++IL+NNA I      + +       V   N   VF  +Q A  +      G I+ I+SV G+ G    + Y A K  +   TK +A E+A  NI  N VAP  I + M         G +    I    P+GR G+P+EV+ LV  L +
Sbjct:   74 SVESPVVIVTGASRGIGKAIALSLGKAGCKVLVNYARSSKEAEEVSKEIEAFGGQALTFGGDVSKEEDVEAMIKTAVDAW-GTVDILVNNAGITRDGLLMRMKKSQWQEVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNAGQANYSAAKAGVIGFTKTVAREYASRNINVNAVAPGFISSDMTSKL-----GDDINKKILETIPLGRYGQPEEVAGLVEFLAI 300          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: PHBB_CHRVI (Acetoacetyl-CoA reductase OS=Chromatium vinosum GN=phbB PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.761e-17
Identity = 68/229 (29.69%), Postives = 108/229 (47.16%), Query Frame = 3
Query:   48 ALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKN----KGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            ALVTGG  GIG +    LA+ G  +V  C  ++    A   EWK     +GF +     D+SS +   +++  +T    G ++IL+N A I   K    +       V + N  SVF++++         G G I+ ISSV G RG    + Y A K  M+  T  LA E A   +  NT++P  ++T+M     +    S  + GI    P+ R  +P+E+++ +  L
Sbjct:    5 ALVTGGIGGIGTSICTRLAKDGCTVVANCHPSEA---AAAEEWKQARAAEGFDIAVFTADVSSFDDSARMVREITEQV-GPIDILVNCAGITRDKTFKKMEQAHWEAVINVNLNSVFNVTRQVWDGMLERGFGRIINISSVNGQRGQFGQANYSAAKAGMHGFTMALAQEGASKGVTVNTISPGYVETAMTLAMNDDVRNS-IISGI----PMRRMAQPNEIAAAIAFL 224          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: NODG_RHIS3 (Nodulation protein G OS=Rhizobium sp. (strain N33) GN=nodG PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.912e-17
Identity = 77/232 (33.19%), Postives = 113/232 (48.71%), Query Frame = 3
Query:   27 WSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS-QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            + L G  ALVTG + GIG A    L   GAIV        +L+    E    G +V     +LS+R++ + L +   +  +G ++IL+NNA I      V ++  D  TV   N  +VF L+ +L HP+ +   +G I+ I+SV GV G P  + Y A K  M   +K+LA E A  NI  N VAP  I+++M     +  +     + I    P  R G   EV+S V  L
Sbjct:    2 FELTGRKALVTGASGGIGEAIARVLHAQGAIVGLHGTRVEKLETLAAE---LGDRVKLFPANLSNRDEVKALGQKAEADLEG-VDILVNNAGITKDGLFVRMSDADWDTVLEVNLTAVFRLTRELTHPMMRRR-HGRIINITSVVGVTGNPGQTNYCASKAGMIGFSKSLAQEIATRNITVNCVAPGFIESAMTDKLNDKQK-----EAIMAAIPTRRMGTSVEVASAVAYL 223          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: FABG_RICPR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia prowazekii GN=fabG PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 4.912e-17
Identity = 68/229 (29.69%), Postives = 110/229 (48.03%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            L G T+L+TG + GIG A    L + G+ V     N+ +L +  +  K+     T  VC+L+++E+   LI   ++     L+IL+ NA I      + +  +D   V   N ++ F L++ A         G I+ ISS+ G+ G P  + Y A K  +  +TK+L+ E A   I  N VAP  IK+ M     E        + I ++ P+G  G P++V+  V  L
Sbjct:    4 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDN---YTIEVCNLANKEECSNLISKTSN-----LDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQR-----EAIVQKIPLGTYGIPEDVAYAVAFL 219          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: CBR4_XENLA (Carbonyl reductase family member 4 OS=Xenopus laevis GN=cbr4 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.912e-17
Identity = 71/219 (32.42%), Postives = 107/219 (48.86%), Query Frame = 3
Query:   54 VTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLV 710
            V GG+RGIG A  + LA+    V   SRN     A + E    G  +  S CD+S   + +   + + +   G ++ L+N+A I+     +   +ED+ ++ S N        ++A         GSIV I S+ G +G    S+YGA K  +   +K+LA E AK NIR N VAP  I+T M    +E        D + +  P+GR GEP+EV+  V
Sbjct:    7 VFGGSRGIGKAVAKLLAQKDYKVAVISRNLEVAQAAVTEI---GAHLALS-CDVSKENEIQCTFKEIKNNL-GNIDYLVNSAGISRDALLLRTRSEDIMSLLSINLVGTIQTCKVALKGMIQQQGGSIVNIGSIVGHKGNIGQSIYGASKEGLIGFSKSLAKEVAKRNIRVNVVAPGFIRTDMTSDLKE--------DSLNKMIPLGRFGEPEEVAQSV 212          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: YXBG_BACSU (Uncharacterized oxidoreductase yxbG OS=Bacillus subtilis GN=yxbG PE=3 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 8.378e-17
Identity = 65/229 (28.38%), Postives = 109/229 (47.60%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDM-STVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF---EEGPEGSEFLDGIARQTPIGRAGEPDEVSSL 707
            L   TA++TG   GIG AT E  A  GA V     N+ +++  +   +  G +      D+S     +   + +     G ++IL NNA +      V     D+   + + +    F  S+   PL   +G GSI+  SS+ G       S Y A KG +  LTK +A ++A++ IR N+++P  I+T +I      +E   G +F +     TP+GR G+P E++++
Sbjct:    4 LENKTAVITGAATGIGQATAEVFANEGARVIIGDINKDQMEETVDAIRKNGGQAESFHLDVSDENSVKAFADQIKDAC-GTIDILFNNAGVDQEGGKVHEYPVDLFDRIIAVDLRGTFLCSKYLIPLMLENG-GSIINTSSMSGRAADLDRSGYNAAKGGITNLTKAMAIDYARNGIRVNSISPGTIETPLIDKLAGTKEQEMGEQFREANKWITPLGRLGQPKEMATV 230          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: KDUD_ECOLI (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=Escherichia coli (strain K12) GN=kduD PE=3 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 8.378e-17
Identity = 69/226 (30.53%), Postives = 109/226 (48.23%), Query Frame = 3
Query:   27 WSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGS-EFLDGIARQTPIGRAGEPDEV 698
            +SL G  A+VTG   G+G      LA+ G  +     N +E    + +    G +      DL   +    L++   + F G ++IL+NNA +   +  ++ + +D   V + N +SVF +SQ A   F A GN G I+ I+S+   +G   V  Y A K  +  +T+ +A EWAK NI  N +AP  + T+  +      + S E LD I    P GR G P ++
Sbjct:    6 FSLEGKVAVVTGCDTGLGQGMALGLAQAGCDI--VGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLDRAVAEF-GHIDILVNNAGLIRREDALEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRI----PAGRWGLPSDL 224          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: FABG_CHLPN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia pneumoniae GN=fabG PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.378e-17
Identity = 71/234 (30.34%), Postives = 116/234 (49.57%), Query Frame = 3
Query:   30 SLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL-SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGILCLQ 728
            +L G   +VTGG+RGIG   V+     GA V     N+    A +      G +V+ +  D+S     +  ++        K++IL+NNA I      + ++ +D  +V STN  S+++  S +   + KA  +GSI+ ++S+    G    + Y A K  +   TK+LA E A  NIR N +AP  I+T M     +  + +E+L  I    P+GRAG P++V+ +   L  Q
Sbjct:    4 TLVGKKVIVTGGSRGIGLGIVKLFLENGADVEIWGLNEERGQAVIESLTGLGGEVSFARVDVSHNGGVKDCVQKFLDK-HNKIDILVNNAGITRDNLLMRMSEDDWQSVISTNLTSLYYTCSSVIRHMIKAR-SGSIINVASIVAKIGSAGQTNYAAAKAGIIAFTKSLAKEVAARNIRVNCLAPGFIETDMTSVLNDNLK-AEWLKSI----PLGRAGTPEDVARVALFLASQ 230          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: RHLG_PSEAE (Rhamnolipids biosynthesis 3-oxoacyl-[acyl-carrier-protein] reductase OS=Pseudomonas aeruginosa GN=rhlG PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.094e-16
Identity = 68/235 (28.94%), Postives = 108/235 (45.96%), Query Frame = 3
Query:   27 WSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ---IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGS----IVFISSVGGVRGI-PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSL 707
            +SL G  ALVTGG+RGIG    + L   GA V  C+R+     +   RL  + +          DLSS     +L + +  +   +L+IL+NNA  ++              V   N  SVF   Q   PL + S +      ++ I SV G+  +      YG  K A++QL++ LA E   ++I  N +AP    + M +     P+    L+  +   P+GR G P+E+++L
Sbjct:    5 FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGD----CQAIPADLSSEAGARRLAQALGEL-SARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQA---LEADSASIPMGRWGRPEEMAAL 231          
The following BLAST results are available for this feature:
BLAST of CX300573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 263
Match NameE-valueIdentityDescription
BAIA1_EUBSP1.688e-1730.77Bile acid 7-dehydroxylase 1/3 OS=Eubacterium sp. (... [more]
FABG_CUPLA2.879e-1729.613-oxoacyl-[acyl-carrier-protein] reductase, chloro... [more]
PHBB_CHRVI3.761e-1729.69Acetoacetyl-CoA reductase OS=Chromatium vinosum GN... [more]
NODG_RHIS34.912e-1733.19Nodulation protein G OS=Rhizobium sp. (strain N33)... [more]
FABG_RICPR4.912e-1729.693-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
CBR4_XENLA4.912e-1732.42Carbonyl reductase family member 4 OS=Xenopus laev... [more]
YXBG_BACSU8.378e-1728.38Uncharacterized oxidoreductase yxbG OS=Bacillus su... [more]
KDUD_ECOLI8.378e-1730.532-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=E... [more]
FABG_CHLPN8.378e-1730.343-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]
RHLG_PSEAE1.094e-1628.94Rhamnolipids biosynthesis 3-oxoacyl-[acyl-carrier-... [more]

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Properties
Property NameValue
Genbank descriptionC07011G12SK SaltLeaf1 Citrus clementina cDNA clone C07011G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300573 ID=CX300573; Name=CX300573; organism=Citrus clementina; type=EST; length=729bp
AAGAGCTCATTCGTAGAAACAAAAGATGGTCTCTCAATGGAATGACTGCT
TTAGTCACTGGAGGAACCCGAGGCATAGGGCATGCTACTGTAGAAGAATT
AGCAAGATTTGGAGCAATTGTTCACACATGTTCACGTAATCAAATTGAGC
TCGATGCACGTTTACATGAATGGAAAAACAAAGGGTTCAAAGTAACGGGG
TCAGTATGTGACCTGTCATCCCGCGAACAGCGTGAGAAGCTAATAGAGAC
TGTCACCTCCATCTTTCAGGGGAAGCTCAACATTCTTATAAACAATGCTG
CAATAGCTTTCGTAAAACCAACGGTGGATATTACAGCTGAGGACATGTCA
ACTGTAAGCAGCACAAATTTCGAGTCTGTTTTTCATCTGTCTCAACTAGC
ACATCCTCTGTTTAAAGCATCAGGGAATGGAAGTATCGTATTTATTTCCT
CTGTTGGGGGCGTTAGAGGAATACCTTCTGTTTCTCTGTATGGTGCATAC
AAAGGAGCCATGAATCAACTAACGAAGAATTTGGCATGCGAGTGGGCAAA
GGATAACATCCGTACTAATACAGTTGCACCCTGGGTTATTAAAACCTCAA
TGATCAAACCTTTTGAGGAAGGTCCTGAAGGAAGTGAATTTCTGGATGGA
ATAGCACGTCAAACACCCATCGGTCGAGCTGGAGAGCCTGATGAGGTTTC
TTCATTGGTGGGCATTCTTTGCCTTCAGC
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