CX300573
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: TRNH_DATST (Tropinone reductase homolog OS=Datura stramonium PE=2 SV=1) HSP 1 Score: 281.952 bits (720), Expect = 2.318e-75 Identity = 141/236 (59.75%), Postives = 175/236 (74.15%), Query Frame = 3 Query: 18 NKRWSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGILCL 725 ++RWSL GMTALVTGGTRGIG+A VEELA FGA V+TCSR+Q +LD L +W+ KGFKV+G VCD+SS QR+ L+E+VTS F GKLNILINNA K + TAED S + TNFE+ ++L QLAHPL KASGN SIVF SS GV +P S+Y A KGA+NQ+TK+LACEWAKD+IR N VAPW+I T +I+ + P + ++ + + P+ RAGEP EVSSLV LCL Sbjct: 10 DRRWSLRGMTALVTGGTRGIGYAIVEELANFGAEVYTCSRSQNDLDECLEKWRRKGFKVSGPVCDVSSISQRQTLMESVTSSFNGKLNILINNAGTTIPKEATNFTAEDYSIIMGTNFEASYNLCQLAHPLLKASGNASIVFNSSAAGVIAVPLSSIYAASKGAINQVTKSLACEWAKDSIRVNAVAPWIINTPIIEAACQVPSQKKNIESLIGRAPMKRAGEPSEVSSLVTYLCL 245
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: TRN1_DATST (Tropinone reductase 1 OS=Datura stramonium GN=TR1 PE=1 SV=1) HSP 1 Score: 274.633 bits (701), Expect = 3.700e-73 Identity = 132/234 (56.41%), Postives = 173/234 (73.93%), Query Frame = 3 Query: 24 RWSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK-PFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGILC 722 RWSL G TALVTGG++GIG+A VEELA GA V+TCSRN+ ELD L W+ KG V GSVCDL SR +R+KL++TV +F GKLNIL+NNA + K D T +D + + TNFE+ +HLSQ+A+PL KAS NG+++F+SS+ G +PSVSLY A KGA+NQ+TK+LACEWAKDNIR N+VAP VI T +++ ++ P E +D +TP+GRAG+P EVS+L+ LC Sbjct: 16 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLC 249
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: TRNH1_ARATH (Tropinone reductase homolog At1g07440 OS=Arabidopsis thaliana GN=At1g07440 PE=1 SV=1) HSP 1 Score: 272.707 bits (696), Expect = 1.406e-72 Identity = 138/237 (58.23%), Postives = 170/237 (71.73%), Query Frame = 3 Query: 15 RNKRWSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGILCL 725 +++RWSL T LVTGGT+GIGHA VEE A FGA++HTC+RN+ EL+ L +W+ KGF+VTGSVCD S R +REKL++TV+S+F GKL+ILINN KPT+D TAED S STN ES +HLSQLAHPL KASG G+I+F+SS+ GV S+Y A KGA+NQL +NLACEWA D IR N VAP VI T P E EF + + P+GR GEP+EVSSLV LC+ Sbjct: 6 QSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIAT----PLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCM 238
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: TRN2_HYONI (Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 PE=2 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 1.609e-68 Identity = 130/233 (55.79%), Postives = 165/233 (70.82%), Query Frame = 3 Query: 24 RWSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGILC 722 RW+L G TALVTGG+RGIG+ VEELA GA V+TCSRNQ ELD L +W++KGF V SVCDLSSR +RE+ ++TV++ F GKLNIL+NNA I K D T ED S + S NFE+ +HLS LAHP KAS G++VFISS+ G +P ++YGA KGAM+QLT+ LA EWAKDNIR N V P VI TSM++ + PE E LD + + + R GEP E++++V LC Sbjct: 4 RWNLEGCTALVTGGSRGIGYGIVEELANLGASVYTCSRNQKELDECLTQWRSKGFNVEASVCDLSSRSEREEFMKTVSNHFHGKLNILVNNAGIVIYKEAKDYTMEDYSHIMSINFEAAYHLSVLAHPFLKASERGNVVFISSISGASALPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSMVEMTIQDPEQKENLDKLIDRCALRRMGEPKELAAVVAFLC 236
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: TRN2_DATST (Tropinone reductase 2 OS=Datura stramonium GN=TR2 PE=1 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 1.043e-67 Identity = 129/233 (55.36%), Postives = 165/233 (70.82%), Query Frame = 3 Query: 24 RWSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGILC 722 RW+L G TALVTGG+RGIG+ VEELA GA V+TCSRNQ EL+ L +W++KGFKV SVCDLSSR +R++L+ TV + F GKLNIL+NNA I K D T ED S + S NFE+ +HLS LAHP KAS G++VFISSV G +P ++YGA KGAM+QLT+ LA EWAKDNIR N V P VI TS+++ + PE E L+ + + + R GEP E++++V LC Sbjct: 4 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLC 236
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: DHRS4_BOVIN (Dehydrogenase/reductase SDR family member 4 OS=Bos taurus GN=DHRS4 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.976e-31 Identity = 85/235 (36.17%), Postives = 122/235 (51.91%), Query Frame = 3 Query: 21 KRWSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGILC 722 +R L+ ALVT T GIG A LA+ GA V SR Q +D + K +G VTG+VC + E RE+L+ T + G ++ILI+NAA++ F +D+ E + N ++ L++ P G GSIV +SS+ PS+ Y K A+ LTKNLA E A+ N+R N +AP +I+TS + E P E I I R G+P+E + +V LC Sbjct: 8 RRNPLDNKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDRAVATLKGEGLSVTGTVCHVGKAEDRERLVATAVKL-HGGVDILISNAAVSPFFGSLMDVPEEVWDKILDVNVKATALLTKAVVPEMAKRGGGSIVIVSSIAAYSPFPSLGPYNVSKTALLGLTKNLALELAESNVRVNCLAPGLIRTSFSRVLWEDPARQE---SIKATFQIKRIGKPEECAGIVSFLC 238
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: DHRS4_MOUSE (Dehydrogenase/reductase SDR family member 4 OS=Mus musculus GN=Dhrs4 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.594e-29 Identity = 88/240 (36.67%), Postives = 118/240 (49.17%), Query Frame = 3 Query: 6 LIRRNKRWSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGILC 722 L RRN L+ ALVT T GIG A LA GA V SR Q +D + + +G VTG VC + E REKLI T +G ++IL++NAA+ F +D+T E V S N + + + P + G GS+V + SV G PS+ Y K A+ LTKN A E A NIR N +AP +IKT E +F I I R G+P++ + +V LC Sbjct: 6 LTRRNP---LSNKVALVTASTDGIGFAIARRLAEDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGIVCHVGKAEDREKLITTALKRHRG-IDILVSNAAVNPFFGNLMDVTEEVWDKVLSINVTATAMMIKAVVPEMEKRGGGSVVIVGSVAGFTRFPSLGPYNVSKTALLGLTKNFAAELAPKNIRVNCLAPGLIKTRFSSVLWEEKAREDF---IKEAMQIRRLGKPEDCAGIVSFLC 238
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: DHRS4_RABIT (Dehydrogenase/reductase SDR family member 4 OS=Oryctolagus cuniculus GN=DHRS4 PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.776e-28 Identity = 80/235 (34.04%), Postives = 122/235 (51.91%), Query Frame = 3 Query: 21 KRWSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGILC 722 +R L A+VT T GIG A LA+ GA V SR Q +D + + +G VTG+VC + E RE+L+ T ++ G ++IL++NAA+ F +D+T E + N +++ +++ P + G GS+V ++S+ + Y K A+ LTKNLA E A NIR N +AP +IKTS K E E I ++ I R G+P+E + +V LC Sbjct: 8 RRDPLANKVAIVTASTDGIGLAIARRLAQDGAHVVISSRKQQNVDRAVAALQAEGLSVTGTVCHVGKAEDRERLVATALNL-HGGIDILVSNAAVNPFFGKLMDVTEEVWDKILDINVKAMALMTKAVVPEMEKRGGGSVVIVASIAAFNPFSGLGPYNVSKTALVGLTKNLALELAAQNIRVNCLAPGLIKTSFSKALWEDKAQEE---NIIQKLRIRRLGKPEECAGIVSFLC 238
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: DHRS4_PONAB (Dehydrogenase/reductase SDR family member 4 OS=Pongo abelii GN=DHRS4 PE=2 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 6.184e-28 Identity = 82/235 (34.89%), Postives = 118/235 (50.21%), Query Frame = 3 Query: 21 KRWSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGILC 722 +R L ALVT T GIG A LA+ GA V SR Q +D + + +G VTG+VC + E RE+L+ T + G ++IL++NAA+ F +D+T E N ++ +++ P + G GS+V +SS+ P S Y K A+ LTK LA E A NIR N +AP +IKTS + E E + R I R GEP++ + +V LC Sbjct: 8 RRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAEDRERLVATAVKL-HGGIDILVSNAAVNPFFGSLMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPGLIKTSFSRMLWMDKEKEESMKETLR---IRRLGEPEDCAGIVSFLC 238
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: DHRS4_HUMAN (Dehydrogenase/reductase SDR family member 4 OS=Homo sapiens GN=DHRS4 PE=1 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 6.184e-28 Identity = 82/235 (34.89%), Postives = 118/235 (50.21%), Query Frame = 3 Query: 21 KRWSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGILC 722 +R L ALVT T GIG A LA+ GA V SR Q +D + + +G VTG+VC + E RE+L+ T + G ++IL++NAA+ F +D+T E N ++ +++ P + G GS+V +SS+ P S Y K A+ LTK LA E A NIR N +AP +IKTS + E E + R I R GEP++ + +V LC Sbjct: 8 RRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAEDRERLVATAVKL-HGGIDILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPGLIKTSFSRMLWMDKEKEESMKETLR---IRRLGEPEDCAGIVSFLC 238 The following BLAST results are available for this feature:
BLAST of CX300573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300573 ID=CX300573; Name=CX300573; organism=Citrus clementina; type=EST; length=729bpback to top |