CX300573

Overview
NameCX300573
Unique NameCX300573
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length729
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: CBR4_XENTR (Carbonyl reductase family member 4 OS=Xenopus tropicalis GN=cbr4 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.094e-16
Identity = 70/219 (31.96%), Postives = 105/219 (47.95%), Query Frame = 3
Query:   54 VTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLV 710
            V GG+RGIG A  + LA+    V   SR   +L+         G  +  S CD+S   + +   + +T+   G ++ L+N+A I      +   +ED+ ++ S N        +LA         G+IV I S+ G +G    S+YGA K  +   +K+LA E AK NIR N VAP  I T M    EE        D + +  P+GR G+P+EV+  V
Sbjct:    7 VFGGSRGIGKAVSKLLAQRDYKVAVISR---DLEVAKAAAAEVGAHLALS-CDVSKENEIQDTFKEITNNL-GNVDYLVNSAGIRRDALLLRTRSEDIRSLLSVNLVGTIQTCKLALRSMIQQQGGAIVNIGSIVGHKGNIGQSIYGASKEGLIGFSKSLAKEVAKRNIRVNVVAPGFIHTDMTLGLEE--------DSLTKMVPLGRFGDPEEVAQSV 212          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: BAIA2_EUBSP (Bile acid 7-dehydroxylase 2 OS=Eubacterium sp. (strain VPI 12708) GN=baiA2 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.429e-16
Identity = 67/221 (30.32%), Postives = 105/221 (47.51%), Query Frame = 3
Query:   51 LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN--KGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSL 707
            ++TGGTRGIG A  +     GA V      Q E+D  L + K      +V G   DL+SR+     +  V   + G+L+++INNA I        ++ E+   +   N   VF+ +  A+   K +  G I+  +SV G+ G  S   Y A K ++  LT  L  E  + NIR   VAP V+ T M           E ++G  +  P+ R  EP+E++++
Sbjct:   10 IITGGTRGIGFAAAKIFIDNGAKVSIFGETQEEVDTALAQLKELYPEEEVLGFAPDLTSRDAVMAAVGQVAQKY-GRLDVMINNAGITSNNVFSRVSEEEFKHIMDINVTGVFNGAWCAYQCMKDAKKGVIINTASVTGIFGSLSGVGYPASKASVIGLTHGLGREIIRKNIRVVGVAPGVVNTDM-----TNGNPPEIMEGYLKALPMKRMLEPEEIANV 224          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: SOU1_CANAL (Sorbose reductase SOU1 OS=Candida albicans GN=SOU1 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.438e-16
Identity = 68/234 (29.06%), Postives = 109/234 (46.58%), Query Frame = 3
Query:   27 WSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVK-PTVDITAEDM-STVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG-VRGIPSVSL-YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQ-----TPIGRAGEPDEV 698
            +SL G  A VTG + GIG A  E  A+ GA V     N    DA+      K G K     C+++      K+I  +   F G ++I + NA +A+   P +D+   D    +   +   V++ +     +FK + +GS++  SS+ G +  IP +   Y A K A   L K+L+ EWA    R N+++P  I T +          ++F D   ++     TP+GR G P E+
Sbjct:   31 FSLKGKVASVTGSSGGIGWAVAEAFAQAGADV-AIWYNSKPADAKAEYLTEKYGVKAKAYKCNVTDPNDVSKVINEIEKDF-GTIDIFVANAGVAWTDGPEIDVQGYDQWKKIVDCDLNGVYYCAHTVGQIFKKNKSGSLIITSSMSGTIVNIPQLQAPYNAAKAACTHLAKSLSVEWASFGARVNSISPGYILTDI----------ADFADPEMKKKWWQLTPLGREGLPQEL 252          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: FABG_MYCTU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Mycobacterium tuberculosis GN=fabG PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.438e-16
Identity = 64/225 (28.44%), Postives = 101/225 (44.89%), Query Frame = 3
Query:   45 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            + LVTGG RGIG A  + LA  G  V           A  H        + G  CD++  +  ++   T     QG + +L++NA ++     + +T E    V + N    F ++Q A    + +  G ++FI SV G  GI + + Y A K  +  + +++A E +K N+  N VAP  I T M +  +E         G  +  P  R G P EV+ +V  L
Sbjct:   17 SVLVTGGNRGIGLAIAQRLAADGHKV-----------AVTHRGSGAPKGLFGVECDVTDSDAVDRAF-TAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDE-----RIQQGALQFIPAKRVGTPAEVAGVVSFL 224          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: FABG_MYCBO (3-oxoacyl-[acyl-carrier-protein] reductase OS=Mycobacterium bovis GN=fabG PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.438e-16
Identity = 64/225 (28.44%), Postives = 101/225 (44.89%), Query Frame = 3
Query:   45 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            + LVTGG RGIG A  + LA  G  V           A  H        + G  CD++  +  ++   T     QG + +L++NA ++     + +T E    V + N    F ++Q A    + +  G ++FI SV G  GI + + Y A K  +  + +++A E +K N+  N VAP  I T M +  +E         G  +  P  R G P EV+ +V  L
Sbjct:   17 SVLVTGGNRGIGLAIAQRLAADGHKV-----------AVTHRGSGAPKGLFGVECDVTDSDAVDRAF-TAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDE-----RIQQGALQFIPAKRVGTPAEVAGVVSFL 224          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: KDUD_DICD3 (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=Dickeya dadantii (strain 3937) GN=kduD PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.184e-16
Identity = 67/226 (29.65%), Postives = 107/226 (47.35%), Query Frame = 3
Query:   27 WSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ-LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGS-EFLDGIARQTPIGRAGEPDEV 698
            ++L G  AL+TG   G+G      LA  G  +     N +E    + +    G +      D+S       L+E   + F GK++IL+NNA I   +  ++ + ++   V + N +SVF +SQ +A    K    G I+ I+S+   +G   V  Y A K  +  +T+ +A EWAK NI  N +AP  + T+  +      + S E LD I    P GR G P ++
Sbjct:    6 FNLQGKVALITGCDTGLGQGMAVGLAEAGCDI--VGVNIVEPKETIEKVTAVGRRFLSLTADMSDISGHAALVEKAVAEF-GKVDILVNNAGIIRREDAIEFSEKNWDDVMNLNIKSVFFMSQTVARQFIKQGHGGKIINIASMLSFQGGIPVPSYTASKKRVMGITRIVANEWAKHNINVNAIAPGYMATNNTQHVRADQDRSKEILDRI----PAGRWGLPQDL 224          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: HSD_MYCTU (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Mycobacterium tuberculosis GN=fabG3 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.184e-16
Identity = 71/226 (31.42%), Postives = 105/226 (46.46%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLV 710
            L G  ALV+GG RG+G + V  +   GA V        E  A   E  +    V     D++   Q    ++T  + F G L++L+NNA I  +    D    +   +   N   VF   +      K +G GSI+ ISS+ G+ G  +   Y A K A+  LTK+ A E     IR N++ P ++KT M          ++++     QT +GRA EP EVS+LV
Sbjct:    5 LIGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAVAAELADAARYVH---LDVTQPAQWTAAVDTAVTAFGG-LHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPM----------TDWVPEDIFQTALGRAAEPVEVSNLV 216          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: HSD_MYCBO (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Mycobacterium bovis GN=fabG3 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.184e-16
Identity = 71/226 (31.42%), Postives = 105/226 (46.46%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLV 710
            L G  ALV+GG RG+G + V  +   GA V        E  A   E  +    V     D++   Q    ++T  + F G L++L+NNA I  +    D    +   +   N   VF   +      K +G GSI+ ISS+ G+ G  +   Y A K A+  LTK+ A E     IR N++ P ++KT M          ++++     QT +GRA EP EVS+LV
Sbjct:    5 LIGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAVAAELADAARYVH---LDVTQPAQWTAAVDTAVTAFGG-LHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPM----------TDWVPEDIFQTALGRAAEPVEVSNLV 216          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: FABG_VIBHA (3-oxoacyl-[acyl-carrier-protein] reductase OS=Vibrio harveyi GN=fabG PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.184e-16
Identity = 67/230 (29.13%), Postives = 102/230 (44.35%), Query Frame = 3
Query:   30 SLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            +L G  ALVTG +RGIG A  E L   GA V   + ++    A        G  +  +V D+ S E   K I        G ++IL+NNA I      + +  ++ + + +TN   ++ +S+           G I+ + SV G  G    + Y A K  +   TK++A E A   +  NTVAP  I+T M K   +    +          P GR G+P E++S V  L
Sbjct:    2 NLEGKIALVTGASRGIGRAIAELLVERGATVIGTATSEGGAAAISEYLGENGKGLALNVTDVESIEATLKTINDEC----GAIDILVNNAGITRDNLLMRMKDDEWNDIINTNLTPIYRMSKAVLRGMMKKRAGRIINVGSVVGTMGNAGQTNYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDDQRAATL-----SNVPAGRLGDPREIASAVVFL 222          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: STCU_EMENI (Versicolorin reductase OS=Emericella nidulans GN=stcU PE=3 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 4.158e-16
Identity = 71/239 (29.71%), Postives = 107/239 (44.77%), Query Frame = 3
Query:   27 WSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARL-HEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF--EEGPEGSEFLDG-----IARQTPIGRAGEPDEVSSLVGIL 719
            + L+G  ALVTG  RGIG A    L + GA V     N  E   ++  E K+ G        D+   +   KL++     F G L+I+ +NA I       D+T ++   V   N    F +++ A+   +  G   I+  S+   V+G+P  ++Y   KGA++   + LA +     I  N VAP  IKT M      E  P G  F D       A  +P+ R G P +V+ +V  L
Sbjct:    7 YRLDGKVALVTGAGRGIGAAIAVALGQRGAKVVVNYANSREAAEKVVDEIKSNGSDAISIQADVGDPDAVTKLMDQAVEHF-GYLDIVSSNAGIVSFGHVKDVTPDEFDRVFRVNTRGQFFVAREAYRHLREGGR-IILTSSNTASVKGVPRHAVYSGSKGAIDTFVRCLAIDCGDKKITVNAVAPGAIKTDMFLSVSREYIPNGETFTDEQVDECAAWLSPLNRVGLPVDVARVVSFL 243          
The following BLAST results are available for this feature:
BLAST of CX300573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 263
Match NameE-valueIdentityDescription
CBR4_XENTR1.094e-1631.96Carbonyl reductase family member 4 OS=Xenopus trop... [more]
BAIA2_EUBSP1.429e-1630.32Bile acid 7-dehydroxylase 2 OS=Eubacterium sp. (st... [more]
SOU1_CANAL2.438e-1629.06Sorbose reductase SOU1 OS=Candida albicans GN=SOU1... [more]
FABG_MYCTU2.438e-1628.443-oxoacyl-[acyl-carrier-protein] reductase OS=Myco... [more]
FABG_MYCBO2.438e-1628.443-oxoacyl-[acyl-carrier-protein] reductase OS=Myco... [more]
KDUD_DICD33.184e-1629.652-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=D... [more]
HSD_MYCTU3.184e-1631.423-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
HSD_MYCBO3.184e-1631.423-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
FABG_VIBHA3.184e-1629.133-oxoacyl-[acyl-carrier-protein] reductase OS=Vibr... [more]
STCU_EMENI4.158e-1629.71Versicolorin reductase OS=Emericella nidulans GN=s... [more]

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Properties
Property NameValue
Genbank descriptionC07011G12SK SaltLeaf1 Citrus clementina cDNA clone C07011G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300573 ID=CX300573; Name=CX300573; organism=Citrus clementina; type=EST; length=729bp
AAGAGCTCATTCGTAGAAACAAAAGATGGTCTCTCAATGGAATGACTGCT
TTAGTCACTGGAGGAACCCGAGGCATAGGGCATGCTACTGTAGAAGAATT
AGCAAGATTTGGAGCAATTGTTCACACATGTTCACGTAATCAAATTGAGC
TCGATGCACGTTTACATGAATGGAAAAACAAAGGGTTCAAAGTAACGGGG
TCAGTATGTGACCTGTCATCCCGCGAACAGCGTGAGAAGCTAATAGAGAC
TGTCACCTCCATCTTTCAGGGGAAGCTCAACATTCTTATAAACAATGCTG
CAATAGCTTTCGTAAAACCAACGGTGGATATTACAGCTGAGGACATGTCA
ACTGTAAGCAGCACAAATTTCGAGTCTGTTTTTCATCTGTCTCAACTAGC
ACATCCTCTGTTTAAAGCATCAGGGAATGGAAGTATCGTATTTATTTCCT
CTGTTGGGGGCGTTAGAGGAATACCTTCTGTTTCTCTGTATGGTGCATAC
AAAGGAGCCATGAATCAACTAACGAAGAATTTGGCATGCGAGTGGGCAAA
GGATAACATCCGTACTAATACAGTTGCACCCTGGGTTATTAAAACCTCAA
TGATCAAACCTTTTGAGGAAGGTCCTGAAGGAAGTGAATTTCTGGATGGA
ATAGCACGTCAAACACCCATCGGTCGAGCTGGAGAGCCTGATGAGGTTTC
TTCATTGGTGGGCATTCTTTGCCTTCAGC
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