CX300573

Overview
NameCX300573
Unique NameCX300573
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length729
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: YVRD_BACSU (Uncharacterized oxidoreductase yvrD OS=Bacillus subtilis GN=yvrD PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.430e-16
Identity = 59/191 (30.89%), Postives = 89/191 (46.60%), Query Frame = 3
Query:   51 LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEG 623
            L+TG T GIG A  +   + GA V    R Q  +D  + E    G  V G+  DLS  ++    IE V  I  G ++IL+NN     VK   D+T E+ +     N  S    S+   P   A  +G I+ I+S  GV+ +P++  Y   K A+  L++ +A      N+  N+V P    T  +  + EG
Sbjct:   11 LITGSTSGIGKAAAKSFLQEGAAVIVNGRKQETVDRTIEELSGYG-TVHGAAADLSKTDEAAAFIEKVNEI--GDIDILVNNLGFFEVKDFADVTDEEWNQYFEVNVMSAVRTSRHFLPKMLAKNSGRILNIASEAGVKPLPTMIPYSMTKTALISLSRGMAEMTKGTNVTVNSVLPGPTWTEGVASYMEG 198          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: YF3H_SCHPO (Uncharacterized oxidoreductase C22A12.17c OS=Schizosaccharomyces pombe GN=SPAC22A12.17c PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.092e-16
Identity = 67/227 (29.52%), Postives = 101/227 (44.49%), Query Frame = 3
Query:   30 SLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG-VRGIPSVS-LYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSS 704
            SL G  A+V GG RGIGHA     A  GA             A     +  G K     CD++  ++ E     +  +F   ++I++ N  I   K  +D+T E+ +   + N   VF+++  A P+F+  G+GS+V  +S+ G V  +P     Y   K  + QL K+LA EW K   R N V+P    + M         G +F       TP  R G   E++S
Sbjct:   18 SLKGKNAVVFGGARGIGHAICSVFAEAGANAFIVYNTTPGEKAAKEIAQANGVKTYTCKCDVTIPKEVEHAFAEIQKVFD-TIDIVVPNNGICTGKSAIDMTYEEFANEINVNLLGVFNVAHNAGPIFQKQGHGSLVATASMSGVVVNVPQQQCAYNTSKAGVIQLIKSLAVEWRK-FARVNCVSPGYTTSDM--------TGGKFHKEWEPYTPFERNGLAKEIAS 234          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: FABG_RICTY (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia typhi GN=fabG PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.092e-16
Identity = 66/227 (29.07%), Postives = 108/227 (47.58%), Query Frame = 3
Query:   39 GMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            G T+L+TG + GIG A    L + G+ V     N+ +L    +  K+        VC+L+++E+   LI  +++     L+IL+ NA I      + +  +D   V   N ++ F L++ A         G I+ ISS+ G+ G P  + Y A K  +  +TK+L+ E A   I  N VAP  IK+ M     E        + I ++ P+G  G P++V+  V  L
Sbjct:    6 GKTSLITGASGGIGSAIARLLHKLGSKVIISGSNEKKLKLLGNTLKDNYII---EVCNLANKEECNNLISKISN-----LDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQR-----EAIVQKIPLGTYGIPEDVAYAVAFL 219          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: DHG2_BACME (Glucose 1-dehydrogenase 2 OS=Bacillus megaterium GN=gdhII PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.092e-16
Identity = 68/237 (28.69%), Postives = 113/237 (47.68%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFG-----AIVHTCSRNQ--IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            L     +VTGG++G+G A      RFG      +V+  S  +  +E+   + E   +   V G   D++  E    L+ET    F G L+++INNA +    P+ +++ E+ + V  TN    F  S+ A   F  +   G+++ +SSV  +   P    Y A KG M  +T+ LA E+A   IR N + P  I T +       PE    ++ +    P+G  G+P+E++S+   L
Sbjct:    5 LKDKVVVVTGGSKGLGRAMA---VRFGQEQSKVVVNYRSNEEEALEVKKEIEEAGGQAIIVRG---DVTKEEDVVNLVETAVKEF-GSLDVMINNAGVENPVPSHELSLENWNQVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAIDTPINAEKFADPEQRADVESM---IPMGYIGKPEEIASVAAFL 231          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: DECR2_DANRE (Peroxisomal 2,4-dienoyl-CoA reductase OS=Danio rerio GN=decr2 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.092e-16
Identity = 72/237 (30.38%), Postives = 105/237 (44.30%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQR--EKLIETVTSIFQ--GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQT-------PIGRAGEPDEVSSLV 710
            L+   A +TGG  GIG    E L R G      SRN      ++ +   K    TG  C   + + R  E ++  V    +  G+++ILINNAA  F+ P   ++     TV   +    F+ S++ +  +     GSIV IS+  G RG       G+ K A + +T++LA EW    +R NTVAP  I          G EG   L G   +T       P+ RAG   E++  V
Sbjct:   33 LSDQVAFITGGGSGIGFRIAEVLMRHGCDTVIASRNL----EKISQAAKKLTSTTGRRCLPIAMDVRQPETILAAVDETLKTFGRVDILINNAAGNFLCPATSLSFNAFKTVMEIDTMGTFNTSKVIYDKWFKDHGGSIVNISATLGYRGQALQVHAGSAKAANDAMTRHLAVEWGPSGVRVNTVAPGPI---------SGTEGYRRLGGSHAETAGAFHSIPLQRAGNKTEMAHAV 256          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: MTDH_UROFA (Probable NADP-dependent mannitol dehydrogenase OS=Uromyces fabae GN=PIG8 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.263e-16
Identity = 64/228 (28.07%), Postives = 107/228 (46.93%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG--NGSIVFISSVGG-VRGIPSVS-LYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVS 701
            L     +VTGG RGIG A  +  A  GA V     +  + + R  E   K G K     CD+  + + +++ + +     G +  LI NA ++ VK  +    +D + +   N   VF+ +Q    ++  +G   GS+V ISS+   +   P     Y + K A++ L K LA EWA+ +IR N ++P  +KT      ++     +  D  A   P+ R  EP+E++
Sbjct:    7 LKDQCIIVTGGNRGIGLAMSQACADAGAAVGIIYNSAKDAEDRASEISKKYGVKCKAYQCDVGQQHKVKEVFKKINEEL-GPVTGLIANAGVSVVKEALQYNKDDFNKIFDVNVFGVFNCAQAMAQIWTDTGFQRGSVVIISSMSSQICNRPLTQCFYNSSKAAVSNLGKCLAAEWAEKSIRVNMLSPGYVKTDQTSHMDQ-----KLRDFQADGVPLKRFAEPEEMA 228          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: BDHA_RALEH (D-beta-hydroxybutyrate dehydrogenase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=hbdH1 PE=3 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 9.263e-16
Identity = 71/236 (30.08%), Postives = 102/236 (43.22%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP-WVIKTSMIKPFE-----EG-PEGSEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            LNG TALVTG T GIG    + LA  GA +        +          +G +V     D+S   + E ++    S F G  +IL+NNA I  V    D   E    + + N  S FH ++LA P  K    G I+ ++S  G+      S Y A K  +   TK  A E A+  +  N + P WV+   + K  E     EG P      + +  + P G+   PDE+ +L   L
Sbjct:    2 LNGKTALVTGSTSGIGLGIAKALAAQGANIIVNGFGDADAAKAEIAQAGQGIRVGYHGADMSKAAEIEDMMRYAQSDFGGA-DILVNNAGIQHVAAIEDFPPERWDAIIAINLTSAFHTTRLALPGMKQKDWGRIINVASTHGLVASAQKSAYVAAKHGIVGFTKVTALETAQTGVTANAICPGWVLTPLVQKQVEARAQKEGIPVEQAKRELVLEKQPSGQFVTPDELGALAVFL 236          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: YVX3_CAEEL (Uncharacterized oxidoreductase T05C12.3 OS=Caenorhabditis elegans GN=T05C12.3 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.580e-15
Identity = 63/236 (26.69%), Postives = 102/236 (43.22%), Query Frame = 3
Query:   30 SLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC-----DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS-QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            +L G  ALVTGG  GIG A     A  GA V   +R   +L+    E      K TG +C     D+          + +   F    +IL+NNAA  F+  T  ++     T+     +   +++ +L     ++    S+  I++     G P +      K  +  +TK+LA EW+K  +R N V+P  I T          E  +  + +    P GR+G P+EV++LV  +
Sbjct:   22 ALKGKVALVTGGGTGIGKAIATTFAHLGASVAIAARRMEKLEQTAEEI----MKTTGGICEPFRMDIKDPGMVSDTFDKIDKKFGKHPDILVNNAAGNFIMATERLSPNAHGTIIDIVLKGTMNVTTELGKRCIQSKTGASVTSITAAYARSGAPFIVPSAVSKAGVEIMTKSLATEWSKYGLRFNAVSPGPIPTKGAWGRLFSGEMGDVAEKMKELNPEGRSGTPEEVANLVAFI 253          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: THR1_GLOLA (Trihydroxynaphthalene reductase OS=Glomerella lagenarium GN=THR1 PE=3 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 1.580e-15
Identity = 70/241 (29.05%), Postives = 109/241 (45.23%), Query Frame = 3
Query:   30 SLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIEL-DARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF--EEGPEGSEFLD-GI----ARQTPIGRAGEPDEVSSLVGILCLQ 728
            SL G  ALVTG  RGIG     EL R GA V     N  E  +  +   K  G        ++S  +Q  K+      I+ G+L+I+ +N+ +       D+T E+   V + N    F +++ A+   +  G   I+  S  G  +G+P  ++Y   KG +    + +A ++    I  N VAP  IKT M +    E  P G E  D G+    A  +P+ R G P +++ +V  L  Q
Sbjct:   26 SLMGKVALVTGAGRGIGREMAMELGRRGAKVIVNYANSAETAEEVVQAIKKSGSDAASIKANVSDVDQIVKMFGEAKQIW-GRLDIVCSNSGVVSFGHVKDVTPEEFDRVFAINTRGQFFVAREAYKHLEVGGR-LILMGSITGQAKGVPKHAVYSGSKGTIETFVRCMAIDFGDKKITVNAVAPGGIKTDMYRDVCREYIPNGGELDDEGVDEFAAGWSPMHRVGLPIDIARVVCFLASQ 264          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: DHRS1_MOUSE (Dehydrogenase/reductase SDR family member 1 OS=Mus musculus GN=Dhrs1 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.580e-15
Identity = 61/214 (28.50%), Postives = 107/214 (50.00%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH--------PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF---EEGPEGSEF 641
            + G   +VTG +RGIG     +L + GA V+   R+   L A   E ++ G +    VCD S   + + L E V    +G+L++L+NN A A V+  ++ T +    V ++ ++ + ++    H         L   +G G IV +SS GG++ + +V  YG  K A ++L  + A E  +  +   ++ P +++T M+K F   E+ PE   F
Sbjct:    5 MKGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRATAQEAQSLGGRCVPVVCDSSQESEVKSLFEQVDREQKGRLDVLVNN-AYAGVQAILNTTNKSFWEVPASIWDDINNVGLRGHYLCSVYGARLMVPAGKGLIVIVSSPGGLQHMFNVP-YGVGKAACDRLAADCAHELRRHGVSYVSLWPGLVQTEMVKEFMAKEDTPEDPLF 216          
The following BLAST results are available for this feature:
BLAST of CX300573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 263
Match NameE-valueIdentityDescription
YVRD_BACSU5.430e-1630.89Uncharacterized oxidoreductase yvrD OS=Bacillus su... [more]
YF3H_SCHPO7.092e-1629.52Uncharacterized oxidoreductase C22A12.17c OS=Schiz... [more]
FABG_RICTY7.092e-1629.073-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
DHG2_BACME7.092e-1628.69Glucose 1-dehydrogenase 2 OS=Bacillus megaterium G... [more]
DECR2_DANRE7.092e-1630.38Peroxisomal 2,4-dienoyl-CoA reductase OS=Danio rer... [more]
MTDH_UROFA9.263e-1628.07Probable NADP-dependent mannitol dehydrogenase OS=... [more]
BDHA_RALEH9.263e-1630.08D-beta-hydroxybutyrate dehydrogenase OS=Ralstonia ... [more]
YVX3_CAEEL1.580e-1526.69Uncharacterized oxidoreductase T05C12.3 OS=Caenorh... [more]
THR1_GLOLA1.580e-1529.05Trihydroxynaphthalene reductase OS=Glomerella lage... [more]
DHRS1_MOUSE1.580e-1528.50Dehydrogenase/reductase SDR family member 1 OS=Mus... [more]

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Properties
Property NameValue
Genbank descriptionC07011G12SK SaltLeaf1 Citrus clementina cDNA clone C07011G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300573 ID=CX300573; Name=CX300573; organism=Citrus clementina; type=EST; length=729bp
AAGAGCTCATTCGTAGAAACAAAAGATGGTCTCTCAATGGAATGACTGCT
TTAGTCACTGGAGGAACCCGAGGCATAGGGCATGCTACTGTAGAAGAATT
AGCAAGATTTGGAGCAATTGTTCACACATGTTCACGTAATCAAATTGAGC
TCGATGCACGTTTACATGAATGGAAAAACAAAGGGTTCAAAGTAACGGGG
TCAGTATGTGACCTGTCATCCCGCGAACAGCGTGAGAAGCTAATAGAGAC
TGTCACCTCCATCTTTCAGGGGAAGCTCAACATTCTTATAAACAATGCTG
CAATAGCTTTCGTAAAACCAACGGTGGATATTACAGCTGAGGACATGTCA
ACTGTAAGCAGCACAAATTTCGAGTCTGTTTTTCATCTGTCTCAACTAGC
ACATCCTCTGTTTAAAGCATCAGGGAATGGAAGTATCGTATTTATTTCCT
CTGTTGGGGGCGTTAGAGGAATACCTTCTGTTTCTCTGTATGGTGCATAC
AAAGGAGCCATGAATCAACTAACGAAGAATTTGGCATGCGAGTGGGCAAA
GGATAACATCCGTACTAATACAGTTGCACCCTGGGTTATTAAAACCTCAA
TGATCAAACCTTTTGAGGAAGGTCCTGAAGGAAGTGAATTTCTGGATGGA
ATAGCACGTCAAACACCCATCGGTCGAGCTGGAGAGCCTGATGAGGTTTC
TTCATTGGTGGGCATTCTTTGCCTTCAGC
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