CX300573

Overview
NameCX300573
Unique NameCX300573
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length729
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: DECR2_ARATH (Peroxisomal 2,4-dienoyl-CoA reductase OS=Arabidopsis thaliana GN=At3g12800 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.638e-14
Identity = 57/192 (29.69%), Postives = 88/192 (45.83%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFK--------ASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKD-NIRTNTVAP 581
            + G  AL+TGG  GIG     +  + GA +    R +  LD  +   ++ G +  G   D+  +E   +++E     F GKL+IL+N AA  F+    D++     TV   +    F++   A    K        +SG GSI+ IS+              A K A++  T+NLA EW  D +IR N +AP
Sbjct:   10 VRGQVALITGGGSGIGFEISSQFGKHGASIAIMGRRKQVLDDAVSALRSLGIQAIGLEGDVRKQEDARRVVEATFQHF-GKLDILVNAAAGNFLAAAEDLSPNGFRTVLDIDAVGTFNMCHAALKYLKKGAPGRDSSSGGGSIINISATLHYTASWYQIHVSAAKAAVDATTRNLALEWGTDYDIRVNGIAP 200          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: Y4EL_RHISN (Uncharacterized short-chain type dehydrogenase/reductase y4eL OS=Rhizobium sp. (strain NGR234) GN=NGR_a03830 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.670e-14
Identity = 69/232 (29.74%), Postives = 103/232 (44.40%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGAI-VHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLF---KASG--NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLV 710
            + GM   V GG  G G  T + + R G   +     NQ  LDA   E   KG ++   V D++  E      +       G++   I  AAI    P ++IT +     ++ N +  +H+   A       KA G  +G IV I+SV   +  P  + Y A K A+  LT++ A  +AKD +  N+VAP  + T   K          FL  +A   P+GRA EP E++  V
Sbjct:    1 MQGMNIAVVGGASGFGLETAKLMVRDGVSKIVVIDINQERLDAAKGELAGKGTEIFTVVRDIARAEGAHASFDAAVKT-AGRIRSSIC-AAIYPRAPLLEITDDMWDAENAINIKGTYHMMVAAVKHMQGHKAEGEVSGRIVNITSVDAFKAHPQNAHYAATKAAVVSLTRSFAHAFAKDQVLINSVAPAGMATEKAKSL-------GFLGELAAANPLGRAAEPAEIAEFV 223          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: Y2403_STAAW (Uncharacterized oxidoreductase MW2403 OS=Staphylococcus aureus (strain MW2) GN=MW2403 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.670e-14
Identity = 50/190 (26.32%), Postives = 93/190 (48.95%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 602
            L    A+VTG   GIG A    L   GA V    RN+ +L    ++      KV  +  D++++E+ ++LI+     F G L+I+IN+A         D   ++  ++   N +   +  Q A P      +G ++ I+S+ G     S ++Y A K A++ +T+ L  E AK  ++  +++P ++ T++
Sbjct:    4 LTDKIAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQNVANQLSQDSVKVVPT--DVTNKEEVDELIKIAQQTF-GGLDIVINSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTVQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAI 190          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: Y2370_STAAS (Uncharacterized oxidoreductase SAS2370 OS=Staphylococcus aureus (strain MSSA476) GN=SAS2370 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.670e-14
Identity = 50/190 (26.32%), Postives = 93/190 (48.95%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 602
            L    A+VTG   GIG A    L   GA V    RN+ +L    ++      KV  +  D++++E+ ++LI+     F G L+I+IN+A         D   ++  ++   N +   +  Q A P      +G ++ I+S+ G     S ++Y A K A++ +T+ L  E AK  ++  +++P ++ T++
Sbjct:    4 LTDKIAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQNVANQLSQDSVKVVPT--DVTNKEEVDELIKIAQQTF-GGLDIVINSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTVQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAI 190          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: T4HR_MAGGR (Tetrahydroxynaphthalene reductase OS=Magnaporthe grisea GN=MGG_02252 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 8.670e-14
Identity = 69/239 (28.87%), Postives = 105/239 (43.93%), Query Frame = 3
Query:   30 SLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF--EEGPEG----SEFLDGIARQ--TPIGRAGEPDEVSSLVGIL 719
            SL G  ALVTG  RGIG     EL R G  V     N  E  +  +   K  G        ++   E   ++ E    IF GKL+I+ +N+ +       D+T E+   V + N    F +++ A+   +  G   I+  S  G  + +P  ++Y   KGA+    + +A + A   I  N VAP  IKT M      E  P G    +E +D  A    +P+ R G P +++ +V  L
Sbjct:   26 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF-GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGR-LILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAASAWSPLHRVGLPIDIARVVCFL 262          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: Y2478_STAAM (Uncharacterized oxidoreductase SAV2478 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV2478 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.132e-13
Identity = 49/190 (25.79%), Postives = 94/190 (49.47%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 602
            L    A+VTG   GIG A    L   GA V    RN+ +L    ++      KV  +  D++++E+ ++L++     F G L+I+IN+A         D   ++  ++   N +   + +Q A P      +G ++ I+S+ G     S ++Y A K A++ +T+ L  E AK  ++  +++P ++ T++
Sbjct:    4 LTDKIAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKDKLQNVANQLAQDSVKVVPT--DVTNKEEVDELMKIAQQTF-GGLDIVINSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAI 190          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: Y2266_STAAN (Uncharacterized oxidoreductase SA2266 OS=Staphylococcus aureus (strain N315) GN=SA2266 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.132e-13
Identity = 49/190 (25.79%), Postives = 94/190 (49.47%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 602
            L    A+VTG   GIG A    L   GA V    RN+ +L    ++      KV  +  D++++E+ ++L++     F G L+I+IN+A         D   ++  ++   N +   + +Q A P      +G ++ I+S+ G     S ++Y A K A++ +T+ L  E AK  ++  +++P ++ T++
Sbjct:    4 LTDKIAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKDKLQNVANQLAQDSVKVVPT--DVTNKEEVDELMKIAQQTF-GGLDIVINSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAI 190          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: HETN_ANASP (Ketoacyl reductase hetN OS=Anabaena sp. (strain PCC 7120) GN=hetN PE=3 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.132e-13
Identity = 55/192 (28.65%), Postives = 91/192 (47.40%), Query Frame = 3
Query:   30 SLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP-WVIKTSM 602
            +L G T L+TG +RG+G      LA+  A V   SR+Q  L    +  K  G K      D+ +  Q   L++    I  G +++LINNA I       + +  ++ ++ +TN  +   L++L  P     G+G IV I+S+ G +G+   S+Y A K  +   T  +  E     +  + V P +V +T M
Sbjct:    3 TLTGKTVLLTGASRGLGVYIARALAKEQATVVCVSRSQSGLAQTCNAVKAAGGKAIAIPFDVRNTSQLSALVQQAQDIV-GPIDVLINNAGIEINGTFANYSLAEIQSIFNTNLLAAMELTRLLLPSMMERGSGRIVNIASLAGKKGVAFNSVYSASKAGLIMWTDAMRQELVGTGVNISVVCPGYVSQTGM 193          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: FABG_MYCAV (3-oxoacyl-[acyl-carrier-protein] reductase OS=Mycobacterium avium GN=fabG PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.132e-13
Identity = 62/225 (27.56%), Postives = 98/225 (43.56%), Query Frame = 3
Query:   45 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            + LVTGG RGIG A  + LA   A  H          A  H        + G  CD++  +  ++    V    QG + +L++NA I+     + +T E  + V + N    F ++Q A    +    G I++I SV G+ GI + + Y A K  +  + ++++ E +K  +  N VAP  I T M +  +E  +      G     P  R G   EV   V  L
Sbjct:   25 SVLVTGGNRGIGLAIAQRLA---AEAHKV--------AVTHRGSGAPDGLFGVECDVTDNDAVDRAFTEVEE-HQGPVEVLVSNAGISKDAFLIRMTEERFTEVINANLTGAFRVTQRAARSMQKKRFGRIIYIGSVSGMWGIGNQANYAAAKAGLIGMARSISRELSKAGVTANVVAPGYIDTEMTRALDERIQA-----GALEFIPAKRVGTAAEVPGAVSFL 232          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: DHR11_CHICK (Dehydrogenase/reductase SDR family member 11 OS=Gallus gallus GN=DHRS11 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.132e-13
Identity = 63/212 (29.72%), Postives = 106/212 (50.00%), Query Frame = 3
Query:   21 KRWSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVT--GSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG--NGSIVFISSVGGVRGIPS--VSLYGAYKGAMNQLTKNLACEW--AKDNIRTNTVAPWVIKTSM-IKPFEEGPE 629
            +RW+  G  ALVTG + GIG A    L + G  V  C+R+  +++    E ++ G+  T     CDLS+ E+   +   + ++ QG +++ INNA +A  +P +    E   T+   N  +V   ++ A+   K     +G I+ I+S+ G   +P   V  Y A K A+  LT+ L  E   AK +IR   ++P +++T    K  +  PE
Sbjct:    2 ERWT--GRVALVTGASVGIGAAVARALVQHGMKVVGCARSVDKIEKLAAECQSAGYPGTLIPYKCDLSNEEEILSMFSAIKTLHQG-VDVCINNAGLARPEPLLSGKTEGWRTMIDVNVMAVSICTREAYQSMKERNIDDGHIININSMNGHSVVPQSVVHFYSATKYAVTALTEGLRQELREAKTHIRATCISPGLVETGFAFKLHDNDPE 210          
The following BLAST results are available for this feature:
BLAST of CX300573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 263
Match NameE-valueIdentityDescription
DECR2_ARATH6.638e-1429.69Peroxisomal 2,4-dienoyl-CoA reductase OS=Arabidops... [more]
Y4EL_RHISN8.670e-1429.74Uncharacterized short-chain type dehydrogenase/red... [more]
Y2403_STAAW8.670e-1426.32Uncharacterized oxidoreductase MW2403 OS=Staphyloc... [more]
Y2370_STAAS8.670e-1426.32Uncharacterized oxidoreductase SAS2370 OS=Staphylo... [more]
T4HR_MAGGR8.670e-1428.87Tetrahydroxynaphthalene reductase OS=Magnaporthe g... [more]
Y2478_STAAM1.132e-1325.79Uncharacterized oxidoreductase SAV2478 OS=Staphylo... [more]
Y2266_STAAN1.132e-1325.79Uncharacterized oxidoreductase SA2266 OS=Staphyloc... [more]
HETN_ANASP1.132e-1328.65Ketoacyl reductase hetN OS=Anabaena sp. (strain PC... [more]
FABG_MYCAV1.132e-1327.563-oxoacyl-[acyl-carrier-protein] reductase OS=Myco... [more]
DHR11_CHICK1.132e-1329.72Dehydrogenase/reductase SDR family member 11 OS=Ga... [more]

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Properties
Property NameValue
Genbank descriptionC07011G12SK SaltLeaf1 Citrus clementina cDNA clone C07011G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300573 ID=CX300573; Name=CX300573; organism=Citrus clementina; type=EST; length=729bp
AAGAGCTCATTCGTAGAAACAAAAGATGGTCTCTCAATGGAATGACTGCT
TTAGTCACTGGAGGAACCCGAGGCATAGGGCATGCTACTGTAGAAGAATT
AGCAAGATTTGGAGCAATTGTTCACACATGTTCACGTAATCAAATTGAGC
TCGATGCACGTTTACATGAATGGAAAAACAAAGGGTTCAAAGTAACGGGG
TCAGTATGTGACCTGTCATCCCGCGAACAGCGTGAGAAGCTAATAGAGAC
TGTCACCTCCATCTTTCAGGGGAAGCTCAACATTCTTATAAACAATGCTG
CAATAGCTTTCGTAAAACCAACGGTGGATATTACAGCTGAGGACATGTCA
ACTGTAAGCAGCACAAATTTCGAGTCTGTTTTTCATCTGTCTCAACTAGC
ACATCCTCTGTTTAAAGCATCAGGGAATGGAAGTATCGTATTTATTTCCT
CTGTTGGGGGCGTTAGAGGAATACCTTCTGTTTCTCTGTATGGTGCATAC
AAAGGAGCCATGAATCAACTAACGAAGAATTTGGCATGCGAGTGGGCAAA
GGATAACATCCGTACTAATACAGTTGCACCCTGGGTTATTAAAACCTCAA
TGATCAAACCTTTTGAGGAAGGTCCTGAAGGAAGTGAATTTCTGGATGGA
ATAGCACGTCAAACACCCATCGGTCGAGCTGGAGAGCCTGATGAGGTTTC
TTCATTGGTGGGCATTCTTTGCCTTCAGC
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