CX300573

Overview
NameCX300573
Unique NameCX300573
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length729
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: CBR4_RAT (Carbonyl reductase family member 4 OS=Rattus norvegicus GN=Cbr4 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.808e-11
Identity = 65/222 (29.28%), Postives = 95/222 (42.79%), Query Frame = 3
Query:   54 VTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            V GG+RGIG A  + +A+ G  +   +RN   L+         G       C+++         E +     G +N L+N A I      V    EDM +   TN        + A       G GSIV + S+ G++G    + Y A KG +   +++LA E A+  IR N VAP  I T M K  +E        +   +  P+GR GE  EV+  V  L
Sbjct:    7 VFGGSRGIGKAVAQLMAQKGYRLAIVARN---LEVAKATASELGGIHLAFRCNIAKEGDVHSTFEEMEK-HLGPVNFLVNAAGINRDSLLVRTKTEDMLSQLHTNLLGTMLTCRAAMRTMIQQG-GSIVNVGSIIGLKGNVGQAAYSATKGGLIGFSRSLAKEVARKKIRVNVVAPGFIHTDMTKHLKE--------EHFKKNIPLGRFGEALEVAHAVVFL 215          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: AYR1_YEAST (NADPH-dependent 1-acyldihydroxyacetone phosphate reductase OS=Saccharomyces cerevisiae GN=AYR1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.361e-11
Identity = 63/210 (30.00%), Postives = 95/210 (45.24%), Query Frame = 3
Query:   48 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-----GKLNILINNAAIAFVKPTVDITAEDMSTVSSTN-FESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI--KPFEEG-----PEGSE 638
            A+VTG + GIG+   +ELAR G +V+ C+R    +     ++ N   K      D+S  E+    I T +   +     GKL++L NNA  +   P +D T   +      N F  +    +L+  L KA G  +IVF  S+ GV   P  S+Y A K A++Q  + L  E    N+R        + T +   +P  E      PEG E
Sbjct:   12 AVVTGASGGIGYEVTKELARNGYLVYACARRLEPMAQLAIQFGNDSIKPYK--LDISKPEE----IVTFSGFLRANLPDGKLDLLYNNAGQSCTFPALDATDAAVEQCFKVNVFGHINMCRELSEFLIKAKG--TIVFTGSLAGVVSFPFGSIYSASKAAIHQYARGLHLEMKPFNVRVINAITGGVATDIADKRPLPETSIYNFPEGRE 213          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: FOX2_NEUCR (Peroxisomal hydratase-dehydrogenase-epimerase OS=Neurospora crassa GN=fox-2 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.084e-11
Identity = 66/230 (28.70%), Postives = 102/230 (44.35%), Query Frame = 3
Query:   39 GMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP--WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGILC 722
            G  ALVTGG  GIG A     AR GA V     + +  D  ++E K  G K  G+     S E  + +++     F G+++I++NNA I   K   ++       V + +    + +++ A P F     G ++  +S  G+ G    + Y A K A+   ++ +A E AK NI  NT+AP      T  I P E                 + +A +PD V+ LV  LC
Sbjct:  314 GRVALVTGGGAGIGRAYCLAFARAGASVVV--NDLVNPDDVVNEIKKMGGKAVGAKF---SAEDGDAVVKAAIDAF-GRVDIVVNNAGILRDKAFHNMDDSLWDPVMNVHARGTYKVTKAAWPYFLKQKYGRVLNTTSTSGIYGNFGQANYSAAKCAILGFSRAIALEGAKYNIYVNTIAPNAGTAMTKTILPEE-----------------LVQAFKPDYVAPLVLALC 520          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: FABG_SCHPO (3-oxoacyl-[acyl-carrier-protein] reductase OS=Schizosaccharomyces pombe GN=oar2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.084e-11
Identity = 57/222 (25.68%), Postives = 101/222 (45.50%), Query Frame = 3
Query:   51 LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK-NKGFKVTGSVCDLSSREQREKLIETVTSIFQG-KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGS----IVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEV 698
            L+TGG+ G+G    +  ++ G   H   RN+  L   L      KG + T ++ D+ S       ++ + SIF+  +++ +++ A +      V  + +++ ++  TN  S   LS++A   +  + N      I+ ISS      +P  S+Y A K  +   TK LA E A   IR N ++P  + T M+         S+      ++ PIGR    DE+
Sbjct:    5 LITGGSSGLGKRIAQIWSQKGHQCHIVGRNEFHLKETLQSLSVAKGQQHTLTIADVQSD------MKNLKSIFESVEIDTVVHAAGVLQSSLCVRTSEKEIDSIICTNLVSAIKLSKMAILEWFRNKNSERDRLILNISSRLSTYALPGTSVYAASKAGLESFTKVLAAEVASKGIRVNAISPGYVDTPML--------SSQIRAIAEKKVPIGRLASTDEI 212          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: YI13_SCHPO (Uncharacterized oxidoreductase C521.03 OS=Schizosaccharomyces pombe GN=SPAC521.03 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.027e-11
Identity = 51/191 (26.70%), Postives = 93/191 (48.69%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGAI-VHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKT 596
            L+G T L+TG + GIG +T  E+A+   + +   +R    ++    E ++K    V     D+S  +    +IE++   F   +++LINNA +A      +D+  +D  T+ +TN   +  +++   P+F +   G I+ + S+ G       S+Y + K A+ Q T  L  E     IR   V P +++T
Sbjct:    4 LDGKTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAKELESKYEVSVLPLKLDVSDLKSIPGVIESLPKEF-ADIDVLINNAGLALGTDKVIDLNIDDAVTMITTNVLGMMAMTRAVLPIFYSKNKGDILNVGSIAGRESYVGGSVYCSTKSALAQFTSALRKETIDTRIRIMEVDPGLVET 193          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: DHRS7_DROME (Dehydrogenase/reductase SDR family protein 7-like OS=Drosophila melanogaster GN=CG7601 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.027e-11
Identity = 58/198 (29.29%), Postives = 89/198 (44.95%), Query Frame = 3
Query:   24 RWSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK----NKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMST-VSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 602
            R  L G   L+TG + G+G +      R G  V   +R   EL+    +      +  +  T    DL+      + +  V +++  +++ILINN  I+ V+  V  TA D+   V   N+     L++   P     G+G I FISSV G   IP  + Y A K AM     +L  E A  NI  + V+P  I+T +
Sbjct:   48 RNQLPGKVVLITGASSGLGESLAHVFYRAGCRVILAARRTQELERVKKDLLALDVDPAYPPTVLPLDLAELNSIPEFVTRVLAVYN-QVDILINNGGIS-VRADVASTAVDVDLKVMVVNYFGSVALTKALLPSMVKRGSGHICFISSVQGKFAIPQRAAYSASKHAMQAFADSLRAEVANKNINVSCVSPGYIRTQL 243          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: DHGB_BACME (Glucose 1-dehydrogenase B OS=Bacillus megaterium GN=gdhB PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.260e-11
Identity = 60/229 (26.20%), Postives = 104/229 (45.41%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVR-GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSL 707
            L G   ++TG + G+G +     A   A  +V+  S+          E K  G +      D++       L+++    F GKL+++INNA +     + +++  D + V  TN    F  S+ A   F  +   G+++ +SSV   +   P    Y A KG M  +T+ LA E+A   IR N + P  I T +       PE    ++ +    P+G  GEP+E++++
Sbjct:    5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF-GKLDVMINNAGMENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEWKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESM---IPMGYIGEPEEIAAV 229          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: UXUB_BACSU (Uncharacterized oxidoreductase uxuB OS=Bacillus subtilis GN=uxuB PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11
Identity = 64/240 (26.67%), Postives = 102/240 (42.50%), Query Frame = 3
Query:   30 SLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNA------AIAFV---------KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEG--SEFLDGIARQTPIGRAGEPDEV 698
            +L G TA++TGG+  +  A   ELAR G  V   +R   +  A + E    G        D+  R   E+  E +   F G +++LIN A      AI  V         +   D+      TV STNF   F  SQ+       + + +I+ +SS+     +  V  Y A K ++N  T  +A  +A+  +R N +AP    T          +G  +     I   TP+ R G+P+++
Sbjct:    7 NLAGKTAVITGGSGVLCSAMARELARHGMKVAILNRTAEKGQAVVKEITAAGGTACAVAADVLDRMSLERAKEDILGQF-GAVDLLINGAGGNHPDAITDVETYEEAGEGQSFFDMDERGFLTVFSTNFTGAFLASQVFGKELLKADSPAIINLSSMSAYSPMTKVPAYSAAKASINNFTMWMAVHFAETGLRVNAIAPGFFLTKQNHDLLINQDGTFTSRSHKIIAGTPMKRFGKPEDL 245          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: MTDH_CLAHE (Probable NADP-dependent mannitol dehydrogenase OS=Cladosporium herbarum PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11
Identity = 57/197 (28.93%), Postives = 87/197 (44.16%), Query Frame = 3
Query:   30 SLNGMTALVTG--GTRGIGHATVEELARFGAIVHT--CSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG-VRGIP-SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 602
            SL G   +VTG  G +G+G       A  GA V     SR Q   +      K  G K     C + S E  EKL++ V + F G+++  I NA        +D + E  + V   +    FH ++     FK  G GS+V  +S+ G +   P   + Y   K     + ++LA EW +D  R N+++P  I T +
Sbjct:   17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADF-GQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEW-RDFARVNSISPGYIDTGL 211          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: 3BHD_COMTE (3-beta-hydroxysteroid dehydrogenase OS=Comamonas testosteroni PE=1 SV=5)

HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11
Identity = 69/228 (30.26%), Postives = 94/228 (41.23%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDN--IRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLV 710
            L G  ALVTGG  G+G   V+ L   GA V     N+        E   +   V   V    S E    L+        G LN+L+NNA I           ED S +   N ESVF   Q      K +G GSI+ ++SV     I   + Y A K A++ LT+  A    K    IR N++ P  I T M++         E +    +    GRA  P+ ++ LV
Sbjct:    5 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDV----SSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLV 227          
The following BLAST results are available for this feature:
BLAST of CX300573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 263
Match NameE-valueIdentityDescription
CBR4_RAT1.808e-1129.28Carbonyl reductase family member 4 OS=Rattus norve... [more]
AYR1_YEAST2.361e-1130.00NADPH-dependent 1-acyldihydroxyacetone phosphate r... [more]
FOX2_NEUCR3.084e-1128.70Peroxisomal hydratase-dehydrogenase-epimerase OS=N... [more]
FABG_SCHPO3.084e-1125.683-oxoacyl-[acyl-carrier-protein] reductase OS=Schi... [more]
YI13_SCHPO4.027e-1126.70Uncharacterized oxidoreductase C521.03 OS=Schizosa... [more]
DHRS7_DROME4.027e-1129.29Dehydrogenase/reductase SDR family protein 7-like ... [more]
DHGB_BACME5.260e-1126.20Glucose 1-dehydrogenase B OS=Bacillus megaterium G... [more]
UXUB_BACSU6.869e-1126.67Uncharacterized oxidoreductase uxuB OS=Bacillus su... [more]
MTDH_CLAHE6.869e-1128.93Probable NADP-dependent mannitol dehydrogenase OS=... [more]
3BHD_COMTE6.869e-1130.263-beta-hydroxysteroid dehydrogenase OS=Comamonas t... [more]

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Properties
Property NameValue
Genbank descriptionC07011G12SK SaltLeaf1 Citrus clementina cDNA clone C07011G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300573 ID=CX300573; Name=CX300573; organism=Citrus clementina; type=EST; length=729bp
AAGAGCTCATTCGTAGAAACAAAAGATGGTCTCTCAATGGAATGACTGCT
TTAGTCACTGGAGGAACCCGAGGCATAGGGCATGCTACTGTAGAAGAATT
AGCAAGATTTGGAGCAATTGTTCACACATGTTCACGTAATCAAATTGAGC
TCGATGCACGTTTACATGAATGGAAAAACAAAGGGTTCAAAGTAACGGGG
TCAGTATGTGACCTGTCATCCCGCGAACAGCGTGAGAAGCTAATAGAGAC
TGTCACCTCCATCTTTCAGGGGAAGCTCAACATTCTTATAAACAATGCTG
CAATAGCTTTCGTAAAACCAACGGTGGATATTACAGCTGAGGACATGTCA
ACTGTAAGCAGCACAAATTTCGAGTCTGTTTTTCATCTGTCTCAACTAGC
ACATCCTCTGTTTAAAGCATCAGGGAATGGAAGTATCGTATTTATTTCCT
CTGTTGGGGGCGTTAGAGGAATACCTTCTGTTTCTCTGTATGGTGCATAC
AAAGGAGCCATGAATCAACTAACGAAGAATTTGGCATGCGAGTGGGCAAA
GGATAACATCCGTACTAATACAGTTGCACCCTGGGTTATTAAAACCTCAA
TGATCAAACCTTTTGAGGAAGGTCCTGAAGGAAGTGAATTTCTGGATGGA
ATAGCACGTCAAACACCCATCGGTCGAGCTGGAGAGCCTGATGAGGTTTC
TTCATTGGTGGGCATTCTTTGCCTTCAGC
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