CX300627

Overview
NameCX300627
Unique NameCX300627
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length263
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX300627 vs. ExPASy Swiss-Prot
Match: H2AZ_MAGGR (Histone H2A.Z OS=Magnaporthe grisea GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 2.672e-12
Identity = 31/54 (57.41%), Postives = 34/54 (62.96%), Query Frame = 2 
Query:   56 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGN 217
            S S+RAGLQFP GRV R LK+              Y  A+LEYLTAEVLELAGN
Sbjct:   28 SHSARAGLQFPCGRVKRFLKQNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGN 81

HSP 2 Score: 31.5722 bits (70), Expect = 2.672e-12
Identity = 13/17 (76.47%), Postives = 16/17 (94.12%), Query Frame = 3 
Query:  213 GMASRDLRVKRITPRHL 263
            G A++DL+VKRITPRHL
Sbjct:   80 GNAAKDLKVKRITPRHL 96
[Close]
BLAST of CX300627 vs. ExPASy Swiss-Prot
Match: H2AZ_PICST (Histone H2A.Z OS=Pichia stipitis GN=HTZ1 PE=3 SV=2)

HSP 1 Score: 59.3066 bits (142), Expect = 2.679e-12
Identity = 31/54 (57.41%), Postives = 34/54 (62.96%), Query Frame = 2 
Query:   56 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGN 217
            S S+RAGLQFPVGR+ R LK               Y  A+LEYLTAEVLELAGN
Sbjct:   23 SHSARAGLQFPVGRIKRYLKRTAQNKIRVGSKSAIYLTAVLEYLTAEVLELAGN 76

HSP 2 Score: 31.5722 bits (70), Expect = 2.679e-12
Identity = 13/17 (76.47%), Postives = 16/17 (94.12%), Query Frame = 3 
Query:  213 GMASRDLRVKRITPRHL 263
            G A++DL+VKRITPRHL
Sbjct:   75 GNAAKDLKVKRITPRHL 91
[Close]
BLAST of CX300627 vs. ExPASy Swiss-Prot
Match: H2AZ_PICGU (Histone H2A.Z OS=Pichia guilliermondii GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 2.679e-12
Identity = 31/54 (57.41%), Postives = 34/54 (62.96%), Query Frame = 2 
Query:   56 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGN 217
            S S+RAGLQFPVGR+ R LK               Y  A+LEYLTAEVLELAGN
Sbjct:   23 SHSARAGLQFPVGRIKRYLKRSAQNKVRVGSKSAIYLTAVLEYLTAEVLELAGN 76

HSP 2 Score: 31.5722 bits (70), Expect = 2.679e-12
Identity = 13/17 (76.47%), Postives = 16/17 (94.12%), Query Frame = 3 
Query:  213 GMASRDLRVKRITPRHL 263
            G A++DL+VKRITPRHL
Sbjct:   75 GNAAKDLKVKRITPRHL 91
[Close]
BLAST of CX300627 vs. ExPASy Swiss-Prot
Match: H2AZ_DEBHA (Histone H2A.Z OS=Debaryomyces hansenii GN=HTZ1 PE=3 SV=3)

HSP 1 Score: 59.3066 bits (142), Expect = 2.679e-12
Identity = 31/54 (57.41%), Postives = 34/54 (62.96%), Query Frame = 2 
Query:   56 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGN 217
            S S+RAGLQFPVGR+ R LK               Y  A+LEYLTAEVLELAGN
Sbjct:   23 SHSARAGLQFPVGRIKRYLKRTAQNKIRVGSKSAIYLTAVLEYLTAEVLELAGN 76

HSP 2 Score: 31.5722 bits (70), Expect = 2.679e-12
Identity = 13/17 (76.47%), Postives = 16/17 (94.12%), Query Frame = 3 
Query:  213 GMASRDLRVKRITPRHL 263
            G A++DL+VKRITPRHL
Sbjct:   75 GNAAKDLKVKRITPRHL 91
[Close]
BLAST of CX300627 vs. ExPASy Swiss-Prot
Match: H2AZ_YEAST (Histone H2A.Z OS=Saccharomyces cerevisiae GN=HTZ1 PE=1 SV=3)

HSP 1 Score: 58.9214 bits (141), Expect = 3.476e-12
Identity = 31/54 (57.41%), Postives = 34/54 (62.96%), Query Frame = 2 
Query:   56 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGN 217
            S S+RAGLQFPVGR+ R LK               Y  A+LEYLTAEVLELAGN
Sbjct:   24 SSSARAGLQFPVGRIKRYLKRHATGRTRVGSKAAIYLTAVLEYLTAEVLELAGN 77

HSP 2 Score: 31.5722 bits (70), Expect = 3.476e-12
Identity = 13/17 (76.47%), Postives = 16/17 (94.12%), Query Frame = 3 
Query:  213 GMASRDLRVKRITPRHL 263
            G A++DL+VKRITPRHL
Sbjct:   76 GNAAKDLKVKRITPRHL 92
[Close]
BLAST of CX300627 vs. ExPASy Swiss-Prot
Match: H2AZ_NEOFI (Histone H2A.Z OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=htz1 PE=3 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 9.879e-12
Identity = 30/54 (55.56%), Postives = 33/54 (61.11%), Query Frame = 2 
Query:   56 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGN 217
            S S++AGLQFP GRV R LK               Y  A+LEYLTAEVLELAGN
Sbjct:   25 SHSAKAGLQFPCGRVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGN 78

HSP 2 Score: 31.5722 bits (70), Expect = 9.879e-12
Identity = 13/17 (76.47%), Postives = 16/17 (94.12%), Query Frame = 3 
Query:  213 GMASRDLRVKRITPRHL 263
            G A++DL+VKRITPRHL
Sbjct:   77 GNAAKDLKVKRITPRHL 93
[Close]
BLAST of CX300627 vs. ExPASy Swiss-Prot
Match: H2AZ_ASPOR (Histone H2A.Z OS=Aspergillus oryzae GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 9.879e-12
Identity = 30/54 (55.56%), Postives = 33/54 (61.11%), Query Frame = 2 
Query:   56 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGN 217
            S S++AGLQFP GRV R LK               Y  A+LEYLTAEVLELAGN
Sbjct:   25 SHSAKAGLQFPCGRVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGN 78

HSP 2 Score: 31.5722 bits (70), Expect = 9.879e-12
Identity = 13/17 (76.47%), Postives = 16/17 (94.12%), Query Frame = 3 
Query:  213 GMASRDLRVKRITPRHL 263
            G A++DL+VKRITPRHL
Sbjct:   77 GNAAKDLKVKRITPRHL 93
[Close]
BLAST of CX300627 vs. ExPASy Swiss-Prot
Match: H2AZ_ASPNC (Histone H2A.Z OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 9.879e-12
Identity = 30/54 (55.56%), Postives = 33/54 (61.11%), Query Frame = 2 
Query:   56 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGN 217
            S S++AGLQFP GRV R LK               Y  A+LEYLTAEVLELAGN
Sbjct:   25 SHSAKAGLQFPCGRVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGN 78

HSP 2 Score: 31.5722 bits (70), Expect = 9.879e-12
Identity = 13/17 (76.47%), Postives = 16/17 (94.12%), Query Frame = 3 
Query:  213 GMASRDLRVKRITPRHL 263
            G A++DL+VKRITPRHL
Sbjct:   77 GNAAKDLKVKRITPRHL 93
[Close]
BLAST of CX300627 vs. ExPASy Swiss-Prot
Match: H2AZ_ASPFU (Histone H2A.Z OS=Aspergillus fumigatus GN=htz1 PE=3 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 9.879e-12
Identity = 30/54 (55.56%), Postives = 33/54 (61.11%), Query Frame = 2 
Query:   56 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGN 217
            S S++AGLQFP GRV R LK               Y  A+LEYLTAEVLELAGN
Sbjct:   25 SHSAKAGLQFPCGRVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGN 78

HSP 2 Score: 31.5722 bits (70), Expect = 9.879e-12
Identity = 13/17 (76.47%), Postives = 16/17 (94.12%), Query Frame = 3 
Query:  213 GMASRDLRVKRITPRHL 263
            G A++DL+VKRITPRHL
Sbjct:   77 GNAAKDLKVKRITPRHL 93
[Close]
BLAST of CX300627 vs. ExPASy Swiss-Prot
Match: H2AZ_ASPCL (Histone H2A.Z OS=Aspergillus clavatus GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 9.879e-12
Identity = 30/54 (55.56%), Postives = 33/54 (61.11%), Query Frame = 2 
Query:   56 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGN 217
            S S++AGLQFP GRV R LK               Y  A+LEYLTAEVLELAGN
Sbjct:   25 SHSAKAGLQFPCGRVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGN 78

HSP 2 Score: 31.5722 bits (70), Expect = 9.879e-12
Identity = 13/17 (76.47%), Postives = 16/17 (94.12%), Query Frame = 3 
Query:  213 GMASRDLRVKRITPRHL 263
            G A++DL+VKRITPRHL
Sbjct:   77 GNAAKDLKVKRITPRHL 93
The following BLAST results are available for this feature:
BLAST of CX300627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
H2AZ_MAGGR2.672e-1257.41Histone H2A.Z OS=Magnaporthe grisea GN=HTZ1 PE=3 S... [more]
H2AZ_PICST2.679e-1257.41Histone H2A.Z OS=Pichia stipitis GN=HTZ1 PE=3 SV=2[more]
H2AZ_PICGU2.679e-1257.41Histone H2A.Z OS=Pichia guilliermondii GN=HTZ1 PE=... [more]
H2AZ_DEBHA2.679e-1257.41Histone H2A.Z OS=Debaryomyces hansenii GN=HTZ1 PE=... [more]
H2AZ_YEAST3.476e-1257.41Histone H2A.Z OS=Saccharomyces cerevisiae GN=HTZ1 ... [more]
H2AZ_NEOFI9.879e-1255.56Histone H2A.Z OS=Neosartorya fischeri (strain ATCC... [more]
H2AZ_ASPOR9.879e-1255.56Histone H2A.Z OS=Aspergillus oryzae GN=HTZ1 PE=3 S... [more]
H2AZ_ASPNC9.879e-1255.56Histone H2A.Z OS=Aspergillus niger (strain CBS 513... [more]
H2AZ_ASPFU9.879e-1255.56Histone H2A.Z OS=Aspergillus fumigatus GN=htz1 PE=... [more]
H2AZ_ASPCL9.879e-1255.56Histone H2A.Z OS=Aspergillus clavatus GN=HTZ1 PE=3... [more]

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Properties
Property NameValue
Genbank descriptionC07012D08SK SaltLeaf1 Citrus clementina cDNA clone C07012D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300627 ID=CX300627; Name=CX300627; organism=Citrus clementina; type=EST; length=263bp
AACAGGCAAAACCACCATTAACAACAACAAGGATAAGGACAAGAAGAAAC
CCGTCTCCCGTTCTTCTCGTGCTGGTCTTCAGTTCCCAGTGGGAAGGGTC
CATCGTCTGCTAAAGGAAAGGGCTGCTGCTCACGGAAGGGTTGGTGCAAC
AGCTGCTGTTTATACAGCAGCCATTTTGGAGTATCTAACTGCCGAAGTGT
TGGAGTTGGCAGGGAATGGCTAGCAGGGATTTGAGGGTCAAACGTATTAC
TCCAAGGCATTTG
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