CX305207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX305207 vs. ExPASy Swiss-Prot
Match: RL9_BOVIN (60S ribosomal protein L9 OS=Bos taurus GN=RPL9 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.853e-27 Identity = 63/93 (67.74%), Postives = 69/93 (74.19%), Query Frame = -2 Query: 281 VYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTI 559 VYAHFPIN I N +EIRNFLGEK +R+V M GV S KDEL+L+GNDIELVS SAALI Q VKNKDIRKFLDGIYVSEK T+ Sbjct: 95 VYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187
BLAST of CX305207 vs. ExPASy Swiss-Prot
Match: RL9_ICTPU (60S ribosomal protein L9 OS=Ictalurus punctatus GN=rpl9 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.161e-27 Identity = 64/97 (65.98%), Postives = 70/97 (72.16%), Query Frame = -2 Query: 269 VYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTILGEE 559 VYAHFPIN I +EIRNFLGEK +R+V M GV S KDELVL+GNDIELVS SAALI Q VKNKDIRKFLDGIYVSEK T++ E Sbjct: 95 VYAHFPINVVIQETGSLVEIRNFLGEKYIRRVRMRPGVNCALSAAQKDELVLEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVVEPE 191
BLAST of CX305207 vs. ExPASy Swiss-Prot
Match: RL9_PONAB (60S ribosomal protein L9 OS=Pongo abelii GN=RPL9 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.128e-27 Identity = 63/93 (67.74%), Postives = 68/93 (73.12%), Query Frame = -2 Query: 281 VYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTI 559 VYAHFPIN I N +EIRNFLGEK +R+V M GV S KDEL+L GNDIELVS SAALI Q VKNKDIRKFLDGIYVSEK T+ Sbjct: 95 VYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILGGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187
BLAST of CX305207 vs. ExPASy Swiss-Prot
Match: RL9_DICDI (60S ribosomal protein L9 OS=Dictyostelium discoideum GN=rpl9 PE=1 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 1.328e-25 Identity = 51/93 (54.84%), Postives = 73/93 (78.49%), Query Frame = -2 Query: 281 VYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTI 559 VYAHFPIN ++ + + +EIRNF GEK VR++++LDG+T R++K KDE+VL GN +EL+S+S A I + +K KD+RKFLDGIYVSE++ + Sbjct: 93 VYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIELLDGITCYRNEKAKDEIVLTGNSLELLSQSCATIQLRSAIKYKDVRKFLDGIYVSERNVL 185
BLAST of CX305207 vs. ExPASy Swiss-Prot
Match: RL9_CAEEL (60S ribosomal protein L9 OS=Caenorhabditis elegans GN=rpl-9 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.734e-25 Identity = 56/94 (59.57%), Postives = 73/94 (77.66%), Query Frame = -2 Query: 278 VYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTIL 559 VYAHFPIN ++ + N+ +EIRNFLGEK VR+V + +GV S KDE+V++GND++ VS++AA I Q VK KDIRKFLDGIYVSEK+TI+ Sbjct: 93 VYAHFPINVTLQDGNRTVEIRNFLGEKIVRRVPLPEGVIATISTAQKDEIVVEGNDVQFVSQAAARIQQSTAVKEKDIRKFLDGIYVSEKTTIV 186
BLAST of CX305207 vs. ExPASy Swiss-Prot
Match: RL9A_SCHPO (60S ribosomal protein L9-A OS=Schizosaccharomyces pombe GN=rpl9a PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.734e-25 Identity = 57/93 (61.29%), Postives = 70/93 (75.27%), Query Frame = -2 Query: 281 VYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTI 559 VYAHFPIN ++ N +EIRNFLGE+ R + L GVTV S VKDE++L+GN +E VS+SAA I Q C+V+NKDIRKFLDGIYVSE+ I Sbjct: 93 VYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTVSISSAVKDEIILEGNSLENVSQSAANIKQICNVRNKDIRKFLDGIYVSERGNI 185
BLAST of CX305207 vs. ExPASy Swiss-Prot
Match: RL9B_SCHPO (60S ribosomal protein L9-B OS=Schizosaccharomyces pombe GN=rpl9b PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 2.958e-25 Identity = 56/93 (60.22%), Postives = 70/93 (75.27%), Query Frame = -2 Query: 281 VYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTI 559 VYAHFPIN ++ N +EIRNFLGE+ R + L GVTV S VKDE++++GN +E VS+SAA I Q C+V+NKDIRKFLDGIYVSE+ I Sbjct: 93 VYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTVSISSAVKDEIIIEGNSLENVSQSAANIKQICNVRNKDIRKFLDGIYVSERGNI 185
BLAST of CX305207 vs. ExPASy Swiss-Prot
Match: RL9B_YEAST (60S ribosomal protein L9-B OS=Saccharomyces cerevisiae GN=RPL9B PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.468e-24 Identity = 58/96 (60.42%), Postives = 72/96 (75.00%), Query Frame = -2 Query: 278 VYAHFPINASIGNNN--KAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTIL 559 VYAHFPIN +I + K IE+RNFLG+KK+R V + DGVT+ S VKDE+VL GN +E VS++AA + Q C V+NKDIRKFLDGIYVS K I+ Sbjct: 93 VYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDGIYVSHKGFIV 188
BLAST of CX305207 vs. ExPASy Swiss-Prot
Match: RL9A_YEAST (60S ribosomal protein L9-A OS=Saccharomyces cerevisiae GN=RPL9A PE=1 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 1.918e-24 Identity = 58/95 (61.05%), Postives = 71/95 (74.74%), Query Frame = -2 Query: 281 VYAHFPINASIGNNN--KAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTI 559 VYAHFPIN +I + K IE+RNFLG+KK+R V + DGVT+ S VKDE+VL GN +E VS++AA + Q C V+NKDIRKFLDGIYVS K I Sbjct: 93 VYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDGIYVSHKGFI 187
BLAST of CX305207 vs. ExPASy Swiss-Prot
Match: RL6_HYPBU (50S ribosomal protein L6P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rpl6p PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.393e-13 Identity = 43/91 (47.25%), Postives = 59/91 (64.84%), Query Frame = -2 Query: 290 VYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKV-KDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEK 559 VY+HFP+ + + IE NFLGEK R ++ GVTV KV KD+++++G DIE V ++AA I Q VK+KD R F+DGIY+ EK Sbjct: 98 VYSHFPVTVKVQGDKVVIE--NFLGEKAPRIAKIMPGVTV----KVQKDDVIVEGIDIEAVGQTAANIEQATKVKDKDRRVFIDGIYIYEK 182 The following BLAST results are available for this feature:
BLAST of CX305207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >CX305207 ID=CX305207; Name=CX305207; organism=Citrus clementina; type=EST; length=560bpback to top |