CX306417
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306417 vs. ExPASy Swiss-Prot
Match: RBM24_XENTR (RNA-binding protein 24 OS=Xenopus tropicalis GN=rbm24 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.135e-11 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 1 Query: 103 RCFVGGLAWATTDSSLHEAFSAYGDILESKITNDRETGRSRGFGFVTFRDEKSMRDAIEGVNGQNLDGRNITVNEA 330 + FVGGL + TTDSSL + F +GDI E+ + DR+TG+SRG+GFVT D + A + N +DGR VN A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of CX306417 vs. ExPASy Swiss-Prot
Match: RBM24_CHICK (RNA-binding protein 24 OS=Gallus gallus GN=RBM24 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 1.135e-11 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 1 Query: 103 RCFVGGLAWATTDSSLHEAFSAYGDILESKITNDRETGRSRGFGFVTFRDEKSMRDAIEGVNGQNLDGRNITVNEA 330 + FVGGL + TTDSSL + F +GDI E+ + DR+TG+SRG+GFVT D + A + N +DGR VN A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of CX306417 vs. ExPASy Swiss-Prot
Match: RB24B_XENLA (RNA-binding protein 24-B OS=Xenopus laevis GN=rbm24-B PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.135e-11 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 1 Query: 103 RCFVGGLAWATTDSSLHEAFSAYGDILESKITNDRETGRSRGFGFVTFRDEKSMRDAIEGVNGQNLDGRNITVNEA 330 + FVGGL + TTDSSL + F +GDI E+ + DR+TG+SRG+GFVT D + A + N +DGR VN A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of CX306417 vs. ExPASy Swiss-Prot
Match: RB24A_XENLA (RNA-binding protein 24-A OS=Xenopus laevis GN=rbm24-A PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.135e-11 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 1 Query: 103 RCFVGGLAWATTDSSLHEAFSAYGDILESKITNDRETGRSRGFGFVTFRDEKSMRDAIEGVNGQNLDGRNITVNEA 330 + FVGGL + TTDSSL + F +GDI E+ + DR+TG+SRG+GFVT D + A + N +DGR VN A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of CX306417 vs. ExPASy Swiss-Prot
Match: HNRGT_MACFA (RNA-binding motif protein, X-linked-like-2 OS=Macaca fascicularis GN=RBMXL2 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.135e-11 Identity = 35/84 (41.67%), Postives = 49/84 (58.33%), Query Frame = 1 Query: 79 MASADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKITNDRETGRSRGFGFVTFRDEKSMRDAIEGVNGQNLDGRNITVNEA 330 M AD + F+GGL T + +L F YG I+E + DRET +SRGF FVTF + + A +NG++LDG+ I V +A Sbjct: 1 MVEADRPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPANAKAAARDMNGKSLDGKAIKVAQA 84
BLAST of CX306417 vs. ExPASy Swiss-Prot
Match: HNRGT_HUMAN (RNA-binding motif protein, X-linked-like-2 OS=Homo sapiens GN=RBMXL2 PE=1 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 1.482e-11 Identity = 35/84 (41.67%), Postives = 48/84 (57.14%), Query Frame = 1 Query: 79 MASADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKITNDRETGRSRGFGFVTFRDEKSMRDAIEGVNGQNLDGRNITVNEA 330 M AD + F+GGL T + +L F YG I+E + DRET +SRGF FVTF + A +NG++LDG+ I V +A Sbjct: 1 MVEADRPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARDMNGKSLDGKAIKVAQA 84
BLAST of CX306417 vs. ExPASy Swiss-Prot
Match: RBM38_HUMAN (RNA-binding protein 38 OS=Homo sapiens GN=RBM38 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 2.528e-11 Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 1 Query: 103 RCFVGGLAWATTDSSLHEAFSAYGDILESKITNDRETGRSRGFGFVTFRDEKSMRDAIEGVNGQNLDGRNITVNEA 330 + FVGGL + TTD+SL + F +GDI E+ + DR+TG+SRG+GFVT D + A + N +DGR VN A Sbjct: 35 KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 109
BLAST of CX306417 vs. ExPASy Swiss-Prot
Match: YHKF_SCHPO (Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe GN=SPBC660.15 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.301e-11 Identity = 31/76 (40.79%), Postives = 47/76 (61.84%), Query Frame = 1 Query: 103 RCFVGGLAWATTDSSLHEAFSAYGDILESKITNDRETGRSRGFGFVTFRDEKSMRDAIEGVNGQNLDGRNITVNEA 330 + F+GGL W TTD SL + F +G++L+ + D TGRSRGFGF+TF++ K + + + +LDG+ I A Sbjct: 164 KMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMS--KEHHLDGKIIDPKRA 237
BLAST of CX306417 vs. ExPASy Swiss-Prot
Match: RBM38_XENTR (RNA-binding protein 38 OS=Xenopus tropicalis GN=rbm38 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.301e-11 Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 1 Query: 103 RCFVGGLAWATTDSSLHEAFSAYGDILESKITNDRETGRSRGFGFVTFRDEKSMRDAIEGVNGQNLDGRNITVNEA 330 + FVGGL + TTD+SL + F +GDI E+ + DR+TG+SRG+GFVT D + A + N +DGR VN A Sbjct: 12 KIFVGGLPYHTTDASLRKYFEVFGDIDEAVVITDRQTGKSRGYGFVTMSDRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of CX306417 vs. ExPASy Swiss-Prot
Match: RBM38_MOUSE (RNA-binding protein 38 OS=Mus musculus GN=Rbm38 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 4.312e-11 Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 1 Query: 103 RCFVGGLAWATTDSSLHEAFSAYGDILESKITNDRETGRSRGFGFVTFRDEKSMRDAIEGVNGQNLDGRNITVNEA 330 + FVGGL + TTD+SL + F +GDI E+ + DR+TG+SRG+GFVT D + A + N +DGR VN A Sbjct: 33 KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAADRACKDPN-PIIDGRKANVNLA 107 The following BLAST results are available for this feature:
BLAST of CX306417 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX306417 ID=CX306417; Name=CX306417; organism=Citrus clementina; type=EST; length=505bpback to top |