CX306417
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306417 vs. ExPASy Swiss-Prot
Match: GRP1_SINAL (Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 1.627e-34 Identity = 68/85 (80.00%), Postives = 78/85 (91.76%), Query Frame = 1 Query: 79 MASADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKITNDRETGRSRGFGFVTFRDEKSMRDAIEGVNGQNLDGRNITVNEAQ 333 MAS DVE+RCFVGGLAWAT D +L AFS YG++L+SKI NDRETGRSRGFGFVTF+DEKSM+DAIEG+NGQ+LDGR+ITVNEAQ Sbjct: 1 MASPDVEYRCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQ 85
BLAST of CX306417 vs. ExPASy Swiss-Prot
Match: GRP1_DAUCA (Glycine-rich RNA-binding protein OS=Daucus carota PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.125e-34 Identity = 68/82 (82.93%), Postives = 75/82 (91.46%), Query Frame = 1 Query: 88 ADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKITNDRETGRSRGFGFVTFRDEKSMRDAIEGVNGQNLDGRNITVNEAQ 333 A+VE+RCFVGGLAWAT D SL +AFS +GDI +SKI NDRETGRSRGFGFVTF+DEKSMRDAIEG+NGQ LDGRNITVNEAQ Sbjct: 2 AEVEYRCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNITVNEAQ 83
BLAST of CX306417 vs. ExPASy Swiss-Prot
Match: GRP7_ARATH (Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana GN=GRP7 PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 3.625e-34 Identity = 66/85 (77.65%), Postives = 78/85 (91.76%), Query Frame = 1 Query: 79 MASADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKITNDRETGRSRGFGFVTFRDEKSMRDAIEGVNGQNLDGRNITVNEAQ 333 MAS DVE+RCFVGGLAWAT D +L AF+ YGD+++SKI NDRETGRSRGFGFVTF+DEK+M+DAIEG+NGQ+LDGR+ITVNEAQ Sbjct: 1 MASGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQ 85
BLAST of CX306417 vs. ExPASy Swiss-Prot
Match: GRP2_SINAL (Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.799e-33 Identity = 66/85 (77.65%), Postives = 78/85 (91.76%), Query Frame = 1 Query: 79 MASADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKITNDRETGRSRGFGFVTFRDEKSMRDAIEGVNGQNLDGRNITVNEAQ 333 MAS DVE+RCFVGGLAWAT + SL AFS +G++++SKI NDRETGRSRGFGFVTF+DEKSM+DAIEG+NGQ+LDGR+ITVNEAQ Sbjct: 1 MASPDVEYRCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQ 85
BLAST of CX306417 vs. ExPASy Swiss-Prot
Match: GRPA_MAIZE (Glycine-rich RNA-binding, abscisic acid-inducible protein OS=Zea mays GN=RAB15 PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 4.899e-31 Identity = 62/85 (72.94%), Postives = 74/85 (87.06%), Query Frame = 1 Query: 79 MASADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKITNDRETGRSRGFGFVTFRDEKSMRDAIEGVNGQNLDGRNITVNEAQ 333 MA+ADVE+RCFVGGLAWAT++ SL AF++YG+IL+SK+ DRETGRSRGFGFVTF E SM DAIE +NG+ LDGRNITVN+AQ Sbjct: 1 MAAADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQAQ 85
BLAST of CX306417 vs. ExPASy Swiss-Prot
Match: GRP_HORVU (Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare GN=blt801 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.862e-30 Identity = 61/82 (74.39%), Postives = 70/82 (85.37%), Query Frame = 1 Query: 88 ADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKITNDRETGRSRGFGFVTFRDEKSMRDAIEGVNGQNLDGRNITVNEAQ 333 ADVE+RCFVGGL WAT D SL AFS YGD+++SKI DRETGRSRGFGFVTF +++MR AIE +NGQ+LDGRNITVNEAQ Sbjct: 2 ADVEYRCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVNEAQ 83
BLAST of CX306417 vs. ExPASy Swiss-Prot
Match: GRP8_ARATH (Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana GN=GRP8 PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 7.074e-30 Identity = 59/82 (71.95%), Postives = 71/82 (86.59%), Query Frame = 1 Query: 88 ADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKITNDRETGRSRGFGFVTFRDEKSMRDAIEGVNGQNLDGRNITVNEAQ 333 ++VE+RCFVGGLAWAT D L FS +GD+++SKI NDRE+GRSRGFGFVTF+DEK+MRDAIE +NG+ LDGR ITVNEAQ Sbjct: 2 SEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQ 83
BLAST of CX306417 vs. ExPASy Swiss-Prot
Match: GRP10_BRANA (Glycine-rich RNA-binding protein 10 OS=Brassica napus GN=GRP10 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 9.239e-30 Identity = 58/82 (70.73%), Postives = 72/82 (87.80%), Query Frame = 1 Query: 88 ADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKITNDRETGRSRGFGFVTFRDEKSMRDAIEGVNGQNLDGRNITVNEAQ 333 ++VE+RCFVGGLAWAT D+ L FS +G++++SKI NDRETGRSRGFGFVTF+DEKSM+DAI+ +NG+ LDGR ITVNEAQ Sbjct: 2 SEVEYRCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMNGKELDGRTITVNEAQ 83
BLAST of CX306417 vs. ExPASy Swiss-Prot
Match: GRP2_SORBI (Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor GN=GRP2 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.576e-29 Identity = 58/85 (68.24%), Postives = 73/85 (85.88%), Query Frame = 1 Query: 79 MASADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKITNDRETGRSRGFGFVTFRDEKSMRDAIEGVNGQNLDGRNITVNEAQ 333 MA+ADVE+RCFVGGLAWAT + +L +AF+ +G +++SK+ DRETGRSRGFGFVTF E+SM DAIE +NG+ LDGRNITVN+AQ Sbjct: 1 MAAADVEYRCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMNGKELDGRNITVNQAQ 85
BLAST of CX306417 vs. ExPASy Swiss-Prot
Match: GRP1_SORBI (Glycine-rich RNA-binding protein 1 (Fragment) OS=Sorghum bicolor GN=GRP1 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 7.839e-21 Identity = 48/64 (75.00%), Postives = 55/64 (85.94%), Query Frame = 1 Query: 142 SSLHEAFSAYGDILESKITNDRETGRSRGFGFVTFRDEKSMRDAIEGVNGQNLDGRNITVNEAQ 333 +SLH AFS YG++LESKI DRET RSRGFGFVTF E++MR AIEG+NG+ LDGRNITVNEAQ Sbjct: 1 NSLHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVNEAQ 64 The following BLAST results are available for this feature:
BLAST of CX306417 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306417 ID=CX306417; Name=CX306417; organism=Citrus clementina; type=EST; length=505bpback to top |