CX308580
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBE2B_MOUSE (Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.717e-15 Identity = 37/78 (47.44%), Postives = 51/78 (65.38%), Query Frame = -2 Query: 58 LCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 291 L ++P G S G E+N+ +W+A I GP T +E G F ++ F + YP PPTVRF S+M+HPNVY DG +C+ IL Sbjct: 16 LQEDPPVGVS-GAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDIL 92
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBE2B_HUMAN (Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.717e-15 Identity = 37/78 (47.44%), Postives = 51/78 (65.38%), Query Frame = -2 Query: 58 LCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 291 L ++P G S G E+N+ +W+A I GP T +E G F ++ F + YP PPTVRF S+M+HPNVY DG +C+ IL Sbjct: 16 LQEDPPVGVS-GAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDIL 92
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBE2B_BOVIN (Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN=UBE2B PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.717e-15 Identity = 37/78 (47.44%), Postives = 51/78 (65.38%), Query Frame = -2 Query: 58 LCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 291 L ++P G S G E+N+ +W+A I GP T +E G F ++ F + YP PPTVRF S+M+HPNVY DG +C+ IL Sbjct: 16 LQEDPPVGVS-GAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDIL 92
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC3_ARATH (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.717e-15 Identity = 36/78 (46.15%), Postives = 50/78 (64.10%), Query Frame = -2 Query: 58 LCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 291 L K+P G S G ++N+ W+A I GP DT ++GG F + F ++YP PP VRF S M+HPN+Y DG +C+ IL Sbjct: 16 LQKDPPVGIS-GAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDIL 92
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC2_ARATH (Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.717e-15 Identity = 36/78 (46.15%), Postives = 51/78 (65.38%), Query Frame = -2 Query: 58 LCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 291 L ++P G S G ++N+ W+A I GP DT ++GG F + F ++YP PPTVRF S M+HPN+Y DG +C+ IL Sbjct: 16 LQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL 92
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC1_ARATH (Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.717e-15 Identity = 36/78 (46.15%), Postives = 51/78 (65.38%), Query Frame = -2 Query: 58 LCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 291 L ++P G S G ++N+ W+A I GP DT ++GG F + F ++YP PPTVRF S M+HPN+Y DG +C+ IL Sbjct: 16 LQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL 92
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.929e-15 Identity = 36/78 (46.15%), Postives = 51/78 (65.38%), Query Frame = -2 Query: 58 LCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 291 L ++P G S G ++N+ W+A I GP DT ++GG F + F ++YP PPTVRF S M+HPN+Y DG +C+ IL Sbjct: 16 LQQDPPAGIS-GAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL 92
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC2_MEDSA (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.929e-15 Identity = 35/75 (46.67%), Postives = 49/75 (65.33%), Query Frame = -2 Query: 58 NPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 282 +P G S G ++N+ W+A I GP DT ++GG F + F ++YP PPTVRF S M+HPN+Y DG +C+ IL Sbjct: 19 DPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL 92
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC2_NEUCR (Ubiquitin-conjugating enzyme E2 2 OS=Neurospora crassa GN=mus-8 PE=3 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 3.825e-15 Identity = 38/75 (50.67%), Postives = 50/75 (66.67%), Query Frame = -2 Query: 58 NPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 282 +P G SA V + NV W+A IIGP DT +E G F +M F + YP PP+V+F SEM+HPNVY G++C+ IL Sbjct: 19 DPPAGVSASPVPD-NVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPSVKFISEMFHPNVYATGELCLDIL 92
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC2_CRYNE (Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus neoformans GN=UBC2 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.825e-15 Identity = 33/68 (48.53%), Postives = 47/68 (69.12%), Query Frame = -2 Query: 58 AGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 261 +G + N+ W+A I GPP+T +E G F +TF D YP PPTVRF S+M+HPN+Y +G++C+ IL Sbjct: 25 SGSPNPDNIMVWNAVIFGPPETPFEDGSFRLTLTFTDAYPNKPPTVRFISKMFHPNIYANGELCLDIL 92 The following BLAST results are available for this feature:
BLAST of CX308580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308580 ID=CX308580; Name=CX308580; organism=Citrus clementina; type=EST; length=364bpback to top |