CX308580
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC14_ARATH (Ubiquitin-conjugating enzyme E2 14 OS=Arabidopsis thaliana GN=UBC14 PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 5.650e-51 Identity = 87/98 (88.78%), Postives = 93/98 (94.90%), Query Frame = -2 Query: 1 DLCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTP 294 DLCK PVDGFSAGLVDE NVF+WS SI+GPPDTLYEGGFFNAIM+FP+NYPVSPPTV FTSEMWHPNVY DGKVCISILHPPGDDP+GYELA+ERWTP Sbjct: 16 DLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYELASERWTP 113
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC7_ARATH (Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis thaliana GN=UBC7 PE=2 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 9.638e-51 Identity = 86/98 (87.76%), Postives = 93/98 (94.90%), Query Frame = -2 Query: 1 DLCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTP 294 DLCK+PVDGFSAGLVDE N+FEWS +IIGPPDTLYEGGFFNAIMTFP NYP SPPTVRFTS+MWHPNVY DG+VCISILHPPGDDP+GYELA+ERWTP Sbjct: 15 DLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYELASERWTP 112
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC13_ARATH (Ubiquitin-conjugating enzyme E2 13 OS=Arabidopsis thaliana GN=UBC13 PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 8.159e-50 Identity = 84/98 (85.71%), Postives = 93/98 (94.90%), Query Frame = -2 Query: 1 DLCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTP 294 DLCK+PVDGFSAGLVDE N+FEWS +IIGPPDTLYEGGFF AIM+FP NYP SPPTVRFTS++WHPNVYPDG+VCISILHPPGDDP+GYELA+ERWTP Sbjct: 15 DLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWTP 112
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC7_WHEAT (Ubiquitin-conjugating enzyme E2 7 OS=Triticum aestivum GN=UBC7 PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 9.660e-43 Identity = 75/93 (80.65%), Postives = 83/93 (89.25%), Query Frame = -2 Query: 1 PVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTP 279 P GF G VD+SNVFEW +IIGPP+TLY+GG+FNAIM+FP NYP SPPTVRFTSEMWHPNVYPDG+VCISI HPPGDDPNGYELA+ERWTP Sbjct: 23 PSMGFQLGFVDDSNVFEWQVTIIGPPETLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVCISI-HPPGDDPNGYELASERWTP 114
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC15_SCHPO (Ubiquitin-conjugating enzyme E2 15 OS=Schizosaccharomyces pombe GN=ubc15 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.034e-36 Identity = 63/98 (64.29%), Postives = 80/98 (81.63%), Query Frame = -2 Query: 1 DLCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTP 294 ++ KNP GFS GLVD+ ++FEW IIGP DTLYEGGFF+A ++FP +YP+ PP ++FT+E+WHPNV+P+G+VCISILHPPGDD GYE A ERW P Sbjct: 16 EIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLP 113
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC7_CAEEL (Probable ubiquitin-conjugating enzyme E2 7 OS=Caenorhabditis elegans GN=ubc-7 PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 4.805e-34 Identity = 60/98 (61.22%), Postives = 76/98 (77.55%), Query Frame = -2 Query: 1 DLCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTP 294 D+ + PVDGFSAGLVD++++++W +IGPPDTLYEGGFF AI+ FP +YP PP ++F SE+WHPN+ +G VCISILH PGDD GYE ERW P Sbjct: 14 DMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLP 111
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UB2G1_RAT (Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norvegicus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 139.813 bits (351), Expect = 4.068e-33 Identity = 59/98 (60.20%), Postives = 76/98 (77.55%), Query Frame = -2 Query: 1 DLCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTP 294 +L KNPV+GFSAGL+D+++++ W IIGPPDTLYEGG F A +TFP +YP+ PP ++F +E+WHPNV +G VCISILH PG+D GYE ERW P Sbjct: 16 ELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLP 113
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UB2G1_MOUSE (Ubiquitin-conjugating enzyme E2 G1 OS=Mus musculus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 139.813 bits (351), Expect = 4.068e-33 Identity = 59/98 (60.20%), Postives = 76/98 (77.55%), Query Frame = -2 Query: 1 DLCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTP 294 +L KNPV+GFSAGL+D+++++ W IIGPPDTLYEGG F A +TFP +YP+ PP ++F +E+WHPNV +G VCISILH PG+D GYE ERW P Sbjct: 16 ELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLP 113
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UB2G1_HUMAN (Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens GN=UBE2G1 PE=1 SV=3) HSP 1 Score: 139.813 bits (351), Expect = 4.068e-33 Identity = 59/98 (60.20%), Postives = 76/98 (77.55%), Query Frame = -2 Query: 1 DLCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTP 294 +L KNPV+GFSAGL+D+++++ W IIGPPDTLYEGG F A +TFP +YP+ PP ++F +E+WHPNV +G VCISILH PG+D GYE ERW P Sbjct: 16 ELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLP 113
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UB2G2_PONAB (Ubiquitin-conjugating enzyme E2 G2 OS=Pongo abelii GN=UBE2G2 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.546e-32 Identity = 60/97 (61.86%), Postives = 75/97 (77.32%), Query Frame = -2 Query: 1 LCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTP 291 L NP +G AG ++E N FEW A I+GP DT +E G F AI++FP +YP+SPP +RFT EM+HPN+YPDG+VCISILH PGDDP GYE + ERW+P Sbjct: 16 LTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSP 112 The following BLAST results are available for this feature:
BLAST of CX308580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129 ZOOMx 1POSITION0
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308580 ID=CX308580; Name=CX308580; organism=Citrus clementina; type=EST; length=364bpback to top |