CX308580
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC7_SCHPO (Ubiquitin-conjugating enzyme E2-18 kDa OS=Schizosaccharomyces pombe GN=ubc3 PE=2 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 3.336e-27 Identity = 52/98 (53.06%), Postives = 68/98 (69.39%), Query Frame = -2 Query: 1 DLCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTP 294 +L +N DG +AG +E + F W I GP T +EGG + A + FP +YP+ PPT++F E +HPNVY DG VCISILH PGDDPN YE ++ERW+P Sbjct: 16 ELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKFPSDYPLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSP 113
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC_ASFB7 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (strain Badajoz 1971 Vero-adapted) GN=UBC PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 5.888e-24 Identity = 49/97 (50.52%), Postives = 63/97 (64.95%), Query Frame = -2 Query: 1 LCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTP 291 L +NP + F V+E+N+ EW + GPPDTLYEGG F A + FP YP +PP + FTSEMWHPN+YPDG++CISILH + G W+P Sbjct: 13 LIENPSENFKIS-VNENNITEWDVILRGPPDTLYEGGLFKAKVAFPPEYPYAPPKLTFTSEMWHPNIYPDGRLCISILHGDNAEEQGM-----TWSP 103
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC_ASFWA (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Warthog/Namibia/Wart80/1980) GN=UBC PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.713e-23 Identity = 49/97 (50.52%), Postives = 63/97 (64.95%), Query Frame = -2 Query: 1 LCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTP 291 L +NP + F V+E+++ EW + GPPDTLYEGG F A + FP YP +PP + FTSEMWHPN+YPDGK+CISILH + G W+P Sbjct: 13 LIENPSENFKIS-VNENDMTEWDVILRGPPDTLYEGGLFKAKVAFPPEYPYAPPRLTFTSEMWHPNIYPDGKLCISILHGDNAEEQGM-----TWSP 103
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC_ASFK5 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Pig/Kenya/KEN-50/1950) GN=UBC PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.713e-23 Identity = 49/98 (50.00%), Postives = 63/98 (64.29%), Query Frame = -2 Query: 1 DLCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTP 294 +L +NP + F V+E+N+ EW + GP DT YEGG F A +TFP NYP PP + FTSEMWHPN+YPDG++CISILH + G W+P Sbjct: 12 NLTENPSEHFKVS-VNENNLTEWDVILKGPSDTFYEGGLFKAKITFPPNYPYEPPKLTFTSEMWHPNIYPDGRLCISILHTDNVEERGM-----TWSP 103
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC_ASFP4 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) GN=UBC PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.110e-22 Identity = 49/97 (50.52%), Postives = 61/97 (62.89%), Query Frame = -2 Query: 1 LCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTP 291 L +NP + F V+E+N+ EW + GP DTLYEGG F A + FP NYP PP + FTSEMWHPN+Y DG+VCISILH + G W+P Sbjct: 13 LTENPSENFKVS-VNENNMTEWDVILKGPADTLYEGGLFKAKIGFPPNYPYEPPRLTFTSEMWHPNIYSDGRVCISILHGDNAEEQGM-----TWSP 103
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC_ASFM2 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Tick/Malawi/Lil 20-1/1983) GN=UBC PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.894e-22 Identity = 49/98 (50.00%), Postives = 60/98 (61.22%), Query Frame = -2 Query: 1 DLCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTP 294 +L NP + F V+E N+ EW + GPPDTLYEGG F A + FP YP PP + FTSEMWHPN+Y DGK+CISILH + G W+P Sbjct: 12 NLIVNPSEHFKIS-VNEDNLTEWDVILKGPPDTLYEGGLFKAKIVFPPKYPYEPPRLTFTSEMWHPNIYSDGKLCISILHGDNAEEQGM-----TWSP 103
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC3_YEAST (Ubiquitin-conjugating enzyme E2-34 kDa OS=Saccharomyces cerevisiae GN=CDC34 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.798e-20 Identity = 45/96 (46.88%), Postives = 61/96 (63.54%), Query Frame = -2 Query: 1 KNPVDGFSAGLVDESNVFEWSASI-IGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTP 285 K + F L D+SN+F W+ + + D++Y GGFF A M FP+++P SPP RFT ++HPNVY DG++CISILH G DP E E W+P Sbjct: 23 KKAIPSFHIELEDDSNIFTWNIGVMVLNEDSIYHGGFFKAQMRFPEDFPFSPPQFRFTPAIYHPNVYRDGRLCISILHQSG-DPMTDEPDAETWSP 117
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC11_SCHPO (Ubiquitin-conjugating enzyme E2-20 kDa OS=Schizosaccharomyces pombe GN=ubc11 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.028e-16 Identity = 38/71 (53.52%), Postives = 46/71 (64.79%), Query Frame = -2 Query: 58 GFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 270 G SA +SN+ W+ +I GP DT YEG F M+FP NYP SPPT+ FTS MWHPNV G +C+ IL Sbjct: 47 GISAFPDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDIL 117
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBE2B_RAT (Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.717e-15 Identity = 37/78 (47.44%), Postives = 51/78 (65.38%), Query Frame = -2 Query: 58 LCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 291 L ++P G S G E+N+ +W+A I GP T +E G F ++ F + YP PPTVRF S+M+HPNVY DG +C+ IL Sbjct: 16 LQEDPPVGVS-GAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDIL 92
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBE2B_RABIT (Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.717e-15 Identity = 37/78 (47.44%), Postives = 51/78 (65.38%), Query Frame = -2 Query: 58 LCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 291 L ++P G S G E+N+ +W+A I GP T +E G F ++ F + YP PPTVRF S+M+HPNVY DG +C+ IL Sbjct: 16 LQEDPPVGVS-GAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDIL 92 The following BLAST results are available for this feature:
BLAST of CX308580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308580 ID=CX308580; Name=CX308580; organism=Citrus clementina; type=EST; length=364bpback to top |