CX308697
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308697 vs. ExPASy Swiss-Prot
Match: RL44_GOSHI (60S ribosomal protein L44 OS=Gossypium hirsutum GN=RPL44 PE=3 SV=3) HSP 1 Score: 117.087 bits (292), Expect = 2.813e-26 Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = -3 Query: 205 GQTEPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 366 GQT+PVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF Sbjct: 52 GQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 105
BLAST of CX308697 vs. ExPASy Swiss-Prot
Match: RL36A_ARATH (60S ribosomal protein L36a OS=Arabidopsis thaliana GN=RPL36AA PE=2 SV=3) HSP 1 Score: 109.768 bits (273), Expect = 4.491e-24 Identity = 50/54 (92.59%), Postives = 51/54 (94.44%), Query Frame = -3 Query: 205 GQTEPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 366 GQT+PVFHKKAKTTKKIVLRLQCQ CKH SQ PIKRCKHFEIGGDKKGKGTSLF Sbjct: 52 GQTKPVFHKKAKTTKKIVLRLQCQSCKHFSQRPIKRCKHFEIGGDKKGKGTSLF 105
BLAST of CX308697 vs. ExPASy Swiss-Prot
Match: RL44_PHARH (60S ribosomal protein L44 OS=Phaffia rhodozyma GN=RPL44 PE=3 SV=3) HSP 1 Score: 85.8853 bits (211), Expect = 6.945e-17 Identity = 37/53 (69.81%), Postives = 45/53 (84.91%), Query Frame = -3 Query: 208 GQTEPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSL 366 GQT+PVFHKKAKTTKK+VLRL+C CK+ Q +KRCKHFE+GGDKK KG ++ Sbjct: 52 GQTKPVFHKKAKTTKKVVLRLECSVCKYKMQMTLKRCKHFELGGDKKTKGAAI 104
BLAST of CX308697 vs. ExPASy Swiss-Prot
Match: RL44_CANGY (60S ribosomal protein L44 OS=Candida glycerinogenes GN=RPL44 PE=3 SV=3) HSP 1 Score: 84.7297 bits (208), Expect = 1.547e-16 Identity = 38/53 (71.70%), Postives = 44/53 (83.02%), Query Frame = -3 Query: 208 GQTEPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSL 366 GQT+PVFHKKAKTTKK+VLRL+C CK Q +KRCKHFE+GGDKK KG +L Sbjct: 52 GQTKPVFHKKAKTTKKVVLRLECVACKTKLQLSLKRCKHFELGGDKKQKGAAL 104
BLAST of CX308697 vs. ExPASy Swiss-Prot
Match: RL44_PICJA (60S ribosomal protein L44 OS=Pichia jadinii GN=RPL44 PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 2.021e-16 Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = -3 Query: 208 GQTEPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSL 366 GQT+PVFHKKAKTTKK+VLRL+C CK +Q +KRCKHFE+GGDKK KG +L Sbjct: 52 GQTKPVFHKKAKTTKKVVLRLECVVCKTKAQLALKRCKHFELGGDKKQKGQAL 104
BLAST of CX308697 vs. ExPASy Swiss-Prot
Match: RL44_PICGU (60S ribosomal protein L44 OS=Pichia guilliermondii GN=RPL44 PE=3 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 2.021e-16 Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = -3 Query: 208 GQTEPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSL 366 GQT+PVFHKKAKTTKK+VLRL+C CK +Q +KRCKHFE+GGDKK KG +L Sbjct: 52 GQTKPVFHKKAKTTKKVVLRLECVVCKTKAQLSLKRCKHFELGGDKKQKGQAL 104
BLAST of CX308697 vs. ExPASy Swiss-Prot
Match: RL44_DEBHA (60S ribosomal protein L44 OS=Debaryomyces hansenii GN=RPL44 PE=3 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 2.021e-16 Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = -3 Query: 208 GQTEPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSL 366 GQT+PVFHKKAKTTKK+VLRL+C CK +Q +KRCKHFE+GGDKK KG +L Sbjct: 52 GQTKPVFHKKAKTTKKVVLRLECVVCKTKAQLSLKRCKHFELGGDKKQKGQAL 104
BLAST of CX308697 vs. ExPASy Swiss-Prot
Match: RL44_COPCI (60S ribosomal protein L44 OS=Coprinopsis cinerea GN=RPL44 PE=3 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 2.021e-16 Identity = 37/53 (69.81%), Postives = 45/53 (84.91%), Query Frame = -3 Query: 208 GQTEPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSL 366 GQT+PVFHKKAKTTKK+VLRL+C CK+ Q +KRCKHFE+GG+KK KG +L Sbjct: 52 GQTKPVFHKKAKTTKKVVLRLECTVCKYKMQVSLKRCKHFELGGEKKTKGAAL 104
BLAST of CX308697 vs. ExPASy Swiss-Prot
Match: RL44_COPC7 (60S ribosomal protein L44 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=RPL44 PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 2.021e-16 Identity = 37/53 (69.81%), Postives = 45/53 (84.91%), Query Frame = -3 Query: 208 GQTEPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSL 366 GQT+PVFHKKAKTTKK+VLRL+C CK+ Q +KRCKHFE+GG+KK KG +L Sbjct: 52 GQTKPVFHKKAKTTKKVVLRLECTVCKYKMQVSLKRCKHFELGGEKKTKGAAL 104
BLAST of CX308697 vs. ExPASy Swiss-Prot
Match: RL44_CAEEL (60S ribosomal protein L44 OS=Caenorhabditis elegans GN=rpl-41 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 2.021e-16 Identity = 36/50 (72.00%), Postives = 42/50 (84.00%), Query Frame = -3 Query: 217 GQTEPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 366 GQT+P+F KKAKTTKKIVLR++C CKH Q PIKRCKHFE+GG KK +G Sbjct: 51 GQTKPIFRKKAKTTKKIVLRMECTECKHKKQLPIKRCKHFELGGQKKSRG 100 The following BLAST results are available for this feature:
BLAST of CX308697 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308697 ID=CX308697; Name=CX308697; organism=Citrus clementina; type=EST; length=368bpback to top |