CX308749
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308749 vs. ExPASy Swiss-Prot
Match: WRK18_ARATH (WRKY transcription factor 18 OS=Arabidopsis thaliana GN=WRKY18 PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 2.008e-16 Identity = 45/69 (65.22%), Postives = 50/69 (72.46%), Query Frame = -3 Query: 28 QKVTKDNPSPRAYFRCSMASSGCPVKKKVQRCMEDKSFLVATYEGEHNH------DVQCSSLGQSSSLT 216 QKVT+DNPSPRAYFRCS A S CPVKKKVQR ED S LVATYEG HNH + +S G SS++T Sbjct: 186 QKVTRDNPSPRAYFRCSFAPS-CPVKKKVQRSAEDPSLLVATYEGTHNHLGPNASEGDATSQGGSSTVT 253
BLAST of CX308749 vs. ExPASy Swiss-Prot
Match: WRKY6_ARATH (WRKY transcription factor 6 OS=Arabidopsis thaliana GN=WRKY6 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.301e-15 Identity = 35/63 (55.56%), Postives = 49/63 (77.78%), Query Frame = -3 Query: 28 QKVTKDNPSPRAYFRCSMASSGCPVKKKVQRCMEDKSFLVATYEGEHNHDVQCSSLGQSSSLT 216 QK+ K NP PRAY+RC+MA+ GCPV+K+VQRC ED+S L+ TYEG HNH + +++ +S+ T Sbjct: 322 QKMAKGNPCPRAYYRCTMAT-GCPVRKQVQRCAEDRSILITTYEGNHNHPLPPAAVAMASTTT 383
BLAST of CX308749 vs. ExPASy Swiss-Prot
Match: WRK40_ARATH (Probable WRKY transcription factor 40 OS=Arabidopsis thaliana GN=WRKY40 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.301e-15 Identity = 41/67 (61.19%), Postives = 51/67 (76.12%), Query Frame = -3 Query: 16 QKVTKDNPSPRAYFRCSMASSGCPVKKKVQRCMEDKSFLVATYEGEHNHDVQCSSLGQSSSLTNYCS 216 QKVT+DNPSPRAYF+C+ A S C VKKKVQR +ED+S LVATYEGEHNH + S + ++ L + S Sbjct: 156 QKVTRDNPSPRAYFKCACAPS-CSVKKKVQRSVEDQSVLVATYEGEHNHPMP-SQIDSNNGLNRHIS 220
BLAST of CX308749 vs. ExPASy Swiss-Prot
Match: WRK60_ARATH (Probable WRKY transcription factor 60 OS=Arabidopsis thaliana GN=WRKY60 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.899e-15 Identity = 40/62 (64.52%), Postives = 47/62 (75.81%), Query Frame = -3 Query: 31 QKVTKDNPSPRAYFRCSMASSGCPVKKKVQRCMEDKSFLVATYEGEHNHDVQCSSLGQSSSL 216 QK+T+DNPSPRAYFRCS + S C VKKKVQR ED SFLVATYEG HNH +S+ ++ L Sbjct: 156 QKITRDNPSPRAYFRCSFSPS-CLVKKKVQRSAEDPSFLVATYEGTHNHTGPHASVSRTVKL 216
BLAST of CX308749 vs. ExPASy Swiss-Prot
Match: WRK31_ARATH (Probable WRKY transcription factor 31 OS=Arabidopsis thaliana GN=WRKY31 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.899e-15 Identity = 35/63 (55.56%), Postives = 47/63 (74.60%), Query Frame = -3 Query: 28 QKVTKDNPSPRAYFRCSMASSGCPVKKKVQRCMEDKSFLVATYEGEHNHDVQCSSLGQSSSLT 216 QK+ K NP PRAY+RC+MA GCPV+K+VQRC ED+S L+ TYEG HNH + ++ +S+ T Sbjct: 307 QKMAKGNPCPRAYYRCTMAG-GCPVRKQVQRCAEDRSILITTYEGNHNHPLPPAATAMASTTT 368
BLAST of CX308749 vs. ExPASy Swiss-Prot
Match: WRK42_ARATH (Probable WRKY transcription factor 42 OS=Arabidopsis thaliana GN=WRKY42 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.946e-15 Identity = 34/63 (53.97%), Postives = 48/63 (76.19%), Query Frame = -3 Query: 28 QKVTKDNPSPRAYFRCSMASSGCPVKKKVQRCMEDKSFLVATYEGEHNHDVQCSSLGQSSSLT 216 QK+ K NP PRAY+RC+MA GCPV+K+VQRC ED++ L+ TYEG HNH + +++ +S+ T Sbjct: 302 QKMAKGNPCPRAYYRCTMAV-GCPVRKQVQRCAEDRTILITTYEGNHNHPLPPAAMNMASTTT 363
BLAST of CX308749 vs. ExPASy Swiss-Prot
Match: WRK61_ARATH (Probable WRKY transcription factor 61 OS=Arabidopsis thaliana GN=WRKY61 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.102e-14 Identity = 34/61 (55.74%), Postives = 47/61 (77.05%), Query Frame = -3 Query: 34 QKVTKDNPSPRAYFRCSMASSGCPVKKKVQRCMEDKSFLVATYEGEHNHDVQCSSLGQSSS 216 QK+ K NP PRAY+RC++A+S CPV+K+VQRC ED S L++TYEG HNH + S+ +S+ Sbjct: 201 QKIAKGNPCPRAYYRCTIAAS-CPVRKQVQRCSEDMSILISTYEGTHNHPLPMSATAMASA 260
BLAST of CX308749 vs. ExPASy Swiss-Prot
Match: WRKY9_ARATH (Probable WRKY transcription factor 9 OS=Arabidopsis thaliana GN=WRKY9 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.187e-14 Identity = 33/61 (54.10%), Postives = 44/61 (72.13%), Query Frame = -3 Query: 34 QKVTKDNPSPRAYFRCSMASSGCPVKKKVQRCMEDKSFLVATYEGEHNHDVQCSSLGQSSS 216 QK K NP PRAY+RC++A GCPV+K+VQRC+ED S L+ TYEG HNH + + +S+ Sbjct: 245 QKTAKGNPCPRAYYRCTVAP-GCPVRKQVQRCLEDMSILITTYEGTHNHPLPVGATAMAST 304
BLAST of CX308749 vs. ExPASy Swiss-Prot
Match: WRK72_ARATH (Probable WRKY transcription factor 72 OS=Arabidopsis thaliana GN=WRKY72 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.591e-13 Identity = 32/61 (52.46%), Postives = 45/61 (73.77%), Query Frame = -3 Query: 34 QKVTKDNPSPRAYFRCSMASSGCPVKKKVQRCMEDKSFLVATYEGEHNHDVQCSSLGQSSS 216 QK+ K NP PRAY+RC++A GCPV+K+VQRC +D S L+ TYEG H+H + S+ +S+ Sbjct: 237 QKIAKGNPCPRAYYRCTVAP-GCPVRKQVQRCADDMSILITTYEGTHSHSLPLSATTMAST 296
BLAST of CX308749 vs. ExPASy Swiss-Prot
Match: WRK47_ARATH (Probable WRKY transcription factor 47 OS=Arabidopsis thaliana GN=WRKY47 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 1.591e-13 Identity = 33/61 (54.10%), Postives = 44/61 (72.13%), Query Frame = -3 Query: 34 QKVTKDNPSPRAYFRCSMASSGCPVKKKVQRCMEDKSFLVATYEGEHNHDVQCSSLGQSSS 216 QK+ K NP PRAY+RC+MA GCPV+K+VQRC ED + L TYEG HNH + S+ +++ Sbjct: 249 QKMAKGNPCPRAYYRCTMAV-GCPVRKQVQRCAEDTTILTTTYEGNHNHPLPPSATAMAAT 308 The following BLAST results are available for this feature:
BLAST of CX308749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308749 ID=CX308749; Name=CX308749; organism=Citrus clementina; type=EST; length=218bpback to top |