DY258332
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258332 vs. ExPASy Swiss-Prot
Match: RL4A_SCHPO (60S ribosomal protein L4-A OS=Schizosaccharomyces pombe GN=rpl4a PE=1 SV=2) HSP 1 Score: 210.69 bits (535), Expect = 2.311e-65 Identity = 99/164 (60.37%), Postives = 123/164 (75.00%), Query Frame = 1 Query: 79 ARPVIIIISVEGDMVTDASSTVPLPDVMKASIRPDIVGFVHSNISQNSPQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFTPTKIWRRWHRKINDNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKT 570 ARP + I S +G + +S T+ LP V KA IRPD+V VH+ +++N QPYAVS KAGHQTSAESWGTGRA++RIPRV GGGTHR+GQ AFGNMCR GRMF PTK WR+WH K+N N+KRY PSL++ARGH+IE +PE+PLVV D+ +S +KT Sbjct: 4 ARPTVSIYSKDGSV---SSETIALPFVFKAPIRPDLVRSVHTAVAKNKRQPYAVSEKAGHQTSAESWGTGRALARIPRVGGGGTHRSGQAAFGNMCRSGRMFAPTKTWRKWHVKVNQNEKRYAISSAVAASGVPSLLLARGHRIEEIPEVPLVVDDAVQSFQKT 164 HSP 2 Score: 61.2326 bits (147), Expect = 2.311e-65 Identity = 33/89 (37.08%), Postives = 55/89 (61.80%), Query Frame = 3 Query: 588 VLKQIGAYADAQKAKDSQGIRPGKAKMKNTLYISSQDPLDVYSPEGAKLCQGFKNLPRVKGVKVEKIDWLKLAPGAPPEGVIA*TKPAF 854 +LK+I AY D K +S+ +R GK K++N ++ + PL V++ E A + + F+N+P V+ V V +++ L+LAPG + TK AF Sbjct: 170 LLKEIKAYRDVVKVANSRKLRAGKGKLRNRRHVQRRGPLVVFN-EDAGIVKAFRNIPGVEIVNVRRLNLLQLAPGGHLGRFVIWTKSAF 257
BLAST of DY258332 vs. ExPASy Swiss-Prot
Match: RL4_PONAB (60S ribosomal protein L4 OS=Pongo abelii GN=RPL4 PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 3.924e-65 Identity = 104/164 (63.41%), Postives = 123/164 (75.00%), Query Frame = 1 Query: 79 ARPVIIIISVEGDMVTDASSTVPLPDVMKASIRPDIVGFVHSNISQNSPQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFTPTKIWRRWHRKINDNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKT 570 ARP+I + S +G+ + V LP V KA IRPDIV FVH+N+ +N+ QPYAVS AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMF PTK WRRWHR++N QKRY P+LVM++GH+IE VPE+PLVV D E +KT Sbjct: 4 ARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKT 164 HSP 2 Score: 52.7582 bits (125), Expect = 3.924e-65 Identity = 31/92 (33.70%), Postives = 50/92 (54.35%), Query Frame = 3 Query: 588 VLKQIGAYADAQKAKDSQGIRPGKAKMKNTLYISSQDPLDVYSPEGAKLCQGFKNLPRVKGVKVEKIDWLKLAPGAPPEGVIA*TKPAFENL 863 +LK++ A D +K SQ +R GK KM+N I + P +Y+ + + + F+N+P + + V K++ LKLAPG T+ AF L Sbjct: 170 LLKKLKARNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG-IIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKL 260
BLAST of DY258332 vs. ExPASy Swiss-Prot
Match: RL4_CANFA (60S ribosomal protein L4 OS=Canis familiaris GN=RPL4 PE=1 SV=2) HSP 1 Score: 218.394 bits (555), Expect = 2.516e-64 Identity = 104/164 (63.41%), Postives = 123/164 (75.00%), Query Frame = 1 Query: 79 ARPVIIIISVEGDMVTDASSTVPLPDVMKASIRPDIVGFVHSNISQNSPQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFTPTKIWRRWHRKINDNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKT 570 ARP+I + S +G+ + V LP V KA IRPDIV FVH+N+ +N+ QPYAVS AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMF PTK WRRWHR++N QKRY P+LVM++GH+IE VPE+PLVV D E +KT Sbjct: 4 ARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALACLSLPALVMSKGHRIEEVPELPLVVEDKVEGYKKT 164 HSP 2 Score: 50.0618 bits (118), Expect = 2.516e-64 Identity = 30/92 (32.61%), Postives = 49/92 (53.26%), Query Frame = 3 Query: 588 VLKQIGAYADAQKAKDSQGIRPGKAKMKNTLYISSQDPLDVYSPEGAKLCQGFKNLPRVKGVKVEKIDWLKLAPGAPPEGVIA*TKPAFENL 863 +LK++ A+ D +K SQ +R GK KM+N I + P +Y+ + + + F+ P + + V K++ LKLAPG T+ AF L Sbjct: 170 LLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG-IIKAFRKHPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKL 260
BLAST of DY258332 vs. ExPASy Swiss-Prot
Match: RL4_URECA (60S ribosomal protein L4 OS=Urechis caupo GN=RPL4 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 2.518e-64 Identity = 102/164 (62.20%), Postives = 123/164 (75.00%), Query Frame = 1 Query: 79 ARPVIIIISVEGDMVTDASSTVPLPDVMKASIRPDIVGFVHSNISQNSPQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFTPTKIWRRWHRKINDNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKT 570 ARP +I+V D + S V LP V +A IRPDIV FVH + +N QPYAVS+KAGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRG RMF PTK WRRWHR++N Q+R+ P++VM++GH IE +PE+PLVVSDS ES++KT Sbjct: 3 ARP---LITVHSDKGAASESNVTLPAVFRAPIRPDIVNFVHFELKKNGRQPYAVSQKAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGRRMFAPTKTWRRWHRRVNTTQRRHALVSAIAATGIPAVVMSKGHCIEQIPEVPLVVSDSVESIKKT 163 HSP 2 Score: 55.8398 bits (133), Expect = 2.518e-64 Identity = 29/92 (31.52%), Postives = 52/92 (56.52%), Query Frame = 3 Query: 588 VLKQIGAYADAQKAKDSQGIRPGKAKMKNTLYISSQDPLDVYSPEGAKLCQGFKNLPRVKGVKVEKIDWLKLAPGAPPEGVIA*TKPAFENL 863 VL+++ A+ D +K K+S+ R GK K++N I + PL +Y + + + F+N+P + V V +++ L +APG T+ AF+ L Sbjct: 169 VLRRLKAWPDVEKVKNSRRFRAGKGKLRNRRAIQRRGPLIIYGTDNG-ISRAFRNIPGITLVNVNRLNLLSMAPGGHVGRFCIWTESAFKQL 259
BLAST of DY258332 vs. ExPASy Swiss-Prot
Match: RL4B_SCHPO (60S ribosomal protein L4-B OS=Schizosaccharomyces pombe GN=rpl4b PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 3.285e-64 Identity = 98/164 (59.76%), Postives = 123/164 (75.00%), Query Frame = 1 Query: 79 ARPVIIIISVEGDMVTDASSTVPLPDVMKASIRPDIVGFVHSNISQNSPQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFTPTKIWRRWHRKINDNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKT 570 ARP + I + +G + +S T+ LP V KA IRPD+V VH+ +++N QPYAVS KAGHQTSAESWGTGRA++RIPRV GGGTHR+GQ AFGNMCR GRMF PTK WR+WH K+N N+KRY PSL++ARGH+IE +PE+PLVV D+ +S +KT Sbjct: 4 ARPTVSIYNKDGSV---SSETLALPFVFKAPIRPDLVRSVHTAVAKNKRQPYAVSEKAGHQTSAESWGTGRALARIPRVGGGGTHRSGQAAFGNMCRSGRMFAPTKTWRKWHVKVNQNEKRYAIASAVAASGVPSLLLARGHRIEEIPEVPLVVDDAVQSFQKT 164 HSP 2 Score: 59.3066 bits (142), Expect = 3.285e-64 Identity = 32/89 (35.96%), Postives = 54/89 (60.67%), Query Frame = 3 Query: 588 VLKQIGAYADAQKAKDSQGIRPGKAKMKNTLYISSQDPLDVYSPEGAKLCQGFKNLPRVKGVKVEKIDWLKLAPGAPPEGVIA*TKPAF 854 +LK+I AY D K +S+ +R GK K++N ++ + PL V++ E + + F+N+P V+ V V +++ L+LAPG + TK AF Sbjct: 170 LLKEIKAYRDVIKVANSRKLRAGKGKLRNRRHVQRRGPLVVFN-EDTGIVKAFRNIPGVEIVNVRRLNLLQLAPGGHLGRFVIWTKSAF 257
BLAST of DY258332 vs. ExPASy Swiss-Prot
Match: RL4B_YEAST (60S ribosomal protein L4-B OS=Saccharomyces cerevisiae GN=RPL4B PE=1 SV=2) HSP 1 Score: 200.29 bits (508), Expect = 7.865e-60 Identity = 96/165 (58.18%), Postives = 122/165 (73.94%), Query Frame = 1 Query: 76 LARPVIIIISVEGDMVTDASSTVPLPDVMKASIRPDIVGFVHSNISQNSPQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFTPTKIWRRWHRKINDNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKT 570 ++RP + + S+ G+ +A +PLP V A IRPDIV V +++++N Q YAVS KAGHQTSAESWGTGRAV+RIPRV GGGT R+GQGAFGNMCRGGRMF PTK WR+W+ K+N N+KRY SLV+ARGH++E +PE+PLVVS ES++KT Sbjct: 1 MSRPQVTVHSLTGEATANA---LPLPAVFSAPIRPDIVHTVFTSVNKNKRQAYAVSEKAGHQTSAESWGTGRAVARIPRVGGGGTGRSGQGAFGNMCRGGRMFAPTKTWRKWNVKVNHNEKRYATASAIAATAVASLVLARGHRVEKIPEIPLVVSTDLESIQKT 162 HSP 2 Score: 53.1434 bits (126), Expect = 7.865e-60 Identity = 30/91 (32.97%), Postives = 50/91 (54.95%), Query Frame = 3 Query: 591 LKQIGAYADAQKAKDSQGIRPGKAKMKNTLYISSQDPLDVYSPEGAKLCQGFKNLPRVKGVKVEKIDWLKLAPGAPPEGVIA*TKPAFENL 863 LK +GA++D K S+ +R GK K +N + + PL VY+ + + + +N+P V+ V ++ L+LAPGA + T+ AF L Sbjct: 169 LKAVGAHSDLLKVLKSKKLRAGKGKYRNRRWTQRRGPLVVYAEDNG-IVKALRNVPGVETANVASLNLLQLAPGAHLGRFVIWTEAAFTKL 258
BLAST of DY258332 vs. ExPASy Swiss-Prot
Match: RL4A_YEAST (60S ribosomal protein L4-A OS=Saccharomyces cerevisiae GN=RPL4A PE=1 SV=4) HSP 1 Score: 200.29 bits (508), Expect = 7.865e-60 Identity = 96/165 (58.18%), Postives = 122/165 (73.94%), Query Frame = 1 Query: 76 LARPVIIIISVEGDMVTDASSTVPLPDVMKASIRPDIVGFVHSNISQNSPQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFTPTKIWRRWHRKINDNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKT 570 ++RP + + S+ G+ +A +PLP V A IRPDIV V +++++N Q YAVS KAGHQTSAESWGTGRAV+RIPRV GGGT R+GQGAFGNMCRGGRMF PTK WR+W+ K+N N+KRY SLV+ARGH++E +PE+PLVVS ES++KT Sbjct: 1 MSRPQVTVHSLTGEATANA---LPLPAVFSAPIRPDIVHTVFTSVNKNKRQAYAVSEKAGHQTSAESWGTGRAVARIPRVGGGGTGRSGQGAFGNMCRGGRMFAPTKTWRKWNVKVNHNEKRYATASAIAATAVASLVLARGHRVEKIPEIPLVVSTDLESIQKT 162 HSP 2 Score: 53.1434 bits (126), Expect = 7.865e-60 Identity = 30/91 (32.97%), Postives = 50/91 (54.95%), Query Frame = 3 Query: 591 LKQIGAYADAQKAKDSQGIRPGKAKMKNTLYISSQDPLDVYSPEGAKLCQGFKNLPRVKGVKVEKIDWLKLAPGAPPEGVIA*TKPAFENL 863 LK +GA++D K S+ +R GK K +N + + PL VY+ + + + +N+P V+ V ++ L+LAPGA + T+ AF L Sbjct: 169 LKAVGAHSDLLKVLKSKKLRAGKGKYRNRRWTQRRGPLVVYAEDNG-IVKALRNVPGVETANVASLNLLQLAPGAHLGRFVIWTEAAFTKL 258
BLAST of DY258332 vs. ExPASy Swiss-Prot
Match: RL4_DROME (60S ribosomal protein L4 OS=Drosophila melanogaster GN=RpL4 PE=2 SV=2) HSP 1 Score: 195.282 bits (495), Expect = 5.032e-59 Identity = 95/164 (57.93%), Postives = 118/164 (71.95%), Query Frame = 1 Query: 79 ARPVIIIISVEGDMVTDASSTVPLPDVMKASIRPDIVGFVHSNISQNSPQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFTPTKIWRRWHRKINDNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKT 570 ARP++ + + + + D + + LP V KA IRPD+V VH + +N+ Q YAVS AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMF PTK +RRWHRK+N NQ+RY P+LV ++GH I+ V E PLVVSD + V+KT Sbjct: 6 ARPLVSVYTEKNEPAKDKN--ICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKT 167 HSP 2 Score: 55.4546 bits (132), Expect = 5.032e-59 Identity = 31/91 (34.07%), Postives = 52/91 (57.14%), Query Frame = 3 Query: 591 LKQIGAYADAQKAKDSQGIRPGKAKMKNTLYISSQDPLDVYSPEGAKLCQGFKNLPRVKGVKVEKIDWLKLAPGAPPEGVIA*TKPAFENL 863 L+++ +AD QK SQ R G+ M++ I+ + PL VY + L + F+N+P ++ + V+K++ LKLAPG + T+ AF L Sbjct: 174 LRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGPLVVYDKDEG-LRKAFRNIPGIETINVDKLNLLKLAPGGHVGRFVIWTESAFARL 263
BLAST of DY258332 vs. ExPASy Swiss-Prot
Match: RL4_DICDI (60S ribosomal protein L4 OS=Dictyostelium discoideum GN=rpl4 PE=1 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 8.560e-59 Identity = 89/164 (54.27%), Postives = 118/164 (71.95%), Query Frame = 1 Query: 82 RPVIIIISVEGDMVTDASSTVPLPDVMKASIRPDIVGFVHSNISQNSPQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFTPTKIWRRWHRKINDNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVV-SDSAESVEKT 570 RP + + + +V V LP+V+ IRPD+V FVH+N+++N+ Q Y + AG QTSAESWGTGRAV+RIPRVPG GTHR+GQGAFGNMCRGGRM+ P K WRRW+RK+N NQKRY P+LVMARGH+I + E+PLV+ ++S ++++KT Sbjct: 4 RPFVQVFDAQNKVV----GKVKLPNVLTTPIRPDLVNFVHTNLNKNARQAYGAAPYAGEQTSAESWGTGRAVARIPRVPGSGTHRSGQGAFGNMCRGGRMYGPNKTWRRWNRKVNVNQKRYAVVSALAASAVPALVMARGHRINGINEVPLVIANESVDTLQKT 163 HSP 2 Score: 61.6178 bits (148), Expect = 8.560e-59 Identity = 38/94 (40.43%), Postives = 53/94 (56.38%), Query Frame = 3 Query: 582 LKVLKQIGAYADAQKAKDSQGIRPGKAKMKNTLYISSQDPLDVYSPEGAKLCQGFKNLPRVKGVKVEKIDWLKLAPGAPPEGVIA*TKPAFENL 863 +++LK+I AYAD K DS+ IR G K +N Y + PL V S + + Q +N+P V+ V +++ LKLAPG I TK AFE L Sbjct: 167 VELLKKINAYADVTKVIDSKHIRAGAGKARNRRYKVRKGPLVVVSGK-TTVSQALRNIPGVEVANVSRLNLLKLAPGGHLGRFIIWTKSAFEQL 259
BLAST of DY258332 vs. ExPASy Swiss-Prot
Match: RL4_TRYBB (60S ribosomal protein L4 OS=Trypanosoma brucei brucei GN=RPL4 PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.246e-56 Identity = 95/164 (57.93%), Postives = 115/164 (70.12%), Query Frame = 1 Query: 79 ARPVIIIISVEGDMVTDASSTVPLPDVMKASIRPDIVGFVHSNISQNSPQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFTPTKIWRRWHRKINDNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKT 570 ARP + + S D V T LP V A IR D+V FVH+N+++NS QPYAV+R +G + S ESWGTGRAV+RIPR+ GGGT +G GAFGNMCRGGRMF PTKI+RRWHRKIN +QKR+ P+LVM+RGHKIE V E+PLVV D + EKT Sbjct: 3 ARPSVSVYSASEDKVV---GTCSLPAVFTAPIRHDVVQFVHTNMAKNSRQPYAVNRLSGMKHSTESWGTGRAVARIPRIHGGGTSMSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKRFAVVSALAASSLPALVMSRGHKIENVAEVPLVVEDGVRAYEKT 163 HSP 2 Score: 52.7582 bits (125), Expect = 2.246e-56 Identity = 33/93 (35.48%), Postives = 48/93 (51.61%), Query Frame = 3 Query: 591 LKQIGAYADAQKAKDSQGIRPGKAKMKNTLYISSQDPLDVYSPEGAKLCQGFKNLPRVKGVKVEKIDWLKLAPGAPPEGVIA*TKPAFENLIK 869 LK +GA D + DS+ IR G+ KM+N Y++ + P+ V K + F+N+ + V ++ L LAPG I TK AFE L K Sbjct: 170 LKTVGAIDDVNRVNDSRQIRAGRGKMRNRRYVARRGPMLVMPDN--KGTRAFRNIFGLDLANVNSLNLLHLAPGGHVGRFIIWTKSAFEKLDK 260 The following BLAST results are available for this feature:
BLAST of DY258332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258332 ID=DY258332; Name=DY258332; organism=Citrus clementina; type=EST; length=1272bpback to top |