DY258332
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258332 vs. ExPASy Swiss-Prot
Match: RL4_PRUAR (60S ribosomal protein L4 OS=Prunus armeniaca GN=RPL4 PE=2 SV=1) HSP 1 Score: 270.781 bits (691), Expect = 1.240e-96 Identity = 131/164 (79.88%), Postives = 141/164 (85.98%), Query Frame = 1 Query: 79 ARPVIIIISVEGDMVTDASSTVPLPDVMKASIRPDIVGFVHSNISQNSPQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFTPTKIWRRWHRKINDNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKT 570 ARP++ + S+EGDM TD + TV LPDVMKASIRPDIV FVHSNIS+NS QPYAVS+KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMF PTKIWRRWHRKIN NQKRY PSLV+ARGHKIETVPE+PLVVSDS E VE+T Sbjct: 8 ARPLVTVQSLEGDMATDQTQTVALPDVMKASIRPDIVTFVHSNISKNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAVVSAIAASAVPSLVLARGHKIETVPELPLVVSDSIEGVEET 171 HSP 2 Score: 105.531 bits (262), Expect = 1.240e-96 Identity = 54/100 (54.00%), Postives = 68/100 (68.00%), Query Frame = 3 Query: 564 ENHQLPLKVLKQIGAYADAQKAKDSQGIRPGKAKMKNTLYISSQDPLDVYSPEGAKLCQGFKNLPRVKGVKVEKIDWLKLAPGAPPEGVIA*TKPAFENL 863 E LKVLKQIGAY+DA+KAKDS IRPGK KM+N YI+ + PL VY EGAKL + F+N+P + + VE+++ LKLAPG + TK AFE L Sbjct: 169 EETSAALKVLKQIGAYSDAEKAKDSHSIRPGKGKMRNRRYINRKGPLIVYGTEGAKLVKAFRNIPGIDIINVERLNLLKLAPGGHLGRFVVWTKSAFEKL 268
BLAST of DY258332 vs. ExPASy Swiss-Prot
Match: RL4A_ARATH (60S ribosomal protein L4-1 OS=Arabidopsis thaliana GN=RPL4A PE=2 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 6.722e-92 Identity = 124/164 (75.61%), Postives = 137/164 (83.54%), Query Frame = 1 Query: 79 ARPVIIIISVEGDMVTDASSTVPLPDVMKASIRPDIVGFVHSNISQNSPQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFTPTKIWRRWHRKINDNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKT 570 ARP++ I +++GDM TD SSTV LPDVM A +RPDIV FVH+ IS NS QPYAVS+KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMF PTKIWRRWHR++N N KR+ P+LVMARGHKIE VPEMPLVVSDSAE+VEKT Sbjct: 6 ARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKT 169 HSP 2 Score: 102.449 bits (254), Expect = 6.722e-92 Identity = 55/103 (53.40%), Postives = 69/103 (66.99%), Query Frame = 3 Query: 555 ECGENHQLPLKVLKQIGAYADAQKAKDSQGIRPGKAKMKNTLYISSQDPLDVYSPEGAKLCQGFKNLPRVKGVKVEKIDWLKLAPGAPPEGVIA*TKPAFENL 863 E E +KVLKQIGAY DA+KAK+S GIRPGK KM+N YIS + PL VY EG+K+ + F+NLP V+ VE+++ LKLAPG + TK AFE L Sbjct: 164 EAVEKTSAAIKVLKQIGAYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVERLNLLKLAPGGHLGRFVIWTKSAFEKL 266
BLAST of DY258332 vs. ExPASy Swiss-Prot
Match: RL4B_ARATH (60S ribosomal protein L4-2 OS=Arabidopsis thaliana GN=RPL4D PE=1 SV=2) HSP 1 Score: 256.529 bits (654), Expect = 2.539e-91 Identity = 122/164 (74.39%), Postives = 136/164 (82.93%), Query Frame = 1 Query: 79 ARPVIIIISVEGDMVTDASSTVPLPDVMKASIRPDIVGFVHSNISQNSPQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFTPTKIWRRWHRKINDNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKT 570 ARP++ + ++GDM TD S+TV LPDVM A +RPDIV FVH+ IS NS QPYAVS+KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMF PTKIWRRWHR++N N KR+ P+LVMARGHKIE VPEMPLVVSDSAE+VEKT Sbjct: 7 ARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKT 170 HSP 2 Score: 102.064 bits (253), Expect = 2.539e-91 Identity = 55/103 (53.40%), Postives = 69/103 (66.99%), Query Frame = 3 Query: 555 ECGENHQLPLKVLKQIGAYADAQKAKDSQGIRPGKAKMKNTLYISSQDPLDVYSPEGAKLCQGFKNLPRVKGVKVEKIDWLKLAPGAPPEGVIA*TKPAFENL 863 E E +KVLKQIGAY DA+KAK+S GIRPGK KM+N YIS + PL V+ EGAK+ + F+NLP V+ VE+++ LKLAPG + TK AFE L Sbjct: 165 EAVEKTSAAIKVLKQIGAYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVERLNLLKLAPGGHLGRFVIWTKSAFEKL 267
BLAST of DY258332 vs. ExPASy Swiss-Prot
Match: RL4B_XENLA (60S ribosomal protein L4-B (Fragment) OS=Xenopus laevis GN=rpl4-B PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 2.533e-67 Identity = 102/164 (62.20%), Postives = 125/164 (76.22%), Query Frame = 1 Query: 79 ARPVIIIISVEGDMVTDASSTVPLPDVMKASIRPDIVGFVHSNISQNSPQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFTPTKIWRRWHRKINDNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKT 570 ARP+I + S +G+ + V +P V KA IRPDIV FVH+N+ +N+ QPYAVS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMF PTK WRRWHR++N QKRY P+L+M++GH+IE +PE+PLVV D ES +KT Sbjct: 3 ARPLISVYSEKGET---SGKNVTMPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSKLAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAVCSALAASALPALIMSKGHRIEEIPEVPLVVEDKVESYKKT 163 HSP 2 Score: 60.077 bits (144), Expect = 2.533e-67 Identity = 45/152 (29.61%), Postives = 69/152 (45.39%), Query Frame = 3 Query: 588 VLKQIGAYADAQKAKDSQGIRPGKAKMKNTLYISSQDPLDVYSPEGAKLCQGFKNLPRVKGVKVEKIDWLKLAPGAPPEGVIA*TKPAFENLIKFMEXXXXXXXXXXXXXXXXXNMAHPDFVLIFKTQKEGPARRKANSH*R*KRFNEKKNP 1043 +LK++ A+ D +K SQ +R GK KM+N I + P +Y+ E + + F+N+P + + V K++ L+LAPG T+ AF L M + D I K+Q+ A R N + KR KKNP Sbjct: 169 LLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCVIYN-ENNGIIKAFRNIPGITLLNVSKLNLLRLAPGGHVGRFCIWTESAFRKLDDLYGTWRKSAKLKADYNLPMHKMTNTDLTRILKSQEIQRALRAPNK--KVKRRELKKNP 317
BLAST of DY258332 vs. ExPASy Swiss-Prot
Match: RL4A_XENLA (60S ribosomal protein L4-A OS=Xenopus laevis GN=rpl4-A PE=2 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 2.533e-67 Identity = 101/164 (61.59%), Postives = 125/164 (76.22%), Query Frame = 1 Query: 79 ARPVIIIISVEGDMVTDASSTVPLPDVMKASIRPDIVGFVHSNISQNSPQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFTPTKIWRRWHRKINDNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKT 570 ARP+I + S +G+ + V +P V +A IRPDIV FVH+N+ +N+ QPYAVS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMF PTK WRRWHR++N QKRY P+L+M++GH+IE +PE+PLVV D ES +KT Sbjct: 8 ARPLISVYSEKGE---SSGKNVTMPAVFRAPIRPDIVNFVHTNLRKNNRQPYAVSKLAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAVCSALAASALPALIMSKGHRIEEIPEVPLVVEDKVESYKKT 168 HSP 2 Score: 60.8474 bits (146), Expect = 2.533e-67 Identity = 46/152 (30.26%), Postives = 69/152 (45.39%), Query Frame = 3 Query: 588 VLKQIGAYADAQKAKDSQGIRPGKAKMKNTLYISSQDPLDVYSPEGAKLCQGFKNLPRVKGVKVEKIDWLKLAPGAPPEGVIA*TKPAFENLIKFMEXXXXXXXXXXXXXXXXXNMAHPDFVLIFKTQKEGPARRKANSH*R*KRFNEKKNP 1043 +LK++ A+ D +K SQ +R GK KM+N I + P +Y+ E L + F+N+P + + V K++ L+LAPG T+ AF L M + D I K+Q+ A R N + KR KKNP Sbjct: 174 LLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCVIYN-ENNGLVKAFRNIPGITLLNVSKLNLLRLAPGGHVGRFCIWTESAFRKLDDLYGTWRKSAKLKADYNLPMHKMTNTDLTRILKSQEIQRALRAPNK--KVKRRELKKNP 322
BLAST of DY258332 vs. ExPASy Swiss-Prot
Match: RL4_MOUSE (60S ribosomal protein L4 OS=Mus musculus GN=Rpl4 PE=1 SV=3) HSP 1 Score: 218.394 bits (555), Expect = 7.983e-66 Identity = 104/164 (63.41%), Postives = 123/164 (75.00%), Query Frame = 1 Query: 79 ARPVIIIISVEGDMVTDASSTVPLPDVMKASIRPDIVGFVHSNISQNSPQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFTPTKIWRRWHRKINDNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKT 570 ARP+I + S +G+ + V LP V KA IRPDIV FVH+N+ +N+ QPYAVS AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMF PTK WRRWHR++N QKRY P+LVM++GH+IE VPE+PLVV D E +KT Sbjct: 4 ARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKT 164 HSP 2 Score: 55.0694 bits (131), Expect = 7.983e-66 Identity = 31/94 (32.98%), Postives = 53/94 (56.38%), Query Frame = 3 Query: 582 LKVLKQIGAYADAQKAKDSQGIRPGKAKMKNTLYISSQDPLDVYSPEGAKLCQGFKNLPRVKGVKVEKIDWLKLAPGAPPEGVIA*TKPAFENL 863 +++LK++ A+ D +K SQ +R GK KM+N I + P +Y+ + + + F+N+P + + V K++ LKLAPG T+ AF L Sbjct: 168 VQLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG-IIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKL 260
BLAST of DY258332 vs. ExPASy Swiss-Prot
Match: RL4_HUMAN (60S ribosomal protein L4 OS=Homo sapiens GN=RPL4 PE=1 SV=5) HSP 1 Score: 218.394 bits (555), Expect = 1.357e-65 Identity = 104/164 (63.41%), Postives = 123/164 (75.00%), Query Frame = 1 Query: 79 ARPVIIIISVEGDMVTDASSTVPLPDVMKASIRPDIVGFVHSNISQNSPQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFTPTKIWRRWHRKINDNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKT 570 ARP+I + S +G+ + V LP V KA IRPDIV FVH+N+ +N+ QPYAVS AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMF PTK WRRWHR++N QKRY P+LVM++GH+IE VPE+PLVV D E +KT Sbjct: 4 ARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKT 164 HSP 2 Score: 54.299 bits (129), Expect = 1.357e-65 Identity = 31/92 (33.70%), Postives = 51/92 (55.43%), Query Frame = 3 Query: 588 VLKQIGAYADAQKAKDSQGIRPGKAKMKNTLYISSQDPLDVYSPEGAKLCQGFKNLPRVKGVKVEKIDWLKLAPGAPPEGVIA*TKPAFENL 863 +LK++ A+ D +K SQ +R GK KM+N I + P +Y+ + + + F+N+P + + V K++ LKLAPG T+ AF L Sbjct: 170 LLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG-IIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKL 260
BLAST of DY258332 vs. ExPASy Swiss-Prot
Match: RL4_BOVIN (60S ribosomal protein L4 OS=Bos taurus GN=RPL4 PE=2 SV=3) HSP 1 Score: 218.394 bits (555), Expect = 1.357e-65 Identity = 104/164 (63.41%), Postives = 123/164 (75.00%), Query Frame = 1 Query: 79 ARPVIIIISVEGDMVTDASSTVPLPDVMKASIRPDIVGFVHSNISQNSPQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFTPTKIWRRWHRKINDNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKT 570 ARP+I + S +G+ + V LP V KA IRPDIV FVH+N+ +N+ QPYAVS AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMF PTK WRRWHR++N QKRY P+LVM++GH+IE VPE+PLVV D E +KT Sbjct: 4 ARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKT 164 HSP 2 Score: 54.299 bits (129), Expect = 1.357e-65 Identity = 31/92 (33.70%), Postives = 51/92 (55.43%), Query Frame = 3 Query: 588 VLKQIGAYADAQKAKDSQGIRPGKAKMKNTLYISSQDPLDVYSPEGAKLCQGFKNLPRVKGVKVEKIDWLKLAPGAPPEGVIA*TKPAFENL 863 +LK++ A+ D +K SQ +R GK KM+N I + P +Y+ + + + F+N+P + + V K++ LKLAPG T+ AF L Sbjct: 170 LLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG-IIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKL 260
BLAST of DY258332 vs. ExPASy Swiss-Prot
Match: RL4_RAT (60S ribosomal protein L4 OS=Rattus norvegicus GN=Rpl4 PE=1 SV=3) HSP 1 Score: 217.624 bits (553), Expect = 1.357e-65 Identity = 104/164 (63.41%), Postives = 123/164 (75.00%), Query Frame = 1 Query: 79 ARPVIIIISVEGDMVTDASSTVPLPDVMKASIRPDIVGFVHSNISQNSPQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFTPTKIWRRWHRKINDNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKT 570 ARP+I + S +G+ + V LP V KA IRPDIV FVH+N+ +N+ QPYAVS AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMF PTK WRRWHR++N QKRY P+LVM++GH +E VPE+PLVV D ES +KT Sbjct: 4 ARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHCVEEVPELPLVVEDKVESYKKT 164 HSP 2 Score: 55.0694 bits (131), Expect = 1.357e-65 Identity = 31/94 (32.98%), Postives = 53/94 (56.38%), Query Frame = 3 Query: 582 LKVLKQIGAYADAQKAKDSQGIRPGKAKMKNTLYISSQDPLDVYSPEGAKLCQGFKNLPRVKGVKVEKIDWLKLAPGAPPEGVIA*TKPAFENL 863 +++LK++ A+ D +K SQ +R GK KM+N I + P +Y+ + + + F+N+P + + V K++ LKLAPG T+ AF L Sbjct: 168 VQLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG-IIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKL 260
BLAST of DY258332 vs. ExPASy Swiss-Prot
Match: RL4_MACFA (60S ribosomal protein L4 OS=Macaca fascicularis GN=RPL4 PE=2 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 2.308e-65 Identity = 104/164 (63.41%), Postives = 122/164 (74.39%), Query Frame = 1 Query: 79 ARPVIIIISVEGDMVTDASSTVPLPDVMKASIRPDIVGFVHSNISQNSPQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFTPTKIWRRWHRKINDNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKT 570 ARP+I + S +G+ + V LP V KA IRPDIV FVH+N+ +N+ QPYAVS AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMF PTK WRRWHR++N QKRY P+LVM++GH IE VPE+PLVV D E +KT Sbjct: 4 ARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHSIEEVPELPLVVEDKVEGYKKT 164 HSP 2 Score: 54.299 bits (129), Expect = 2.308e-65 Identity = 31/92 (33.70%), Postives = 51/92 (55.43%), Query Frame = 3 Query: 588 VLKQIGAYADAQKAKDSQGIRPGKAKMKNTLYISSQDPLDVYSPEGAKLCQGFKNLPRVKGVKVEKIDWLKLAPGAPPEGVIA*TKPAFENL 863 +LK++ A+ D +K SQ +R GK KM+N I + P +Y+ + + + F+N+P + + V K++ LKLAPG T+ AF L Sbjct: 170 LLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG-IIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKL 260 The following BLAST results are available for this feature:
BLAST of DY258332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258332 ID=DY258332; Name=DY258332; organism=Citrus clementina; type=EST; length=1272bpback to top |