DY259907
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259907 vs. ExPASy Swiss-Prot
Match: PSA5_BOVIN (Proteasome subunit alpha type-5 OS=Bos taurus GN=PSMA5 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.311e-12 Identity = 34/87 (39.08%), Postives = 56/87 (64.37%), Query Frame = 1 Query: 46 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVCVRKS 306 S+Y + TFSP G+L Q+E+A+ A+ G T++GI+ S GV +A EK++ S L++ SS+ KI + +IG SG+ D + + K+ Sbjct: 6 SEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKA 92
BLAST of DY259907 vs. ExPASy Swiss-Prot
Match: PSMA_METM6 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=psmA PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.324e-12 Identity = 40/112 (35.71%), Postives = 64/112 (57.14%), Query Frame = 1 Query: 46 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVCVRKSTTLAYRNAH*QGTQTPVKKFKRYRC 381 S Y ++T FSP G+L Q+E+A AV G T++GIK ++GVV+A ++++ S L+D SS+ KI + +I SG+ D RV + ++ A N G V+ + C Sbjct: 8 SGYDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCNDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKIC 119
BLAST of DY259907 vs. ExPASy Swiss-Prot
Match: PSMA_METB6 (Proteasome subunit alpha OS=Methanoregula boonei (strain 6A8) GN=psmA PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.324e-12 Identity = 40/112 (35.71%), Postives = 63/112 (56.25%), Query Frame = 1 Query: 52 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVCVRKSTTLAYRNAH*QGTQTPVKKFKRYRCGH 387 Y ++T FSP G+L Q+E+A AV G T++GIKA +GVV+ +K++ S L++ SS+ KI + +IGV SG+ D R V ++ N + V+ + C H Sbjct: 9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKAHDGVVLIVDKRVSSKLLESSSIEKIFKIDEHIGVASSGLVGDARALVDRARIECQINRVSYDERIEVEALAKKLCDH 120
BLAST of DY259907 vs. ExPASy Swiss-Prot
Match: PSMA_METPE (Proteasome subunit alpha OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=psmA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.648e-12 Identity = 39/112 (34.82%), Postives = 64/112 (57.14%), Query Frame = 1 Query: 52 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVCVRKSTTLAYRNAH*QGTQTPVKKFKRYRCGH 387 Y ++T FSP G+L Q+E+A AV G T++GIK ++G+V+ +K++ S L++ SS+ KI + +IGV SG+ D R V ++ + N Q V+ + C H Sbjct: 9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKCNDGIVLLVDKRVNSKLLEPSSIEKIFKIDNHIGVASSGLVGDARSLVDRARVESQVNRVSYDEQIDVEMLSKKLCDH 120
BLAST of DY259907 vs. ExPASy Swiss-Prot
Match: PSMA_METMP (Proteasome subunit alpha OS=Methanococcus maripaludis GN=psmA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.648e-12 Identity = 40/112 (35.71%), Postives = 63/112 (56.25%), Query Frame = 1 Query: 46 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVCVRKSTTLAYRNAH*QGTQTPVKKFKRYRC 381 S Y ++T FSP G+L Q+E+A AV G T++GIK +GVV+A ++++ S L+D SS+ KI + +I SG+ D RV + ++ A N G V+ + C Sbjct: 8 SGYDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARIEAQMNRVSYGEAITVEALAKKIC 119
BLAST of DY259907 vs. ExPASy Swiss-Prot
Match: PSMA_METM7 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=psmA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.648e-12 Identity = 40/112 (35.71%), Postives = 63/112 (56.25%), Query Frame = 1 Query: 46 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVCVRKSTTLAYRNAH*QGTQTPVKKFKRYRC 381 S Y ++T FSP G+L Q+E+A AV G T++GIK +GVV+A ++++ S L+D SS+ KI + +I SG+ D RV + ++ A N G V+ + C Sbjct: 8 SGYDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKIC 119
BLAST of DY259907 vs. ExPASy Swiss-Prot
Match: PSMA_METM5 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=psmA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.648e-12 Identity = 40/112 (35.71%), Postives = 63/112 (56.25%), Query Frame = 1 Query: 46 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVCVRKSTTLAYRNAH*QGTQTPVKKFKRYRC 381 S Y ++T FSP G+L Q+E+A AV G T++GIK +GVV+A ++++ S L+D SS+ KI + +I SG+ D RV + ++ A N G V+ + C Sbjct: 8 SGYDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKIC 119
BLAST of DY259907 vs. ExPASy Swiss-Prot
Match: PSMA_METVS (Proteasome subunit alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=psmA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 7.376e-12 Identity = 40/112 (35.71%), Postives = 63/112 (56.25%), Query Frame = 1 Query: 46 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVCVRKSTTLAYRNAH*QGTQTPVKKFKRYRC 381 S Y ++T FSP G+L Q+E+A AV G T++GIK +GVV+A ++++ S L+D SS+ KI + +I SG+ D RV + ++ A N G V+ + C Sbjct: 8 SGYDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARVEAQVNRISYGEAITVEALAKKIC 119
BLAST of DY259907 vs. ExPASy Swiss-Prot
Match: PSMA_METTE (Proteasome subunit alpha OS=Methanosarcina thermophila GN=psmA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 7.376e-12 Identity = 37/92 (40.22%), Postives = 57/92 (61.96%), Query Frame = 1 Query: 52 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVCVRKSTTLAYRN 327 Y ++T FSP G+L Q+E+A AV G T++GIKA++GVV+ +K++ S LV+ S+ KI + +IG SG+ D R V ++ A N Sbjct: 7 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARALVDRARVEAQVN 98
BLAST of DY259907 vs. ExPASy Swiss-Prot
Match: PSMA_METTH (Proteasome subunit alpha OS=Methanobacterium thermoautotrophicum GN=psmA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.634e-12 Identity = 36/100 (36.00%), Postives = 58/100 (58.00%), Query Frame = 1 Query: 28 LKKMGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVCVRKSTTLAYRN 327 ++ + + Y ++T FSP G+L Q+E+A AV G TSLG+K+ G+V+ +K+ S LV+ S+ KI + +IG SG+ D R + K+ A N Sbjct: 1 MQPLQSAGYDRAITVFSPDGRLFQVEYAREAVKRGTTSLGVKSKEGIVLVVDKRPTSKLVEPKSIEKIFQIDEHIGAATSGLVADARAIIEKARLEAQIN 100 The following BLAST results are available for this feature:
BLAST of DY259907 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259907 ID=DY259907; Name=DY259907; organism=Citrus clementina; type=EST; length=955bpback to top |