DY259907
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259907 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSJ (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. japonica GN=PAB1 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 7.563e-41 Identity = 86/90 (95.56%), Postives = 88/90 (97.78%), Query Frame = 1 Query: 37 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVCVRKS 306 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKA+NGVVIATEKKLPSILVDE+SV KIQSLTPNIGVVYSGMGPDFRV VRKS Sbjct: 1 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKS 90
BLAST of DY259907 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSI (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. indica GN=PAB1 PE=2 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 7.563e-41 Identity = 86/90 (95.56%), Postives = 88/90 (97.78%), Query Frame = 1 Query: 37 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVCVRKS 306 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKA+NGVVIATEKKLPSILVDE+SV KIQSLTPNIGVVYSGMGPDFRV VRKS Sbjct: 1 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKS 90
BLAST of DY259907 vs. ExPASy Swiss-Prot
Match: PSA2A_ARATH (Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana GN=PAB1 PE=1 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.290e-40 Identity = 86/90 (95.56%), Postives = 87/90 (96.67%), Query Frame = 1 Query: 37 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVCVRKS 306 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDE+SV KIQ LTPNIGVVYSGMGPDFRV VRKS Sbjct: 1 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQKIQHLTPNIGVVYSGMGPDFRVLVRKS 90
BLAST of DY259907 vs. ExPASy Swiss-Prot
Match: PSA2B_ARATH (Proteasome subunit alpha type-2-B OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.753e-40 Identity = 85/90 (94.44%), Postives = 86/90 (95.56%), Query Frame = 1 Query: 37 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVCVRKS 306 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDE+SV KIQ LTPNIG VYSGMGPDFRV VRKS Sbjct: 1 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQKIQHLTPNIGTVYSGMGPDFRVLVRKS 90
BLAST of DY259907 vs. ExPASy Swiss-Prot
Match: PSA2_CARAU (Proteasome subunit alpha type-2 OS=Carassius auratus GN=psma2 PE=2 SV=3) HSP 1 Score: 132.109 bits (331), Expect = 4.599e-30 Identity = 67/94 (71.28%), Postives = 78/94 (82.98%), Query Frame = 1 Query: 37 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVCVRKSTTLA 318 M D YSFSLTTFSPSGKLVQIE+AL AV +G S+GIKASNGVV+ATEKK SIL DE SVHKI+ +T +IG+VYSGMGPD+RV VR++ LA Sbjct: 1 MADRGYSFSLTTFSPSGKLVQIEYALAAVAAGAPSVGIKASNGVVLATEKKQKSILYDEQSVHKIEPITKHIGMVYSGMGPDYRVLVRRARKLA 94
BLAST of DY259907 vs. ExPASy Swiss-Prot
Match: PSA2_XENLA (Proteasome subunit alpha type-2 OS=Xenopus laevis GN=psma2 PE=2 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 1.133e-28 Identity = 63/94 (67.02%), Postives = 77/94 (81.91%), Query Frame = 1 Query: 37 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVCVRKSTTLA 318 M + YSFSLTTFSPSGKLVQIE+AL AV +G S+GIKA+NGVV+ATEKK SIL DE S HK++ +T +IG+VYSGMGPD+RV VR++ LA Sbjct: 1 MAERGYSFSLTTFSPSGKLVQIEYALAAVAAGAPSVGIKATNGVVLATEKKQKSILYDEQSAHKVEPITKHIGMVYSGMGPDYRVLVRRARKLA 94
BLAST of DY259907 vs. ExPASy Swiss-Prot
Match: PSA2_RAT (Proteasome subunit alpha type-2 OS=Rattus norvegicus GN=Psma2 PE=1 SV=3) HSP 1 Score: 126.331 bits (316), Expect = 2.523e-28 Identity = 63/94 (67.02%), Postives = 76/94 (80.85%), Query Frame = 1 Query: 37 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVCVRKSTTLA 318 M + YSFSLTTFSPSGKLVQIE+AL AV G S+GIKA+NGVV+ATEKK SIL DE SVHK++ +T +IG+VYSGMGPD+RV V ++ LA Sbjct: 1 MAERGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLA 94
BLAST of DY259907 vs. ExPASy Swiss-Prot
Match: PSA2_HUMAN (Proteasome subunit alpha type-2 OS=Homo sapiens GN=PSMA2 PE=1 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 2.523e-28 Identity = 63/94 (67.02%), Postives = 76/94 (80.85%), Query Frame = 1 Query: 37 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVCVRKSTTLA 318 M + YSFSLTTFSPSGKLVQIE+AL AV G S+GIKA+NGVV+ATEKK SIL DE SVHK++ +T +IG+VYSGMGPD+RV V ++ LA Sbjct: 1 MAERGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLA 94
BLAST of DY259907 vs. ExPASy Swiss-Prot
Match: PSA2_BOVIN (Proteasome subunit alpha type-2 OS=Bos taurus GN=PSMA2 PE=1 SV=3) HSP 1 Score: 126.331 bits (316), Expect = 2.523e-28 Identity = 63/94 (67.02%), Postives = 76/94 (80.85%), Query Frame = 1 Query: 37 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVCVRKSTTLA 318 M + YSFSLTTFSPSGKLVQIE+AL AV G S+GIKA+NGVV+ATEKK SIL DE SVHK++ +T +IG+VYSGMGPD+RV V ++ LA Sbjct: 1 MAERGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLA 94
BLAST of DY259907 vs. ExPASy Swiss-Prot
Match: PSA2_MOUSE (Proteasome subunit alpha type-2 OS=Mus musculus GN=Psma2 PE=1 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 5.622e-28 Identity = 63/94 (67.02%), Postives = 75/94 (79.79%), Query Frame = 1 Query: 37 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVCVRKSTTLA 318 M YSFSLTTFSPSGKLVQIE+AL AV G S+GIKA+NGVV+ATEKK SIL DE SVHK++ +T +IG+VYSGMGPD+RV V ++ LA Sbjct: 1 MAKRGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLA 94 The following BLAST results are available for this feature:
BLAST of DY259907 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259907 ID=DY259907; Name=DY259907; organism=Citrus clementina; type=EST; length=955bpback to top |