DY259907
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259907 vs. ExPASy Swiss-Prot
Match: PSMA_METMJ (Proteasome subunit alpha OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=psmA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 8.155e-11 Identity = 35/85 (41.18%), Postives = 54/85 (63.53%), Query Frame = 1 Query: 52 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVCVRKS 306 Y ++T FSP G+L Q+E+A AV G T++GIK S GVV+ +K++ S L++ S+ KI + +IGV SG+ D R V ++ Sbjct: 9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKCSEGVVLIVDKRVTSRLLEPVSIEKIFKIDAHIGVASSGLVGDARSLVDRA 93
BLAST of DY259907 vs. ExPASy Swiss-Prot
Match: PSA7L_MOUSE (Proteasome subunit alpha type-7-like OS=Mus musculus GN=Psma8 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 8.155e-11 Identity = 34/87 (39.08%), Postives = 56/87 (64.37%), Query Frame = 1 Query: 46 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVCVRKS 306 S+Y ++T FSP G L Q+E+A AV G T++GI+ +N VV+ EKK + L DE +V KI +L ++ + ++G+ D RV + ++ Sbjct: 3 SRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALDDHVCMAFAGLTADARVVISRA 89
BLAST of DY259907 vs. ExPASy Swiss-Prot
Match: PSA6_TOBAC (Proteasome subunit alpha type-6 OS=Nicotiana tabacum GN=PAA1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 8.155e-11 Identity = 36/109 (33.03%), Postives = 63/109 (57.80%), Query Frame = 1 Query: 52 YSFSLTTFSPSGKLVQIEHALTAV-GSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVCVRKSTTLAYRNAH*QGTQTPVKKFKRY 375 Y +T FSP G+L Q+E+A AV +G TS+G++ + V + T+KK+P L+D++SV + +T +G++ +GM D R V+++ A G + PV ++ Sbjct: 9 YDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQTSVSHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFKYGYEMPVDVLSKW 117 The following BLAST results are available for this feature:
BLAST of DY259907 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259907 ID=DY259907; Name=DY259907; organism=Citrus clementina; type=EST; length=955bpback to top |