DY259989
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259989 vs. ExPASy Swiss-Prot
Match: SPL13_ARATH (Squamosa promoter-binding-like protein 13 OS=Arabidopsis thaliana GN=SPL13 PE=2 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 6.307e-40 Identity = 104/238 (43.70%), Postives = 137/238 (57.56%), Query Frame = 2 Query: 293 MDWNLKPAWDFTE-FEQEAIPNVDAVDES-----SSRTKGNFSVDLKLGQVNSSAED---------SLNKCKEPGASKMESPSPSGSFKRARAANNGS-QTASCLVDGCDSDLSNCRDYHRPHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGERNCRKRLEGHNQKQGNLSQIPCPDR-----NLFAQYQGPSY--YLSPFH*YPPARGGNPPGWSCKTEAKAGGKRGST 937 MDWN K + + F+QE P++ +D S SS++K +FS DLKLG+ ++ SL+K K+ +K E S S S KR R G+ Q CLVDGCDSD SNCR+YH+ HKVC++HSKTP V I G KQRFCQQCSRFH LEEFDEG+R+CRKRL+GHN+++ + P P+ N F +QG + H +P N P W + A GS+ Sbjct: 1 MDWNFKLSSGYLSGFDQE--PDLSPMDGSISFGGSSQSKADFSFDLKLGRNIGNSSSVFGDTEQVISLSKWKDSALAKPEG-SRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRR----RKPQPEHIGRPANFFTGFQGSKLLEFSGGSHVFPTTSVLN-PSWGNSLVSVAVAANGSS 230
BLAST of DY259989 vs. ExPASy Swiss-Prot
Match: SPL18_ORYSJ (Squamosa promoter-binding-like protein 18 OS=Oryza sativa subsp. japonica GN=SPL18 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.777e-34 Identity = 84/186 (45.16%), Postives = 110/186 (59.14%), Query Frame = 2 Query: 293 MDWNLKP--AWDFTEFEQEAIPNVDAVDESS-------SRTKG-----NFSVDLKLGQVNS-SAEDSLNK----CKEP------GASKMESPSPSGSFKRARAANNGS--QTASCLVDGCDSDLSNCRDYHRPHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGERNCRKRLEGHNQKQ 769 MDW+LK +WD E E A+PN+ A ++ + ++G SVDLKLG + A D+L + K P AS + P + + KR R G Q SC VDGC +DLS RDYHR HKVCE HSKTP V++ G++ RFCQQCSRFH L EFDE +R+CRKRL+GHN+++ Sbjct: 1 MDWDLKMPVSWDLAELEHNAVPNMAAAASAAEPGIAAVAASRGAPGRPECSVDLKLGGLGEFGAADALKEPAAAAKAPVSSAAAAASVAKVPPSTSTLKRPRGGGGGGGGQCPSCAVDGCKADLSKHRDYHRRHKVCEPHSKTPVVVVSGREMRFCQQCSRFHLLGEFDEAKRSCRKRLDGHNRRR 186
BLAST of DY259989 vs. ExPASy Swiss-Prot
Match: SPL16_ORYSJ (Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica GN=SPL16 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.965e-33 Identity = 89/216 (41.20%), Postives = 112/216 (51.85%), Query Frame = 2 Query: 293 MDWNLK----PAWDFT-EFEQEAIPNVDAVDESSSRTKGN-----------FSVDLKLG------------QVNSSAEDSLNKCKEPGASKMESPSPSGSFKRAR--AANNGSQTASCLVDGCDSDLSNCRDYHRPHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGERNCRKRLEGHNQKQGNLSQIPCPDRNLFAQYQGPSYYLSPF 850 M+W+LK +W+ E E V A SSS G SVDLKLG +V + E + K A+ + + S KR R AA Q SC VDGC DLS CRDYHR HKVCE HSKTP V++ G++ RFCQQCSRFH L+EFDE +R+CRKRL+GHN+++ P + A QG + SPF Sbjct: 1 MEWDLKMPPAASWELADELENSGGGGVPAAVSSSSAAVGGGVNAGGGGRQECSVDLKLGGLGEFGGGGAQPRVAVAGEPAKGKGPAAAATGAAAAASSAPAKRPRGAAAAGQQQCPSCAVDGCKEDLSKCRDYHRRHKVCEAHSKTPLVVVSGREMRFCQQCSRFHLLQEFDEAKRSCRKRLDGHNRRRRKPQPDPMNSASYLASQQGARF--SPF 214
BLAST of DY259989 vs. ExPASy Swiss-Prot
Match: SPL2_ORYSJ (Squamosa promoter-binding-like protein 2 OS=Oryza sativa subsp. japonica GN=SPL2 PE=2 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 8.256e-32 Identity = 93/226 (41.15%), Postives = 118/226 (52.21%), Query Frame = 2 Query: 293 MDWNLK-PAWDFTEFEQEAIPNVDAVDESSSRTKGNFSVDLKLG-----------QVNSSAEDSLNKCKEPGASKMESPSPSGSFKRARAANNGSQTA--SCLVDGCDSDLSNC-RDYHRPHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGERNCRKRLEGHNQKQGNLSQIPCPDRNLFAQYQGPSYYLSPFH*YPPARGGNP-----PGWSCKTEA 910 MDW+ K P+WD V G ++DLKLG S+A ++ P AS S + +G KRARA G Q A +C V+GC +DLS C RDYHR HKVCE HSKT V + GQ+QRFCQQCSRFH L EFDE +R+CRKRL+GHN+++ P NLFA + G + + S + A +P P KTEA Sbjct: 1 MDWDAKMPSWDLGTV-------VGPSGGGGGGGGGGGALDLKLGAPTSWKTTTTVSAASAAPAAVAPPPPPPASSSSSAAAAG--KRARAGQ-GQQAAVPACSVEGCAADLSKCVRDYHRRHKVCEAHSKTAVVTVAGQQQRFCQQCSRFHLLGEFDEEKRSCRKRLDGHNKRRRKPQPDPLNPGNLFANHHGAARFTSYPQIFSTAASMSPQETKWPANVVKTEA 216
BLAST of DY259989 vs. ExPASy Swiss-Prot
Match: SPL19_ORYSJ (Putative squamosa promoter-binding-like protein 19 OS=Oryza sativa subsp. japonica GN=SPL19 PE=3 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 1.457e-28 Identity = 58/117 (49.57%), Postives = 77/117 (65.81%), Query Frame = 2 Query: 512 KRARAANNGSQ-----TASCLVDGCDSDLSNCRDYHRPHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGERNCRKRLEGHNQKQGNLSQIPCPDRNLFAQYQGPSYYLSP 847 +RAR + G +C VDGC SDLS CRDYHR HKVCE H+KTP V++ GQ+QRFCQQCSRFH L EFD+G+++CRKRL+GHN+++ R+ +Q + + P Sbjct: 74 RRARGGSGGGGGGGGGAEACSVDGCRSDLSRCRDYHRRHKVCEAHAKTPVVVVAGQEQRFCQQCSRFHNLAEFDDGKKSCRKRLDGHNRRRRKPQHDALNPRSFLPYHQANQFSVYP 190
BLAST of DY259989 vs. ExPASy Swiss-Prot
Match: SPL14_ARATH (Squamosa promoter-binding-like protein 14 OS=Arabidopsis thaliana GN=SPL14 PE=2 SV=3) HSP 1 Score: 122.479 bits (306), Expect = 3.589e-27 Identity = 69/168 (41.07%), Postives = 96/168 (57.14%), Query Frame = 2 Query: 296 DWNLKPAWDFTEFEQEAIPNVDAVDESSSRTKGNFS-----VDLKLGQVNSSAEDSLNKCKEPGASKMESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRPHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGERNCRKRLEGHNQKQGNLSQ 784 +WN K WD+ EA P VD + T N S +DL LG ++ E++ + ++ P+ K+ R+ + G C VD C DLS+ +DYHR HKVCE+HSK + L+ Q QRFCQQCSRFH L EFDEG+R+CR+RL GHN+++ +Q Sbjct: 42 EWNSK-MWDWDSRRFEAKP-VDVEVQEFDLTLRNRSGEERGLDLNLGSGLTAVEET--------TTTTQNVRPN---KKVRSGSPGGNYPMCQVDNCTEDLSHAKDYHRRHKVCEVHSKATKALVGKQMQRFCQQCSRFHLLSEFDEGKRSCRRRLAGHNRRRRKTTQ 196
BLAST of DY259989 vs. ExPASy Swiss-Prot
Match: SPL6_ARATH (Squamosa promoter-binding-like protein 6 OS=Arabidopsis thaliana GN=SPL6 PE=2 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 1.970e-25 Identity = 50/86 (58.14%), Postives = 67/86 (77.91%), Query Frame = 2 Query: 512 KRARAANNGSQTASCLVDGCDSDLSNCRDYHRPHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGERNCRKRLEGHNQKQ 769 K++RA+N SQ C V GC DLS+ +DYH+ H+VCE HSKT V++ G +QRFCQQCSRFH L EFD+G+R+CR+RL GHN+++ Sbjct: 110 KKSRASNLCSQNPLCQVYGCSKDLSSSKDYHKRHRVCEAHSKTSVVIVNGLEQRFCQQCSRFHFLSEFDDGKRSCRRRLAGHNERR 195
BLAST of DY259989 vs. ExPASy Swiss-Prot
Match: SPL2_ARATH (Squamosa promoter-binding-like protein 2 OS=Arabidopsis thaliana GN=SPL2 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 3.360e-25 Identity = 64/158 (40.51%), Postives = 94/158 (59.49%), Query Frame = 2 Query: 320 DFTEFEQEAIPNVDA--VDESSSRT----KGNFSVDLKLGQVNSSAED--SLNKCKEPGASKMESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRPHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGERNCRKRLEGHNQKQ 769 +FT E++P A +D S S G+ + LKLG+ + ED + K G + S K++++ QT C V+GC+ DLS+ +DYHR H++CE HSK P+V++ G ++RFCQQCSRFHCL EFDE +R+CR+RL HN ++ Sbjct: 84 NFTSETGESLPGEFAKGIDTSPSLELSFGSGDPVLGLKLGK-RTYFEDFWEVENAKGLGLPVTLASSSVSPVKKSKSIPQRLQTPHCQVEGCNLDLSSAKDYHRKHRICENHSKFPKVVVSGVERRFCQQCSRFHCLSEFDEKKRSCRRRLSDHNARR 240
BLAST of DY259989 vs. ExPASy Swiss-Prot
Match: SPL10_ARATH (Squamosa promoter-binding-like protein 10 OS=Arabidopsis thaliana GN=SPL10 PE=2 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 7.484e-25 Identity = 55/121 (45.45%), Postives = 77/121 (63.64%), Query Frame = 2 Query: 410 LKLGQVNSSAEDSLNKCKEPGASKMESPSPSG-SFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRPHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGERNCRKRLEGHNQKQ 769 LKLG+ S E + A M +PS + K+ ++ Q C +DGC+ DLS+ +DYHR H+VCE HSK P+V++ G ++RFCQQCSRFH + EFDE +R+CRKRL HN ++ Sbjct: 127 LKLGKRTYSEEFWGRNNNDLSAVSMNLLTPSVVARKKTKSCGQSMQVPRCQIDGCELDLSSSKDYHRKHRVCETHSKCPKVVVSGLERRFCQQCSRFHAVSEFDEKKRSCRKRLSHHNARR 247
BLAST of DY259989 vs. ExPASy Swiss-Prot
Match: SPL3_ORYSJ (Squamosa promoter-binding-like protein 3 OS=Oryza sativa subsp. japonica GN=SPL3 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 2.178e-24 Identity = 56/125 (44.80%), Postives = 80/125 (64.00%), Query Frame = 2 Query: 404 VDLKLGQVNSSAED---SLNKCKEPGASKMESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRPHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGERNCRKRLEGHNQKQ 769 + LKLG+ + ED N P + +PSP G K+ + A +Q C V+GC+ DLS+ + YHR H+VCE HSKT +V++ G ++RFCQQCSRFH L EFD+ +R+CR+RL HN ++ Sbjct: 131 IGLKLGK-RTYFEDVCGGQNVKSSPSGVSVATPSP-GLAKKVKVAQQNTQNPHCQVEGCNVDLSSAKPYHRKHRVCEPHSKTLKVIVAGLERRFCQQCSRFHGLAEFDQKKRSCRRRLHDHNARR 253 The following BLAST results are available for this feature:
BLAST of DY259989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259989 ID=DY259989; Name=DY259989; organism=Citrus clementina; type=EST; length=946bpback to top |