DY260002
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260002 vs. ExPASy Swiss-Prot
Match: TERA_XENLA (Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp PE=1 SV=3) HSP 1 Score: 275.018 bits (702), Expect = 4.831e-73 Identity = 142/268 (52.99%), Postives = 181/268 (67.54%), Query Frame = 3 Query: 210 STAILDRKKSPNRLVVDEAINDDNSVITMHPNTMEKLQFFRGDTVLVKGKKRKDTVCVVLSDELCEESKVRVNKVVRSNLRVRLGDVVSVHPCPDVKYGRRVHILPIDDTIEGVTGNLFDAYLKPYFMESYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCVVAPDTEILCXXXXXXXXXXXXIN*SRP*RWWGW*KSNGSNPWA*KTS-----P*TPPAFPNPLGGSPPKRNPALWAPPGPEKTPDCRGRFPKRTGGLFSFLN*GP 998 STAIL +K PNRL+VDE+IN+DNS++++ M++LQ FRGDTVL+KGKKR++ VC+VLSD+ C + K+R+N+VVR+NLRVRLGDV+S+ PCPDVKYG+RVH+LPIDDT+EG+TGNLF+ YLKPYF+E+YRP+RKGD+FLVRGGMR+VEFKV+ETDP YC+VAPDT I C G+ G + P PA +G PP R L+ PPG KT R TG F +N GP Sbjct: 13 STAILKQKSRPNRLIVDESINEDNSMVSLSQAKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRVHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDE-----EESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPP-RGILLYGPPGTGKTLIARA-VANETGAFFFLIN-GP 272
BLAST of DY260002 vs. ExPASy Swiss-Prot
Match: TERA_PIG (Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1 SV=5) HSP 1 Score: 275.018 bits (702), Expect = 4.831e-73 Identity = 142/268 (52.99%), Postives = 180/268 (67.16%), Query Frame = 3 Query: 210 STAILDRKKSPNRLVVDEAINDDNSVITMHPNTMEKLQFFRGDTVLVKGKKRKDTVCVVLSDELCEESKVRVNKVVRSNLRVRLGDVVSVHPCPDVKYGRRVHILPIDDTIEGVTGNLFDAYLKPYFMESYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCVVAPDTEILCXXXXXXXXXXXXIN*SRP*RWWGW*KSNGSNPWA*KTS-----P*TPPAFPNPLGGSPPKRNPALWAPPGPEKTPDCRGRFPKRTGGLFSFLN*GP 998 STAIL +K PNRL+VDEAIN+DNSV+++ M++LQ FRGDTVL+KGKKR++ VC+VLSD+ C + K+R+N+VVR+NLRV LGDV+S+ PCPDVKYG+R+H+LPIDDT+EG+TGNLF+ YLKPYF+E+YRP+RKGD+FLVRGGMR+VEFKV+ETDP YC+VAPDT I C G+ G + P PA +G PP R L+ PPG KT R TG F +N GP Sbjct: 13 STAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDE-----EESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPP-RGILLYGPPGTGKTLIARA-VANETGAFFFLIN-GP 272
BLAST of DY260002 vs. ExPASy Swiss-Prot
Match: TERA_BOVIN (Transitional endoplasmic reticulum ATPase OS=Bos taurus GN=VCP PE=1 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 4.831e-73 Identity = 142/268 (52.99%), Postives = 180/268 (67.16%), Query Frame = 3 Query: 210 STAILDRKKSPNRLVVDEAINDDNSVITMHPNTMEKLQFFRGDTVLVKGKKRKDTVCVVLSDELCEESKVRVNKVVRSNLRVRLGDVVSVHPCPDVKYGRRVHILPIDDTIEGVTGNLFDAYLKPYFMESYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCVVAPDTEILCXXXXXXXXXXXXIN*SRP*RWWGW*KSNGSNPWA*KTS-----P*TPPAFPNPLGGSPPKRNPALWAPPGPEKTPDCRGRFPKRTGGLFSFLN*GP 998 STAIL +K PNRL+VDEAIN+DNSV+++ M++LQ FRGDTVL+KGKKR++ VC+VLSD+ C + K+R+N+VVR+NLRV LGDV+S+ PCPDVKYG+R+H+LPIDDT+EG+TGNLF+ YLKPYF+E+YRP+RKGD+FLVRGGMR+VEFKV+ETDP YC+VAPDT I C G+ G + P PA +G PP R L+ PPG KT R TG F +N GP Sbjct: 13 STAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDE-----EESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPP-RGILLYGPPGTGKTLIARA-VANETGAFFFLIN-GP 272
BLAST of DY260002 vs. ExPASy Swiss-Prot
Match: CDC48_YEAST (Cell division control protein 48 OS=Saccharomyces cerevisiae GN=CDC48 PE=1 SV=3) HSP 1 Score: 248.44 bits (633), Expect = 4.842e-65 Identity = 116/170 (68.24%), Postives = 144/170 (84.71%), Query Frame = 3 Query: 210 STAILDRKKSPNRLVVDEAINDDNSVITMHPNTMEKLQFFRGDTVLVKGKKRKDTVCVVLSDELCEESKVRVNKVVRSNLRVRLGDVVSVHPCPDVKYGRRVHILPIDDTIEGVTGNLFDAYLKPYFMESYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCVVAPDTEI 719 +TAIL RKK N L+VD+AINDDNSVI ++ NTM+KL+ FRGDTVLVKGKKRKDTV +VL D+ E+ R+N+VVR+NLR+RLGD+V++HPCPD+KY R+ +LPI DTIEG+TGNLFD +LKPYF+E+YRPVRKGD F+VRGGMR VEFKV++ +P EY VVA DT I Sbjct: 23 ATAILRRKKKDNMLLVDDAINDDNSVIAINSNTMDKLELFRGDTVLVKGKKRKDTVLIVLIDDELEDGACRINRVVRNNLRIRLGDLVTIHPCPDIKYATRISVLPIADTIEGITGNLFDVFLKPYFVEAYRPVRKGDHFVVRGGMRQVEFKVVDVEPEEYAVVAQDTII 192
BLAST of DY260002 vs. ExPASy Swiss-Prot
Match: TERA_DROME (Transitional endoplasmic reticulum ATPase TER94 OS=Drosophila melanogaster GN=TER94 PE=1 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 6.281e-65 Identity = 110/172 (63.95%), Postives = 141/172 (81.98%), Query Frame = 3 Query: 210 STAILDRKKSPNRLVVDEAINDDNSVITMHPNTMEKLQFFRGDTVLVKGKKRKDTVCVVLSDELCEESKVRVNKVVRSNLRVRLGDVVSVHPCPDVKYGRRVHILPIDDTIEGVTGNLFDAYLKPYFMESYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCVVAPDTEILC 725 +TAIL RK PNRL+V+EA NDDNSV+++ M++LQ FRGDTV++KGK+RK+TVC+VLSD+ C + K+R+N+VVR+NL V L DVVSV CPDVKYG+RV ILPID++ EGVTGNLF+ YLKPYF+E+YRP+ GD F+VR MR +EFKV+ TDP YC+VAP+T I C Sbjct: 10 ATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGKRRKETVCIVLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGKRVRILPIDESTEGVTGNLFEIYLKPYFLEAYRPIHMGDNFIVRAAMRPIEFKVVLTDPEPYCIVAPETVIFC 181 HSP 2 Score: 25.0238 bits (53), Expect = 6.281e-65 Identity = 11/22 (50.00%), Postives = 16/22 (72.73%), Query Frame = 1 Query: 748 EDEERLIEVGHEDGGGGKKAMA 813 E+EE L VG++D GG +K +A Sbjct: 190 EEEESLNAVGYDDIGGCRKQLA 211 HSP 3 Score: 25.0238 bits (53), Expect = 6.281e-65 Identity = 12/22 (54.55%), Postives = 15/22 (68.18%), Query Frame = 2 Query: 863 KPIGGKPPQKESRLMGPPGSGK 928 K IG KPP + + GPPG+GK Sbjct: 228 KAIGVKPP-RGILMYGPPGTGK 248
BLAST of DY260002 vs. ExPASy Swiss-Prot
Match: CDC48_SCHPO (Cell division cycle protein 48 OS=Schizosaccharomyces pombe GN=cdc48 PE=1 SV=2) HSP 1 Score: 241.121 bits (614), Expect = 7.731e-63 Identity = 110/170 (64.71%), Postives = 143/170 (84.12%), Query Frame = 3 Query: 210 STAILDRKKSPNRLVVDEAINDDNSVITMHPNTMEKLQFFRGDTVLVKGKKRKDTVCVVLSDELCEESKVRVNKVVRSNLRVRLGDVVSVHPCPDVKYGRRVHILPIDDTIEGVTGNLFDAYLKPYFMESYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCVVAPDTEI 719 +TAIL +K+ PN LVVD+A NDDNSVIT+ NTME LQ FRGDTV+VKGK+RKDTV +VL+DE E+ R+N+VVR+NLRVRLGD+V+++PCPD+KY R+ +LP+ DT+EG+TG+LFD YLKPYF+E+YRP+RKGDLF+VRG MR VEFKV++ P E+ +V+ DT I Sbjct: 33 ATAILRKKRKPNSLVVDDATNDDNSVITLSSNTMETLQLFRGDTVVVKGKRRKDTVLIVLTDEEMEDGVARINRVVRNNLRVRLGDIVTINPCPDIKYAERISVLPLADTVEGLTGSLFDVYLKPYFVEAYRPIRKGDLFVVRGSMRQVEFKVVDVAPDEFGIVSQDTII 202
BLAST of DY260002 vs. ExPASy Swiss-Prot
Match: CDC48_EMENI (Cell division control protein 48 OS=Emericella nidulans GN=cdc48 PE=1 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 2.750e-60 Identity = 105/170 (61.76%), Postives = 138/170 (81.18%), Query Frame = 3 Query: 210 STAILDRKKSPNRLVVDEAINDDNSVITMHPNTMEKLQFFRGDTVLVKGKKRKDTVCVVLSDELCEESKVRVNKVVRSNLRVRLGDVVSVHPCPDVKYGRRVHILPIDDTIEGVTGNLFDAYLKPYFMESYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCVVAPDTEI 719 STAIL +KK PN L+V +A+NDDNS I++ NTM+ L FRGDTV V+GKKRK+TV +VL+D+ ++ R+N+VVR NLRV+ GD+++VHPCPD+KY +R+ +LPI DT+EG+TG+LFD YL PYF + YRPV++GDLF VRGGMR VEFKV+E DP E+ +VAPDT I Sbjct: 38 STAILKKKKKPNSLIVTDAVNDDNSTISLSNNTMDTLGLFRGDTVTVRGKKRKETVLIVLADDDLDDGSARINRVVRHNLRVKHGDIITVHPCPDIKYAKRIAVLPIADTVEGLTGSLFDVYLAPYFRDGYRPVKQGDLFTVRGGMRQVEFKVVEVDPPEFGIVAPDTII 207
BLAST of DY260002 vs. ExPASy Swiss-Prot
Match: TERA1_CAEEL (Transitional endoplasmic reticulum ATPase homolog 1 OS=Caenorhabditis elegans GN=cdc-48.1 PE=1 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 1.782e-59 Identity = 104/170 (61.18%), Postives = 138/170 (81.18%), Query Frame = 3 Query: 210 STAILDRKKSPNRLVVDEAINDDNSVITMHPNTMEKLQFFRGDTVLVKGKKRKDTVCVVLSDELCEESKVRVNKVVRSNLRVRLGDVVSVHPCPDVKYGRRVHILPIDDTIEGVTGNLFDAYLKPYFMESYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCVVAPDTEI 719 STAIL K PNRL+VD++ DDNSVI + M++L FRGD V++KGKKRK++V +++SDE C KVR+N+VVR+NLR+RLGDVVS+ P P++ YG R+H+LPIDDTIEG+TGNLFD +LKPYF+E+YRP+ KGD+F V+ MR+VEFKV+ET+P C+V+PDT I Sbjct: 19 STAILKDKVKPNRLIVDQSEQDDNSVIAVSQAKMDELGLFRGDAVILKGKKRKESVAIIVSDESCPNEKVRMNRVVRNNLRIRLGDVVSITPAPNLSYGTRIHVLPIDDTIEGLTGNLFDVFLKPYFLEAYRPLHKGDIFTVQAAMRTVEFKVVETEPAPACIVSPDTMI 188
BLAST of DY260002 vs. ExPASy Swiss-Prot
Match: TERA2_CAEEL (Transitional endoplasmic reticulum ATPase homolog 2 OS=Caenorhabditis elegans GN=cdc-48.2 PE=1 SV=2) HSP 1 Score: 217.238 bits (552), Expect = 7.410e-59 Identity = 100/170 (58.82%), Postives = 137/170 (80.59%), Query Frame = 3 Query: 210 STAILDRKKSPNRLVVDEAINDDNSVITMHPNTMEKLQFFRGDTVLVKGKKRKDTVCVVLSDELCEESKVRVNKVVRSNLRVRLGDVVSVHPCPDVKYGRRVHILPIDDTIEGVTGNLFDAYLKPYFMESYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCVVAPDTEI 719 +TAIL KK PNRL++D++ NDDNS++ + M++L FRGD+V++KGKKR++TV +VL+ + C K+++NKVVR+NLR RLGDVVS+ ++YG+RVH+LPIDDTIEG+TGNLFD +L+PYF ++YRPV KGD+F V+ MR+VEFKV+ETDP C+VAPDT I Sbjct: 19 ATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRETVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVLPIDDTIEGLTGNLFDVFLRPYFTDAYRPVHKGDIFTVQAAMRTVEFKVVETDPAPACIVAPDTVI 187 HSP 2 Score: 27.335 bits (59), Expect = 7.410e-59 Identity = 12/22 (54.55%), Postives = 17/22 (77.27%), Query Frame = 1 Query: 748 EDEERLIEVGHEDGGGGKKAMA 813 E+EE L EVG++D GG +K +A Sbjct: 198 EEEEALNEVGYDDLGGVRKQLA 219 HSP 3 Score: 26.1794 bits (56), Expect = 7.410e-59 Identity = 13/22 (59.09%), Postives = 15/22 (68.18%), Query Frame = 2 Query: 863 KPIGGKPPQKESRLMGPPGSGK 928 K IG KPP + L GPPG+GK Sbjct: 236 KAIGVKPP-RGILLFGPPGTGK 256
BLAST of DY260002 vs. ExPASy Swiss-Prot
Match: CDC48_ENCCU (Cell division control protein 48 OS=Encephalitozoon cuniculi GN=CDC48 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 2.204e-17 Identity = 47/156 (30.13%), Postives = 88/156 (56.41%), Query Frame = 3 Query: 207 YSTAILDRKKSPNRLVVDEAINDDNSV-ITMHPNTMEKLQFFRGDTVLVKGKKRKDTVCVVLSDELCEESKVRVNKVVRSNLRVRLGDVVSVHPCP-DVKYGRRVHILPIDDTIEGVTGNLFDAYLKPYFMESYRPVRKGDLFLVRGGMRSVEFKV 668 +STAIL+ K +V D+ + + + +HP T+ +L+ F D V + GKK+ + + ++ E + + + R NLR+R+ D V ++ D+ +++ LPI DT+E + GN+FD +++P+ ++ P+ G ++ V G+ VEFKV Sbjct: 10 FSTAILESKTKNTLIVCDKDCSKLRTYQVGLHPTTLNELELFESDYVRILGKKKAELIFSTVALESVPPRHIAIVRDGRFNLRIRITDTVKLYRVDKDIPVVSKLNFLPIKDTVENIRGNIFDEFVRPFLDFNFMPLTTGSIYGVTSGLGRVEFKV 165 The following BLAST results are available for this feature:
BLAST of DY260002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260002 ID=DY260002; Name=DY260002; organism=Citrus clementina; type=EST; length=1024bpback to top |