DY260002
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260002 vs. ExPASy Swiss-Prot
Match: CDC48_SOYBN (Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2 SV=1) HSP 1 Score: 323.168 bits (827), Expect = 6.668e-92 Identity = 150/173 (86.71%), Postives = 166/173 (95.95%), Query Frame = 3 Query: 207 YSTAILDRKKSPNRLVVDEAINDDNSVITMHPNTMEKLQFFRGDTVLVKGKKRKDTVCVVLSDELCEESKVRVNKVVRSNLRVRLGDVVSVHPCPDVKYGRRVHILPIDDTIEGVTGNLFDAYLKPYFMESYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCVVAPDTEILC 725 +STAIL+RKKSPNRLVVDEA+NDDNSV+TMHP TMEKLQ FRGDT+L+KGKKRKDT+C+ L+DE CEE K+R+NKVVRSNLRVRLGDVVSVH CPDVKYG+RVHILPIDDTIEGVTGNLFDA+LKPYF+E+YRPVRKGDLFLVRGGMRSVEFKV+ETDPGEYCVVAPDTEI C Sbjct: 17 FSTAILERKKSPNRLVVDEAVNDDNSVVTMHPQTMEKLQLFRGDTILIKGKKRKDTICIALADENCEEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTIEGVTGNLFDAFLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVVETDPGEYCVVAPDTEIFC 189 HSP 2 Score: 36.965 bits (84), Expect = 6.668e-92 Identity = 33/89 (37.08%), Postives = 42/89 (47.19%), Query Frame = 1 Query: 736 PSNREDEERLIEVGHEDGGGGKKAMAXXXXXXXXXXXXXRLFQTHWGEAXXXXXXXXXXXRVRKKPRIAGAVSQSEPGASFPF*IKGPE 1002 P REDEERL EVG++D GG +K MA +LF++ + K IA AV+ +E GA F F I GPE Sbjct: 193 PLKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPG--SGKTLIARAVA-NETGAFF-FCINGPE 277
BLAST of DY260002 vs. ExPASy Swiss-Prot
Match: CD48E_ARATH (Cell division control protein 48 homolog E OS=Arabidopsis thaliana GN=CDC48E PE=2 SV=2) HSP 1 Score: 320.472 bits (820), Expect = 4.287e-91 Identity = 148/173 (85.55%), Postives = 165/173 (95.38%), Query Frame = 3 Query: 207 YSTAILDRKKSPNRLVVDEAINDDNSVITMHPNTMEKLQFFRGDTVLVKGKKRKDTVCVVLSDELCEESKVRVNKVVRSNLRVRLGDVVSVHPCPDVKYGRRVHILPIDDTIEGVTGNLFDAYLKPYFMESYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCVVAPDTEILC 725 +STAIL+RKKSPNRLVVDEAINDDNSV+++HP TMEKLQ FRGDT+L+KGKKRKDTVC+ L+DE CEE K+R+NKVVRSNLRVRLGDV+SVH CPDVKYG+RVHILP+DDT+EGVTGNLFDAYLKPYF+E+YRPVRKGDLFLVRGGMRSVEFKVIETDP EYCVVAPDTEI C Sbjct: 16 FSTAILERKKSPNRLVVDEAINDDNSVVSLHPTTMEKLQLFRGDTILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVHILPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCVVAPDTEIFC 188 HSP 2 Score: 36.965 bits (84), Expect = 4.287e-91 Identity = 33/89 (37.08%), Postives = 42/89 (47.19%), Query Frame = 1 Query: 736 PSNREDEERLIEVGHEDGGGGKKAMAXXXXXXXXXXXXXRLFQTHWGEAXXXXXXXXXXXRVRKKPRIAGAVSQSEPGASFPF*IKGPE 1002 P REDEERL EVG++D GG +K MA +LF++ + K IA AV+ +E GA F F I GPE Sbjct: 192 PVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPG--SGKTLIARAVA-NETGAFF-FCINGPE 276
BLAST of DY260002 vs. ExPASy Swiss-Prot
Match: CD48A_ARATH (Cell division control protein 48 homolog A OS=Arabidopsis thaliana GN=CDC48A PE=1 SV=1) HSP 1 Score: 319.701 bits (818), Expect = 1.620e-90 Identity = 148/173 (85.55%), Postives = 165/173 (95.38%), Query Frame = 3 Query: 207 YSTAILDRKKSPNRLVVDEAINDDNSVITMHPNTMEKLQFFRGDTVLVKGKKRKDTVCVVLSDELCEESKVRVNKVVRSNLRVRLGDVVSVHPCPDVKYGRRVHILPIDDTIEGVTGNLFDAYLKPYFMESYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCVVAPDTEILC 725 +STAIL+RKKSPNRLVVDEAINDDNSV+++HP TMEKLQ FRGDT+L+KGKKRKDTVC+ L+DE CEE K+R+NKVVRSNLRVRLGDV+SVH CPDVKYG+RVHILP+DDT+EGVTGNLFDAYLKPYF+E+YRPVRKGDLFLVRGGMRSVEFKVIETDP EYCVVAPDTEI C Sbjct: 16 FSTAILERKKSPNRLVVDEAINDDNSVVSLHPATMEKLQLFRGDTILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVHILPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCVVAPDTEIFC 188 HSP 2 Score: 35.8094 bits (81), Expect = 1.620e-90 Identity = 32/89 (35.96%), Postives = 42/89 (47.19%), Query Frame = 1 Query: 736 PSNREDEERLIEVGHEDGGGGKKAMAXXXXXXXXXXXXXRLFQTHWGEAXXXXXXXXXXXRVRKKPRIAGAVSQSEPGASFPF*IKGPE 1002 P REDEERL +VG++D GG +K MA +LF++ + K IA AV+ +E GA F F I GPE Sbjct: 192 PVKREDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPG--SGKTLIARAVA-NETGAFF-FCINGPE 276
BLAST of DY260002 vs. ExPASy Swiss-Prot
Match: CD48D_ARATH (Cell division control protein 48 homolog D OS=Arabidopsis thaliana GN=CDC48D PE=1 SV=1) HSP 1 Score: 310.842 bits (795), Expect = 3.297e-88 Identity = 142/173 (82.08%), Postives = 164/173 (94.80%), Query Frame = 3 Query: 207 YSTAILDRKKSPNRLVVDEAINDDNSVITMHPNTMEKLQFFRGDTVLVKGKKRKDTVCVVLSDELCEESKVRVNKVVRSNLRVRLGDVVSVHPCPDVKYGRRVHILPIDDTIEGVTGNLFDAYLKPYFMESYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCVVAPDTEILC 725 +STAIL++KK+ NRLVVDEAINDDNSV+++HP+TMEKLQ FRGDT+L+KGKKRKDTVC+ L+DE C+E K+R+NKVVRSNLRVRLGDV+SVH CPDVKYG RVHILP+DDTIEGV+GN+FDAYLKPYF+E+YRPVRKGDLFLVRGGMRS+EFKVIETDP EYCVVAPDTEI C Sbjct: 17 FSTAILEKKKAANRLVVDEAINDDNSVVSLHPDTMEKLQLFRGDTILIKGKKRKDTVCIALADETCDEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGNRVHILPLDDTIEGVSGNIFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSIEFKVIETDPAEYCVVAPDTEIFC 189 HSP 2 Score: 36.965 bits (84), Expect = 3.297e-88 Identity = 33/89 (37.08%), Postives = 42/89 (47.19%), Query Frame = 1 Query: 736 PSNREDEERLIEVGHEDGGGGKKAMAXXXXXXXXXXXXXRLFQTHWGEAXXXXXXXXXXXRVRKKPRIAGAVSQSEPGASFPF*IKGPE 1002 P REDEERL EVG++D GG +K MA +LF++ + K IA AV+ +E GA F F I GPE Sbjct: 193 PIKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPG--SGKTLIARAVA-NETGAFF-FCINGPE 277
BLAST of DY260002 vs. ExPASy Swiss-Prot
Match: CDC48_CAPAN (Cell division cycle protein 48 homolog OS=Capsicum annuum GN=CAFP PE=2 SV=1) HSP 1 Score: 304.679 bits (779), Expect = 2.318e-86 Identity = 142/173 (82.08%), Postives = 162/173 (93.64%), Query Frame = 3 Query: 207 YSTAILDRKKSPNRLVVDEAINDDNSVITMHPNTMEKLQFFRGDTVLVKGKKRKDTVCVVLSDELCEESKVRVNKVVRSNLRVRLGDVVSVHPCPDVKYGRRVHILPIDDTIEGVTGNLFDAYLKPYFMESYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCVVAPDTEILC 725 +STAIL+RKK+ NRLVVDEA+NDDNSV+ +HP TMEKLQ FRGDT+L+KGKKRKDTV + L+DE C+E K+R+NKVVRSNLRVRLGDVVSVH CPDVKYG+RVHILPIDDTIEG+TG+LFDA+LKPYF+E+YRP+RKGD FLVRGGMRSVEFKVIETDPGEYCVVAPDTEI C Sbjct: 17 FSTAILERKKAANRLVVDEAVNDDNSVVALHPATMEKLQLFRGDTILIKGKKRKDTVVIALADETCDEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTIEGLTGDLFDAFLKPYFLEAYRPLRKGDNFLVRGGMRSVEFKVIETDPGEYCVVAPDTEIFC 189 HSP 2 Score: 36.965 bits (84), Expect = 2.318e-86 Identity = 33/89 (37.08%), Postives = 42/89 (47.19%), Query Frame = 1 Query: 736 PSNREDEERLIEVGHEDGGGGKKAMAXXXXXXXXXXXXXRLFQTHWGEAXXXXXXXXXXXRVRKKPRIAGAVSQSEPGASFPF*IKGPE 1002 P REDEERL EVG++D GG +K MA +LF++ + K IA AV+ +E GA F F I GPE Sbjct: 193 PVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPG--SGKTLIARAVA-NETGAFF-FCINGPE 277
BLAST of DY260002 vs. ExPASy Swiss-Prot
Match: TERA_DANRE (Transitional endoplasmic reticulum ATPase OS=Danio rerio GN=vcp PE=1 SV=1) HSP 1 Score: 277.715 bits (709), Expect = 4.343e-77 Identity = 122/172 (70.93%), Postives = 155/172 (90.12%), Query Frame = 3 Query: 210 STAILDRKKSPNRLVVDEAINDDNSVITMHPNTMEKLQFFRGDTVLVKGKKRKDTVCVVLSDELCEESKVRVNKVVRSNLRVRLGDVVSVHPCPDVKYGRRVHILPIDDTIEGVTGNLFDAYLKPYFMESYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCVVAPDTEILC 725 STAIL +K PNRL+VDE+IN+DNSV+++ M++LQ FRGDTVL+KGKKR++TVC+VLSD+ C + KVR+N+VVR+NLRVRLGDV+S+ PCPDVKYG+R+H+LPIDDT+EG+TGNLF+ YLKPYF+E+YRP+RKGD+FLVRGGMR+VEFKV+ETDP YC+VAPDT I C Sbjct: 13 STAILKQKNRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLLKGKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHC 184 HSP 2 Score: 28.4906 bits (62), Expect = 4.343e-77 Identity = 15/27 (55.56%), Postives = 19/27 (70.37%), Query Frame = 1 Query: 736 PSNREDEER-LIEVGHEDGGGGKKAMA 813 P REDEE L EVG++D GG +K +A Sbjct: 188 PIKREDEEESLNEVGYDDIGGVRKQLA 214 HSP 3 Score: 25.7942 bits (55), Expect = 4.343e-77 Identity = 13/22 (59.09%), Postives = 15/22 (68.18%), Query Frame = 2 Query: 863 KPIGGKPPQKESRLMGPPGSGK 928 K IG KPP + L GPPG+GK Sbjct: 231 KAIGVKPP-RGILLYGPPGTGK 251
BLAST of DY260002 vs. ExPASy Swiss-Prot
Match: TERA_RAT (Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus GN=Vcp PE=1 SV=3) HSP 1 Score: 276.944 bits (707), Expect = 1.271e-73 Identity = 143/268 (53.36%), Postives = 181/268 (67.54%), Query Frame = 3 Query: 210 STAILDRKKSPNRLVVDEAINDDNSVITMHPNTMEKLQFFRGDTVLVKGKKRKDTVCVVLSDELCEESKVRVNKVVRSNLRVRLGDVVSVHPCPDVKYGRRVHILPIDDTIEGVTGNLFDAYLKPYFMESYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCVVAPDTEILCXXXXXXXXXXXXIN*SRP*RWWGW*KSNGSNPWA*KTS-----P*TPPAFPNPLGGSPPKRNPALWAPPGPEKTPDCRGRFPKRTGGLFSFLN*GP 998 STAIL +K PNRL+VDEAIN+DNSV+++ M++LQ FRGDTVL+KGKKR++ VC+VLSD+ C + K+R+N+VVR+NLRVRLGDV+S+ PCPDVKYG+R+H+LPIDDT+EG+TGNLF+ YLKPYF+E+YRP+RKGD+FLVRGGMR+VEFKV+ETDP YC+VAPDT I C G+ G + P PA +G PP R L+ PPG KT R TG F +N GP Sbjct: 13 STAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDE-----EESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPP-RGILLYGPPGTGKTLIARA-VANETGAFFFLIN-GP 272
BLAST of DY260002 vs. ExPASy Swiss-Prot
Match: TERA_MOUSE (Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp PE=1 SV=4) HSP 1 Score: 276.944 bits (707), Expect = 1.271e-73 Identity = 143/268 (53.36%), Postives = 181/268 (67.54%), Query Frame = 3 Query: 210 STAILDRKKSPNRLVVDEAINDDNSVITMHPNTMEKLQFFRGDTVLVKGKKRKDTVCVVLSDELCEESKVRVNKVVRSNLRVRLGDVVSVHPCPDVKYGRRVHILPIDDTIEGVTGNLFDAYLKPYFMESYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCVVAPDTEILCXXXXXXXXXXXXIN*SRP*RWWGW*KSNGSNPWA*KTS-----P*TPPAFPNPLGGSPPKRNPALWAPPGPEKTPDCRGRFPKRTGGLFSFLN*GP 998 STAIL +K PNRL+VDEAIN+DNSV+++ M++LQ FRGDTVL+KGKKR++ VC+VLSD+ C + K+R+N+VVR+NLRVRLGDV+S+ PCPDVKYG+R+H+LPIDDT+EG+TGNLF+ YLKPYF+E+YRP+RKGD+FLVRGGMR+VEFKV+ETDP YC+VAPDT I C G+ G + P PA +G PP R L+ PPG KT R TG F +N GP Sbjct: 13 STAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDE-----EESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPP-RGILLYGPPGTGKTLIARA-VANETGAFFFLIN-GP 272
BLAST of DY260002 vs. ExPASy Swiss-Prot
Match: TERA_HUMAN (Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP PE=1 SV=4) HSP 1 Score: 276.944 bits (707), Expect = 1.271e-73 Identity = 143/268 (53.36%), Postives = 181/268 (67.54%), Query Frame = 3 Query: 210 STAILDRKKSPNRLVVDEAINDDNSVITMHPNTMEKLQFFRGDTVLVKGKKRKDTVCVVLSDELCEESKVRVNKVVRSNLRVRLGDVVSVHPCPDVKYGRRVHILPIDDTIEGVTGNLFDAYLKPYFMESYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCVVAPDTEILCXXXXXXXXXXXXIN*SRP*RWWGW*KSNGSNPWA*KTS-----P*TPPAFPNPLGGSPPKRNPALWAPPGPEKTPDCRGRFPKRTGGLFSFLN*GP 998 STAIL +K PNRL+VDEAIN+DNSV+++ M++LQ FRGDTVL+KGKKR++ VC+VLSD+ C + K+R+N+VVR+NLRVRLGDV+S+ PCPDVKYG+R+H+LPIDDT+EG+TGNLF+ YLKPYF+E+YRP+RKGD+FLVRGGMR+VEFKV+ETDP YC+VAPDT I C G+ G + P PA +G PP R L+ PPG KT R TG F +N GP Sbjct: 13 STAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDE-----EESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPP-RGILLYGPPGTGKTLIARA-VANETGAFFFLIN-GP 272
BLAST of DY260002 vs. ExPASy Swiss-Prot
Match: TERA_XENTR (Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis GN=vcp PE=2 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 2.832e-73 Identity = 142/268 (52.99%), Postives = 181/268 (67.54%), Query Frame = 3 Query: 210 STAILDRKKSPNRLVVDEAINDDNSVITMHPNTMEKLQFFRGDTVLVKGKKRKDTVCVVLSDELCEESKVRVNKVVRSNLRVRLGDVVSVHPCPDVKYGRRVHILPIDDTIEGVTGNLFDAYLKPYFMESYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCVVAPDTEILCXXXXXXXXXXXXIN*SRP*RWWGW*KSNGSNPWA*KTS-----P*TPPAFPNPLGGSPPKRNPALWAPPGPEKTPDCRGRFPKRTGGLFSFLN*GP 998 STAIL +K PNRL+VDE+IN+DNSV+++ M++LQ FRGDTVL+KGKKR++ VC+VLSD+ C + K+R+N+VVR+NLRVRLGDV+S+ PCPDVKYG+R+H+LPIDDT+EG+TGNLF+ YLKPYF+E+YRP+RKGD+FLVRGGMR+VEFKV+ETDP YC+VAPDT I C G+ G + P PA +G PP R L+ PPG KT R TG F +N GP Sbjct: 13 STAILKQKSRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDE-----EESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPP-RGILLYGPPGTGKTLIARA-VANETGAFFFLIN-GP 272 The following BLAST results are available for this feature:
BLAST of DY260002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260002 ID=DY260002; Name=DY260002; organism=Citrus clementina; type=EST; length=1024bpback to top |