DY260188
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260188 vs. ExPASy Swiss-Prot
Match: RLA0L_HUMAN (60S acidic ribosomal protein P0-like OS=Homo sapiens PE=1 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 2.354e-35 Identity = 81/173 (46.82%), Postives = 105/173 (60.69%), Query Frame = 1 Query: 178 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRHTGLDPSQTPFLQVLNIPTKINQGTVEITTPADLIRKGDKAGSS*GT 696 + +A K Y K+ QLL++Y + + ADNVGS Q+Q IR LRG VVLMGKNTMM++ IR H E N A L+P + GNVG +FTK DL A AR G +AP +V VP ++TGL P +T F Q L I TKI++GT+EI + LI+ GDK G+S T Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKVVVLMGKNTMMRKAIRGHLEN--NPALEKLLPHIWGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEAT 173
BLAST of DY260188 vs. ExPASy Swiss-Prot
Match: RLA0_NEUCR (60S acidic ribosomal protein P0 OS=Neurospora crassa GN=crpp0 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.993e-34 Identity = 75/170 (44.12%), Postives = 102/170 (60.00%), Query Frame = 1 Query: 187 KAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRHTGLDPSQTPFLQVLNIPTKINQGTVEITTPADLIRKGDKAGSS*GT 696 K+ K Y KL LLE+Y I + + DNV S Q+ IR+ LRG++VVLMGKNTM++R ++ T + L+P ++GNVG +FT GDL APAR G +AP DV +P +TG++P +T F Q L +PTKI +GT+EITT L+ G K G S T Sbjct: 4 KSANKAGYFDKLKGLLEDYRSIFIVSVDNVSSQQMHEIRQSLRGEAVVLMGKNTMVRRALKTFVADTPE--YERLLPFVKGNVGFVFTNGDLKEVRDKILANKVAAPARAGAIAPADVWIPAGNTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGAKVGPSEAT 171
BLAST of DY260188 vs. ExPASy Swiss-Prot
Match: RLA0_PODAN (60S acidic ribosomal protein P0 OS=Podospora anserina PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 9.892e-34 Identity = 75/170 (44.12%), Postives = 100/170 (58.82%), Query Frame = 1 Query: 187 KAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRHTGLDPSQTPFLQVLNIPTKINQGTVEITTPADLIRKGDKAGSS*GT 696 K+ K Y KL LLEEY I + + DNV S Q+ IR+ LR VVLMGKNTM++R ++ + + L+P ++GNVG +FT GDL APAR G VAP+DV +P +TG++P +T F Q L +PTKI +GT+EITT L+ G K G S T Sbjct: 4 KSANKAGYFDKLKGLLEEYKSIFIVSVDNVSSQQMHEIRQALRDQGVVLMGKNTMVRRALKTFL--VDSPEYERLLPFVKGNVGFVFTNGDLKEIRDKILANKVAAPARAGAVAPVDVWIPAGNTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGAKVGPSEAT 171
BLAST of DY260188 vs. ExPASy Swiss-Prot
Match: RLA0_PLAF8 (60S acidic ribosomal protein P0 OS=Plasmodium falciparum (isolate 7G8) GN=RPLP0 PE=2 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 1.746e-30 Identity = 70/176 (39.77%), Postives = 109/176 (61.93%), Query Frame = 1 Query: 172 VVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGA-PARVGLVAPIDVVVPPRHTGLDPSQTPFLQVLNIPTKINQGTVEITTPADLIRKGDKAGSS*GT 696 + K SK +KK Y KL L+++Y++IL+ DNVGS+Q+ ++R+ LRG + +LMGKNT ++ ++ + + L+PL++ N+G +F K DL + PAR+G++APIDV +PP TG+DPS T FL+ L I TKI +G +EI LI++G+K +S T Sbjct: 1 MAKLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTRIRTALKKNLQAVPQIE--KLLPLVKLNMGFVFCKDDLSEIRNIILDNKSSSHPARLGVIAPIDVFIPPGPTGMDPSHTSFLESLGISTKIVKGQIEIQEHVHLIKQGEKVTASSAT 174
BLAST of DY260188 vs. ExPASy Swiss-Prot
Match: RLA0_YEAST (60S acidic ribosomal protein P0 OS=Saccharomyces cerevisiae GN=RPP0 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 6.635e-30 Identity = 71/165 (43.03%), Postives = 96/165 (58.18%), Query Frame = 1 Query: 193 EKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRHTGLDPSQTPFLQVLNIPTKINQGTVEITTPADLIRKGDKAGSS 687 EKK Y AKL + LEEY + V DNV S Q+ +R+ LRG +VVLMGKNTM++R IR + F L+P ++G VG +FT L APAR G VAP D+ V +TG++P +T F Q L +PTKI +GT+EI + ++ G+K G S Sbjct: 6 EKKAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIRGFLSDLPD--FEKLLPFVKGYVGFVFTNEPLTEIKNVIVSNRVAAPARAGAVAPEDIWVRAVNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGQS 168
BLAST of DY260188 vs. ExPASy Swiss-Prot
Match: RLA0_SCHPO (60S acidic ribosomal protein P0 OS=Schizosaccharomyces pombe GN=rpp0 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.132e-29 Identity = 70/172 (40.70%), Postives = 96/172 (55.81%), Query Frame = 1 Query: 181 ASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRHTGLDPSQTPFLQVLNIPTKINQGTVEITTPADLIRKGDKAGSS*GT 696 A E K Y KL L E+Y + V DNV S Q+ +R+ LRG + ++MGKNTM++R +R L+P+++GNVG +FT DL APAR +AP+DV VP +TG++P +T F Q L IPTKI +GT+EIT+ L+ K K G S T Sbjct: 2 AISKESKAQYFEKLRSLFEKYNSLFVVNIDNVSSQQMHTVRKQLRGTAELIMGKNTMIRRAMRGIINDMPELE--RLLPVVRGNVGFVFTNADLKEVRETIIANVIAAPARPNAIAPLDVFVPAGNTGMEPGKTSFFQALGIPTKITRGTIEITSDVHLVSKDAKVGPSEAT 171
BLAST of DY260188 vs. ExPASy Swiss-Prot
Match: RLA0_EIMTE (60S acidic ribosomal protein P0 OS=Eimeria tenella PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.530e-26 Identity = 68/169 (40.24%), Postives = 96/169 (56.80%), Query Frame = 1 Query: 190 AEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRHTGLDPSQTPFLQVLNIPTKINQGTVEITTPADLIRKGDKAGSS*GT 696 A K+ Y +L QL+ E+ ++LV +AD+VGS QL IR LRG + VLMGKNT ++ +R ++ L+PL++ NVG IF + D APA+ G+ AP DV +P TG+DP T F Q L I TKI +G +EI LIR+G++ +S T Sbjct: 6 AAKRREYFPRLLQLVLEHPRVLVVSADHVGSKQLAGIRVALRGQATVLMGKNTKIRTALRQQLQQ--QPQLQALLPLVRLNVGFIFCRADPAAVRAVVQQHKVPAPAKQGVTAPTDVFIPAGPTGMDPGSTGFFQALGISTKIVKGQIEIQQAVQLIRRGERVSASAAT 172
BLAST of DY260188 vs. ExPASy Swiss-Prot
Match: RLA0_DICDI (60S acidic ribosomal protein P0 OS=Dictyostelium discoideum GN=rplp0 PE=1 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 2.609e-26 Identity = 67/169 (39.64%), Postives = 98/169 (57.99%), Query Frame = 1 Query: 190 AEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRHTGLDPSQTPFLQVLNIPTKINQGTVEITTPADLIRKGDKAGSS*GT 696 +++K + K +L Y +++VA AD VGS QLQ IR+ +RG VLMGK TM+++ IR A+ LN L+ N +IF K ++ GAPA+ G+ AP DV++P TG++P+QT FLQ L I TKIN+G ++I +I+ G K G+S T Sbjct: 6 SKRKNVFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRKVIRDLADSKPELDALNTY--LKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGVFAPNDVIIPAGPTGMEPTQTSFLQDLKIATKINRGQIDIVNEVHIIKTGQKVGASEAT 172
BLAST of DY260188 vs. ExPASy Swiss-Prot
Match: RLA0_TRYCR (60S acidic ribosomal protein P0 OS=Trypanosoma cruzi PE=2 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 2.885e-25 Identity = 67/178 (37.64%), Postives = 97/178 (54.49%), Query Frame = 1 Query: 184 SKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLI-------PLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRHTGLDPSQTPFLQVLNIPTKINQGTVEITTPADLIRKGDKAGSS*GT 696 S +E K Y+ + L +Y ++L DNV S Q+ ++RR LRG ++MGK T+ K+ + AE +A+ L+ LL GN LIFT ++ APARVG +AP DV+VP +TG++P T F Q LNI TKI +GTVEI + ++ GD+ +S T Sbjct: 3 SVSEAKREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKKIVERRAEDKKASAYDKLLYNTCIEKKLLCGNTALIFTNEEIPVITAVLDKHRVQAPARVGAIAPCDVIVPAGNTGMEPKATSFFQALNIATKIAKGTVEIVSDKKVLSVGDRVDNSTAT 180
BLAST of DY260188 vs. ExPASy Swiss-Prot
Match: RLA0_LEICH (60S acidic ribosomal protein P0 OS=Leishmania chagasi GN=LCP0 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.340e-22 Identity = 65/173 (37.57%), Postives = 89/173 (51.45%), Query Frame = 1 Query: 199 KIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIP-------LLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRHTGLDPSQTPFLQVLNIPTKINQGTVEITTPADLIRKGDKAGSS*GT 696 K Y+ +L L +Y+ +L DNV S Q+ ++RRG RG + +MGK T+ + + A+ + LL GN GLIFT + APARVG + P DVVVP TG++P+QT F Q LNI TKI +G VEI T ++ GDK +S T Sbjct: 8 KREYEERLVDCLTKYSCVLFVGMDNVRSQQVHDVRRGCRGKAEFIMGKKTLQAKIVEKRAQAKDASPEAKPFNDQCEEYNLLSGNTGLIFTNNAVQEITSVLDGHRVKAPARVGAI-PCDVVVPAGSTGMEPTQTSFFQALNIATKIAKGMVEIVTEKKVLSVGDKVDNSTAT 179 The following BLAST results are available for this feature:
BLAST of DY260188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260188 ID=DY260188; Name=DY260188; organism=Citrus clementina; type=EST; length=1023bpback to top |