DY260188
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260188 vs. ExPASy Swiss-Prot
Match: RLA0_SOYBN (60S acidic ribosomal protein P0 OS=Glycine max PE=2 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 6.559e-70 Identity = 135/173 (78.03%), Postives = 146/173 (84.39%), Query Frame = 1 Query: 169 MVVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRHTGLDPSQTPFLQVLNIPTKINQGTVEITTPADLIRKGDKAGSS 687 M K +KAEKKIAYDAKLC L+EEY QILV +DNVGS+QLQNIR+GLRGDSVVLMGKNTMMKR++RMHAEKTGN A+LNLIPLL GNVGLIFTKGDL GAPARVGLVAPIDVVVPP +TGLDPSQT F QVLNIPTKIN+GTVEI TP +LIRKGDK GSS Sbjct: 1 MAPKQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNTMMKRSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSS 173
BLAST of DY260188 vs. ExPASy Swiss-Prot
Match: RLA01_ARATH (60S acidic ribosomal protein P0-1 OS=Arabidopsis thaliana GN=RPP0A PE=2 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 8.566e-70 Identity = 134/173 (77.46%), Postives = 148/173 (85.55%), Query Frame = 1 Query: 169 MVVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRHTGLDPSQTPFLQVLNIPTKINQGTVEITTPADLIRKGDKAGSS 687 M VKA+KAEKKI YD+KLCQLL EY+QILV AADNVGS QLQNIR+GLRGDSVVLMGKNTMMKR++R+HA+KTGN AFL+L+PLLQGNVGLIFTKGDL GAPARVGLVAPIDVVV P +TGLDPSQT F QVLNIPTKIN+GTVEI TP +LI+KGDK GSS Sbjct: 1 MAVKATKAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSS 173
BLAST of DY260188 vs. ExPASy Swiss-Prot
Match: RLA02_ARATH (60S acidic ribosomal protein P0-2 OS=Arabidopsis thaliana GN=RPP0B PE=1 SV=2) HSP 1 Score: 263.848 bits (673), Expect = 1.119e-69 Identity = 133/172 (77.33%), Postives = 148/172 (86.05%), Query Frame = 1 Query: 172 VVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRHTGLDPSQTPFLQVLNIPTKINQGTVEITTPADLIRKGDKAGSS 687 +VKA+KAEKKIAYD KLCQL++EYTQILV AADNVGS QLQNIR+GLRGDSVVLMGKNTMMKR++R+H+E TGNTA LNL+PLLQGNVGLIFTKGDL GAPARVGLVAPIDVVV P +TGLDPSQT F QVLNIPTKIN+GTVEI TP +LI++GDK GSS Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSS 172
BLAST of DY260188 vs. ExPASy Swiss-Prot
Match: RLA03_ARATH (60S acidic ribosomal protein P0-3 OS=Arabidopsis thaliana GN=RPP0C PE=1 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 3.255e-69 Identity = 132/172 (76.74%), Postives = 148/172 (86.05%), Query Frame = 1 Query: 172 VVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRHTGLDPSQTPFLQVLNIPTKINQGTVEITTPADLIRKGDKAGSS 687 +VKA+KAEKKIAYD KLCQL++EYTQILV AADNVGS QLQNIR+GLRGDSVVLMGKNTMMKR++R+H+E +GNTA LNL+PLLQGNVGLIFTKGDL GAPARVGLVAPIDVVV P +TGLDPSQT F QVLNIPTKIN+GTVEI TP +LI++GDK GSS Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSS 172
BLAST of DY260188 vs. ExPASy Swiss-Prot
Match: RLA0_LUPLU (60S acidic ribosomal protein P0 OS=Lupinus luteus PE=2 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 3.599e-68 Identity = 134/173 (77.46%), Postives = 144/173 (83.24%), Query Frame = 1 Query: 169 MVVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRHTGLDPSQTPFLQVLNIPTKINQGTVEITTPADLIRKGDKAGSS 687 M KA+KAEKKI YD KLCQLL+EYTQILV ADNVGS QLQNIR+GLRGDSVVLMGKNTMMKR++R+HAEKTGN AFLNLIPLL GNVGLIFTKG L GAPA VGLVAPIDVVVPP +TGLDPSQT F QVLNIPTKIN+GTVEI TP +LI+KGDK GSS Sbjct: 1 MAPKATKAEKKIVYDGKLCQLLDEYTQILVVNADNVGSKQLQNIRQGLRGDSVVLMGKNTMMKRSVRIHAEKTGNQAFLNLIPLLIGNVGLIFTKGYLKEVSEEVAKYKVGAPACVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSS 173
BLAST of DY260188 vs. ExPASy Swiss-Prot
Match: RLA0_ORYSJ (60S acidic ribosomal protein P0 OS=Oryza sativa subsp. japonica GN=Os08g0130500 PE=1 SV=3) HSP 1 Score: 250.751 bits (639), Expect = 9.801e-66 Identity = 122/173 (70.52%), Postives = 144/173 (83.24%), Query Frame = 1 Query: 169 MVVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRHTGLDPSQTPFLQVLNIPTKINQGTVEITTPADLIRKGDKAGSS 687 M +K +KAEKK+AYD KLCQLL+EYT++L+A ADNVGS+QLQ IR+GLRGDS+VLMGKNT+++R I++HA+ TGN FL L+PLL GNVGLIFTKGDL GAPARVGLVAP+DVVVPP +TGLDPSQT F QVLNIPTKIN+GTVEI TP +LI+KGDK GSS Sbjct: 1 MAIKRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHADNTGNKEFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSS 173
BLAST of DY260188 vs. ExPASy Swiss-Prot
Match: RLA0_MAIZE (60S acidic ribosomal protein P0 OS=Zea mays GN=RP-P0 PE=1 SV=3) HSP 1 Score: 242.276 bits (617), Expect = 3.486e-63 Identity = 122/173 (70.52%), Postives = 142/173 (82.08%), Query Frame = 1 Query: 169 MVVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRHTGLDPSQTPFLQVLNIPTKINQGTVEITTPADLIRKGDKAGSS 687 M +K +KAEKKIAYD KLC LL+EYT++L+A ADNVGS QLQ+IRRGLRGDSVVLMGKNT+++R I+++AEKTGN F L+ LL GNVGLIFTKGDL GAPARVGLVAP+DVVVPP +TGLDPSQT F QVLNIPTKIN+GTVEI TP +LI+KG+K GSS Sbjct: 1 MAIKRTKAEKKIAYDKKLCSLLDEYTKVLIALADNVGSKQLQDIRRGLRGDSVVLMGKNTLIRRCIKVYAEKTGNHTFDPLMDLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSS 173
BLAST of DY260188 vs. ExPASy Swiss-Prot
Match: RLA0_CHERU (60S acidic ribosomal protein P0 OS=Chenopodium rubrum PE=2 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 1.121e-61 Identity = 122/173 (70.52%), Postives = 138/173 (79.77%), Query Frame = 1 Query: 169 MVVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRHTGLDPSQTPFLQVLNIPTKINQGTVEITTPADLIRKGDKAGSS 687 M VK +KAEKKIAYD KLCQLL+EY+Q+L+A+ADNVGS+QLQ IR GLRGDS+VLMGKNTMMKR+IR+HAE TGN N+ L NVGLIFTKGDL GAPAR GLVAPIDVVVPP +TGLDPSQT F QVLNIPTKIN+GTVEI T +LI+KG+K GSS Sbjct: 1 MAVKPTKAEKKIAYDQKLCQLLDEYSQVLIASADNVGSNQLQAIRIGLRGDSIVLMGKNTMMKRSIRLHAENTGNENLRNVEQLFLPNVGLIFTKGDLNQVREEISKYKVGAPARFGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITAVELIKKGEKVGSS 173
BLAST of DY260188 vs. ExPASy Swiss-Prot
Match: RLA0_CERCA (60S acidic ribosomal protein P0 OS=Ceratitis capitata GN=RpLP0 PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 5.987e-39 Identity = 82/175 (46.86%), Postives = 112/175 (64.00%), Query Frame = 1 Query: 172 VVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRHTGLDPSQTPFLQVLNIPTKINQGTVEITTPADLIRKGDKAGSS*GT 696 +V+ +KA K Y K+ +L +EY + + ADNVGS Q+QNIR LRG VVLMGKNTMM++ IR H E N L+P ++GNVG +FTKGDL APAR G +AP+ V++P ++TGL P +T F Q L+IPTKI++GT+EI +++ GDK G+S T Sbjct: 1 MVRENKAAWKAQYFLKVVELFDEYPKCFIVGADNVGSKQMQNIRTSLRGLGVVLMGKNTMMRKAIRGHLEN--NAQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARAGAIAPLPVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEAT 173
BLAST of DY260188 vs. ExPASy Swiss-Prot
Match: RLA0_DROME (60S acidic ribosomal protein P0 OS=Drosophila melanogaster GN=RpLP0 PE=1 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 2.972e-38 Identity = 81/175 (46.29%), Postives = 113/175 (64.57%), Query Frame = 1 Query: 172 VVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRHTGLDPSQTPFLQVLNIPTKINQGTVEITTPADLIRKGDKAGSS*GT 696 +V+ +KA K Y K+ +L +E+ + + ADNVGS Q+QNIR LRG +VVLMGKNTMM++ IR H E N L+P ++GNVG +FTKGDL APAR G +AP+ V++P ++TGL P +T F Q L+IPTKI++GT+EI +++ GDK G+S T Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKAIRGHLEN--NPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEAT 173 The following BLAST results are available for this feature:
BLAST of DY260188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260188 ID=DY260188; Name=DY260188; organism=Citrus clementina; type=EST; length=1023bpback to top |