DY260188
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260188 vs. ExPASy Swiss-Prot
Match: RLA0_LEIIN (60S acidic ribosomal protein P0 OS=Leishmania infantum GN=LIPO-A PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 8.130e-20 Identity = 59/173 (34.10%), Postives = 85/173 (49.13%), Query Frame = 1 Query: 199 KIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIP-------LLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRHTGLDPSQTPFLQVLNIPTKINQGTVEITTPADLIRKGDKAGSS*GT 696 K Y+ +L L +Y+ +L DNV S Q+ ++ R LR + +MGK T+ + + A+ + LL GN GLIFT + ARVG ++P DV+V TG++P+QT F Q LNI TKI +G VEI T ++ GDK +S T Sbjct: 8 KREYEERLVDCLTKYSCVLFVGMDNVRSQQVHDVGRALRAKAEFMMGKKTLQGKIVEKRAQAKDASPEAKHFNDQCEEYNLLSGNTGLIFTNNAVQEITSVLDAHRVKRAARVGAISPCDVIVAAGSTGMEPTQTSFFQALNIATKIAKGMVEIVTEKKVLSVGDKVDNSTAT 180
BLAST of DY260188 vs. ExPASy Swiss-Prot
Match: RLA0_ENCCU (60S acidic ribosomal protein P0 OS=Encephalitozoon cuniculi GN=RPP0 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 4.461e-18 Identity = 59/173 (34.10%), Postives = 93/173 (53.76%), Query Frame = 1 Query: 169 MVVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRHTGLDPSQTPFLQVLNIPTKINQGTVEITTPADLIRKGDKAGSS 687 M K +K K++ Y+ + +L E Y++ + +NV S QL++I+R G++ +LMGKN+ ++R I G + L++G+V +F KG+ A A+VG VA DV V TG+ P +T + Q L I TKI +G VEI +P ++ +GDK G S Sbjct: 25 MTRKDAKERKELTYE-RARKLFETYSRFALVKIENVVSTQLKDIKRQWGGNAELLMGKNSAIRRAIA----DLGKPELSGVYDLVKGDVCFVFFKGNARDIKKAIDENVREACAKVGNVAQRDVWVESCITGMTPDKTSYFQALGIATKITKGKVEIISPYKVLSEGDKVGPS 192
BLAST of DY260188 vs. ExPASy Swiss-Prot
Match: RLA0_HALSA (Acidic ribosomal protein P0 homolog OS=Halobacterium salinarium GN=rplP0 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 3.308e-13 Identity = 49/156 (31.41%), Postives = 79/156 (50.64%), Query Frame = 1 Query: 214 AKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRHTGLDPSQTPF---LQVLNIPTKINQGTVEITTPADLIRKGD 672 A+L LLE Y + V + S QLQ++RRGL G + + M +NT++ R + E+ G+ L ++G VGL+ T + AP G VAP D+VVP TG+DP PF LQ + +I +G++++ + + +G+ Sbjct: 21 AELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVRAL----EEAGD-GLDTLTEYVEGEVGLVATNDNPFGLYQQLENSKTPAPINAGEVAPNDIVVPEGDTGIDPG--PFVGELQTIGANARIQEGSIQVLDDSVVTEEGE 169
BLAST of DY260188 vs. ExPASy Swiss-Prot
Match: RLA0_HALS3 (Acidic ribosomal protein P0 homolog OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rplP0 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 3.308e-13 Identity = 49/156 (31.41%), Postives = 79/156 (50.64%), Query Frame = 1 Query: 214 AKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRHTGLDPSQTPF---LQVLNIPTKINQGTVEITTPADLIRKGD 672 A+L LLE Y + V + S QLQ++RRGL G + + M +NT++ R + E+ G+ L ++G VGL+ T + AP G VAP D+VVP TG+DP PF LQ + +I +G++++ + + +G+ Sbjct: 21 AELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVRAL----EEAGD-GLDTLTEYVEGEVGLVATNDNPFGLYQQLENSKTPAPINAGEVAPNDIVVPEGDTGIDPG--PFVGELQTIGANARIQEGSIQVLDDSVVTEEGE 169
BLAST of DY260188 vs. ExPASy Swiss-Prot
Match: RLA0_THESM (Acidic ribosomal protein P0 homolog OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rplP0 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.658e-12 Identity = 48/165 (29.09%), Postives = 82/165 (49.70%), Query Frame = 1 Query: 181 ASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRHTGLDPSQ-TPFLQVLNIPTKINQGTVEITTPADLIRKGD 672 A AE K +L +LL++Y I + +V ++ L +R LR +V+ + +NT+++ ++ A++ ++ LI +QG G++ TK + APA+ G AP DVVVP T L P +Q L IP +I +G V I +++ G+ Sbjct: 2 AHVAEWKKKEVEELTKLLQDYPVIALVDVADVPAYPLSKMRESLRDKAVLRVSRNTLIELALKKAAQELNDSNLEKLIEHIQGGTGILVTKINPFKLYKFLEESKKPAPAKAGAPAPRDVVVPAGPTPLSPGPLVGEMQALGIPARIEKGKVSIQKDTVVLKAGE 166
BLAST of DY260188 vs. ExPASy Swiss-Prot
Match: RLA0_NATPD (Acidic ribosomal protein P0 homolog OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rplP0 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 6.239e-12 Identity = 46/159 (28.93%), Postives = 77/159 (48.43%), Query Frame = 1 Query: 217 KLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRHTGLDPSQTPF---LQVLNIPTKINQGTVEITTPADLIRKGDKAGS 684 +L LE Y + V + S QLQ++RR L G + + + +NT+M+R + + G L+ ++G VGLI T + AP G VAP D+V+P TG+DP PF LQ + +I G++++ + ++ G++ S Sbjct: 21 ELVAFLERYESVGVVDITGIPSRQLQDMRRDLHGTAALRVSRNTLMERALNEGGDGLG-----ELVEHVEGQVGLIGTNDNPFGLYQQLEESKTPAPINAGEVAPNDIVIPEGDTGVDPG--PFVGDLQQVGANARIEGGSIKVVEDSTVLSAGEEVSS 172
BLAST of DY260188 vs. ExPASy Swiss-Prot
Match: RLA0_THEON (Acidic ribosomal protein P0 homolog OS=Thermococcus onnurineus (strain NA1) GN=rplP0 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.064e-11 Identity = 45/165 (27.27%), Postives = 80/165 (48.48%), Query Frame = 1 Query: 181 ASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRHTGLDPSQ-TPFLQVLNIPTKINQGTVEITTPADLIRKGD 672 A AE K +L +++ Y I + NV ++ L +R LRG +++ + +NT+++ I+ A++ G LI +QG G++ T+ + APA+ G+ P DVV+P T + P +Q L IP +I +G V I +++ G+ Sbjct: 2 AHVAEWKKKEVEELTNIIKSYPVIALVDVANVPAYPLSKMREKLRGKALLRVSRNTLIELAIKRAAQELGKPELEKLIDHIQGGAGILATEMNPFKLYKLLEESKTPAPAKPGVPVPRDVVIPAGPTSISPGPLVGEMQALGIPARIEKGKVSIQKDYTVLKAGE 166
BLAST of DY260188 vs. ExPASy Swiss-Prot
Match: RLA0_METVO (Acidic ribosomal protein P0 homolog (Fragment) OS=Methanococcus voltae GN=rplP0 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.390e-11 Identity = 48/154 (31.17%), Postives = 73/154 (47.40%), Query Frame = 1 Query: 220 LCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRHTGLDPSQTPF---LQVLNIPTKINQGTVEITTPADLIRKGD 672 L +LL+ I + V S QLQ IR +R + M +NT+MKR I AE+TGN +F LI ++ LI T+ + AP + G AP D+ + TG+ P PF L+ + +P I +G + I + ++GD Sbjct: 21 LKELLKSGNVIALIDMMEVPSVQLQEIRDTIRDSMTLKMSRNTLMKRAIEEVAEETGNPSFTKLIDCMEKGAALIATEMNPFKLYKTLNESKSPAPIKAGATAPCDIEIKAGSTGMPPG--PFLSELKAVGLPAAIEKGKIGIKEDTIVAKEGD 172
BLAST of DY260188 vs. ExPASy Swiss-Prot
Match: RLA0_HALVO (Acidic ribosomal protein P0 homolog OS=Halobacterium volcanii GN=rplP0 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.815e-11 Identity = 46/156 (29.49%), Postives = 74/156 (47.44%), Query Frame = 1 Query: 217 KLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRHTGLDPSQTPF---LQVLNIPTKINQGTVEITTPADLIRKGDK 675 +L +E Y + V + S QLQ++RR L G + V M +NT++ R + N F L + G V LI T + AP G VAP D+V+P TG+DP PF LQ + +I G++ +T ++++ +G++ Sbjct: 22 ELVDFIESYESVGVVGVAGIPSRQLQSMRRELHGSAAVRMSRNTLVNRAL-----DEVNDGFEELKEYIAGQVALIGTNDNPFALFKELEASKTPAPINAGEVAPNDIVIPEGDTGVDPG--PFVGELQQVGASARIMDGSIMVTEDSNVLSEGEE 170
BLAST of DY260188 vs. ExPASy Swiss-Prot
Match: RLA0_PYRKO (Acidic ribosomal protein P0 homolog OS=Pyrococcus kodakaraensis GN=rplP0 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.898e-11 Identity = 45/165 (27.27%), Postives = 78/165 (47.27%), Query Frame = 1 Query: 181 ASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRHTGLDPSQ-TPFLQVLNIPTKINQGTVEITTPADLIRKGD 672 A AE K +L +++ Y I + V ++ L +R LRG +++ + +NT+++ I+ A++ G LI +QG ++ T+ + APA+ G V P DVV+P T L P +Q L IP +I +G V I +++ G+ Sbjct: 2 AHVAEWKKKEVEELANIIKSYPVIALVDVAGVPAYPLSKMRDKLRGKALLRVSRNTLIELAIKRAAQELGQPELEKLIDHIQGGAAILATEMNPFKLYKLLEESKTPAPAKAGAVVPKDVVIPAGPTSLAPGPLVGEMQALGIPARIEKGKVSIQKDYTVLKAGE 166 The following BLAST results are available for this feature:
BLAST of DY260188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260188 ID=DY260188; Name=DY260188; organism=Citrus clementina; type=EST; length=1023bpback to top |