DY260188
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260188 vs. ExPASy Swiss-Prot
Match: RLA0_METMP (Acidic ribosomal protein P0 homolog OS=Methanococcus maripaludis GN=rplP0 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.898e-11 Identity = 46/154 (29.87%), Postives = 74/154 (48.05%), Query Frame = 1 Query: 220 LCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRHTGLDPSQTPF---LQVLNIPTKINQGTVEITTPADLIRKGD 672 L +LL+ I + V + QLQ IR +R + M +NT+MKR I AE+TGN F L+ + +I T+ + AP + G +AP D+ V TG+ P PF L+ + IP I++G + I ++++G+ Sbjct: 21 LKELLKSSNIIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNTLMKRAIEEVAEETGNPEFAKLVDYMDKGAAIIATEMNPFKLYKTLDESKSPAPVKGGAIAPCDIEVKAGSTGMPPG--PFLSELKAVGIPAAIDKGKIGIKEDKIVVKEGE 172
BLAST of DY260188 vs. ExPASy Swiss-Prot
Match: RLA0_METM5 (Acidic ribosomal protein P0 homolog OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rplP0 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.898e-11 Identity = 45/154 (29.22%), Postives = 75/154 (48.70%), Query Frame = 1 Query: 220 LCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRHTGLDPSQTPF---LQVLNIPTKINQGTVEITTPADLIRKGD 672 L +LL+ + I + V + QLQ IR +R + M +NT+MKR I AE+TGN F L+ + +I T+ + AP + G VAP D+ + TG+ P PF L+ + +P I++G + I ++++G+ Sbjct: 21 LKELLKSSSIIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNTLMKRAIEEVAEETGNPEFAKLVDYMDKGAAIIATEMNPFKLYKTLDESKSPAPVKGGAVAPCDIEIKAGSTGMPPG--PFLSELKAVGLPAAIDKGKIGIKEDTVVVKEGE 172
BLAST of DY260188 vs. ExPASy Swiss-Prot
Match: RLA0_METKA (Acidic ribosomal protein P0 homolog OS=Methanopyrus kandleri GN=rplP0 PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 6.898e-11 Identity = 51/165 (30.91%), Postives = 81/165 (49.09%), Query Frame = 1 Query: 190 AEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRG-DSVVLMGKNTMMKRTIRMHAEKTGNTAFLN-LIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRHTGLDPSQ-TPFLQVLNIPTKINQGTVEITTPADLIRKGDK 675 AE K +L +L++EY + + + + + QLQ IR LR D+++ M +NT+M+ + EK L L+ ++G V IFT D APA+ G +AP D+VVP T +P LQ +P +I G V IT L+++G++ Sbjct: 18 AEWKRREVKELKELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRMSRNTLMRIALE---EKLDERPELEPLLDYIEGPVAFIFTNLDPFKLYKLLEESKASAPAKPGDIAPEDIVVPEGPTPFEPGPIVSELQQAGLPAQIQDGKVVITKDTVLVKEGEE 179 The following BLAST results are available for this feature:
BLAST of DY260188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260188 ID=DY260188; Name=DY260188; organism=Citrus clementina; type=EST; length=1023bpback to top |