DY260224
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260224 vs. ExPASy Swiss-Prot
Match: RS17_SPOFR (40S ribosomal protein S17 OS=Spodoptera frugiperda GN=RpS17 PE=2 SV=3) HSP 1 Score: 152.525 bits (384), Expect = 2.359e-36 Identity = 75/122 (61.48%), Postives = 100/122 (81.97%), Query Frame = 1 Query: 67 MGRVPTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFPTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDISGLVEVEP 432 MGRV TKTVKK+++ +IE+YY+R+TLDF TNK+I EE+AIIP+K LRNKIAGF THLM+R++ VRGIS+KLQEEERERR ++VP+ SA++ D I+VD +T DML L ++I+GL +P Sbjct: 1 MGRVRTKTVKKAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 122
BLAST of DY260224 vs. ExPASy Swiss-Prot
Match: RS17_ANOGA (40S ribosomal protein S17 OS=Anopheles gambiae GN=RpS17 PE=2 SV=3) HSP 1 Score: 150.214 bits (378), Expect = 1.171e-35 Identity = 74/114 (64.91%), Postives = 96/114 (84.21%), Query Frame = 1 Query: 67 MGRVPTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFPTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDI 408 MGRV TKT+KK+S+ +IE+YY+R+T+DF TNK+I+EEVAIIP+K LRNKIAGF THLMKR++ VRGIS+KLQEEERERR ++VPD SA++ D I+VD ET +ML L ++I Sbjct: 1 MGRVRTKTIKKASKVIIEKYYTRLTMDFDTNKRIVEEVAIIPTKPLRNKIAGFVTHLMKRLRHSQVRGISIKLQEEERERRDNYVPDVSALEQDIIEVDPETKEMLKHLDFNNI 114
BLAST of DY260224 vs. ExPASy Swiss-Prot
Match: RS17_DROME (40S ribosomal protein S17 OS=Drosophila melanogaster GN=RpS17 PE=2 SV=2) HSP 1 Score: 149.828 bits (377), Expect = 1.529e-35 Identity = 75/124 (60.48%), Postives = 98/124 (79.03%), Query Frame = 1 Query: 67 MGRVPTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFPTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDISGLVEVEPQS 438 MGRV TKTVKK+++ +IE+YY+R+TLDFHTNK+I EEVAIIP+K LRNKIAG+ THLM R++ VRGIS+KLQEEERERR ++VP SA++ D I+VD +T +ML L +I GL +P + Sbjct: 1 MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNT 124
BLAST of DY260224 vs. ExPASy Swiss-Prot
Match: RS17_NEUCR (40S ribosomal protein S17 OS=Neurospora crassa GN=rps-17 PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.407e-35 Identity = 79/134 (58.96%), Postives = 99/134 (73.88%), Query Frame = 1 Query: 67 MGRVPTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFPTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAI------KTDEIKVDKETLDMLAALGMSDISGLVEVEPQSMIAP 450 MGRV TKTVKKS++ +IERYY ++TLDF TNK+I +E+AII SKRLRNKIAG+ THLMKRIQ+GPVRGIS KLQEEERER+ +VP+ SA+ ++ ++ VD ET D+L LG I V V P + P Sbjct: 1 MGRVRTKTVKKSAKVIIERYYPKLTLDFETNKRICDEIAIIASKRLRNKIAGYTTHLMKRIQRGPVRGISFKLQEEERERKDQYVPEVSALDFTQNSESGQLDVDTETKDLLKHLGFDSIP--VNVIPVTQAQP 132
BLAST of DY260224 vs. ExPASy Swiss-Prot
Match: RS17B_YEAST (40S ribosomal protein S17-B OS=Saccharomyces cerevisiae GN=RPS17B PE=1 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.096e-33 Identity = 72/127 (56.69%), Postives = 95/127 (74.80%), Query Frame = 1 Query: 67 MGRVPTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFPTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDE----IKVDKETLDMLAALGMSDISGLVEVEPQ 435 MGRV TKTVK++S+ +IERYY ++TLDF TNK++ +E+A I SKRLRNKIAG+ THLMKRIQKGPVRGIS KLQEEERER+ +VP+ SA+ + VD +T D++ +LG+ ++ V Q Sbjct: 1 MGRVRTKTVKRASKALIERYYPKLTLDFQTNKRLCDEIATIQSKRLRNKIAGYTTHLMKRIQKGPVRGISFKLQEEERERKDQYVPEVSALDLSRSNGVLNVDNQTSDLVKSLGLKLPLSVINVSAQ 127
BLAST of DY260224 vs. ExPASy Swiss-Prot
Match: RS17A_YEAST (40S ribosomal protein S17-A OS=Saccharomyces cerevisiae GN=RPS17A PE=1 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.096e-33 Identity = 72/127 (56.69%), Postives = 95/127 (74.80%), Query Frame = 1 Query: 67 MGRVPTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFPTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDE----IKVDKETLDMLAALGMSDISGLVEVEPQ 435 MGRV TKTVK++S+ +IERYY ++TLDF TNK++ +E+A I SKRLRNKIAG+ THLMKRIQKGPVRGIS KLQEEERER+ +VP+ SA+ + VD +T D++ +LG+ ++ V Q Sbjct: 1 MGRVRTKTVKRASKALIERYYPKLTLDFQTNKRLCDEIATIQSKRLRNKIAGYTTHLMKRIQKGPVRGISFKLQEEERERKDQYVPEVSALDLSRSNGVLNVDNQTSDLVKSLGLKLPLSVINVSAQ 127
BLAST of DY260224 vs. ExPASy Swiss-Prot
Match: RS17_DICDI (40S ribosomal protein S17 OS=Dictyostelium discoideum GN=rps17 PE=3 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 2.441e-33 Identity = 68/106 (64.15%), Postives = 90/106 (84.91%), Query Frame = 1 Query: 67 MGRVPTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFPTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDML 384 MGRV TKT+K++S+ +IE++Y R+T DF TNK+ +++A IPSKRLRNKIAGF THLM+RI GPVRGIS KLQEEERE+R ++VP ESAIKT+E+K+D++ +ML Sbjct: 1 MGRVRTKTIKRASKLLIEKHYPRLTNDFDTNKRTCDKLAKIPSKRLRNKIAGFCTHLMRRIANGPVRGISYKLQEEEREKRDNYVPQESAIKTNEVKIDRDVEEML 106
BLAST of DY260224 vs. ExPASy Swiss-Prot
Match: RS17_CAEEL (40S ribosomal protein S17 OS=Caenorhabditis elegans GN=rps-17 PE=2 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 3.189e-33 Identity = 72/115 (62.61%), Postives = 92/115 (80.00%), Query Frame = 1 Query: 67 MGRVPTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFPTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDE---IKVDKETLDMLAALGMS 402 M RV TKTVKK+SR +IE+YY+RMT DFH NK++ +EVAII SK LRNKIAG+ THLM+RI++GPVRGIS+KLQEEERERR +++P+ S + + IKVD +T DML A G + Sbjct: 1 MSRVRTKTVKKASRVLIEKYYTRMTNDFHNNKRVCDEVAIIGSKPLRNKIAGYITHLMRRIERGPVRGISIKLQEEERERRDNYMPEISTVDPSQLTSIKVDTDTSDMLKAAGFN 115
BLAST of DY260224 vs. ExPASy Swiss-Prot
Match: RS17_ENCCU (40S ribosomal protein S17 OS=Encephalitozoon cuniculi GN=RPS17 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.942e-18 Identity = 43/110 (39.09%), Postives = 72/110 (65.45%), Query Frame = 1 Query: 67 MGRVPTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFPTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALG 396 MG V K VK+++R + E+Y+ R+ F N ++++VA++ SK+L+N+IAG+ T L K+I KG + +K EEERER+ + +P ES + D ++VD T++M+ G Sbjct: 1 MGCVRNKIVKRAARTIAEKYFQRLDSTFDHNLLVVQDVAVVQSKKLKNEIAGYLTSLYKKILKGTYNKVYIKSHEEERERKENVIPKESMLDVDCVEVDDVTMEMIKRYG 110
BLAST of DY260224 vs. ExPASy Swiss-Prot
Match: RS17E_METJA (30S ribosomal protein S17e OS=Methanocaldococcus jannaschii GN=rps17e PE=3 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.851e-11 Identity = 30/62 (48.39%), Postives = 47/62 (75.81%), Query Frame = 1 Query: 67 MGRVPTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFPTHLMKRIQ 252 MGR+ +K+++ ++I++Y T DF TNK++LEEVA I +KRLRN+IAG+ TH M+++Q Sbjct: 1 MGRIRQTLIKRTAMELIKKYRDLFTTDFETNKRVLEEVAQISTKRLRNRIAGYITHKMRQLQ 62 The following BLAST results are available for this feature:
BLAST of DY260224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260224 ID=DY260224; Name=DY260224; organism=Citrus clementina; type=EST; length=775bpback to top |