DY260224
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260224 vs. ExPASy Swiss-Prot
Match: RS172_ARATH (40S ribosomal protein S17-2 OS=Arabidopsis thaliana GN=RPS17B PE=2 SV=3) HSP 1 Score: 227.254 bits (578), Expect = 7.537e-59 Identity = 116/128 (90.62%), Postives = 121/128 (94.53%), Query Frame = 1 Query: 67 MGRVPTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFPTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDISGLVEVEPQSMIAP 450 MGRV TKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGF THLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETL+MLA+LGMSD SG+ VEPQ +AP Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTSGISAVEPQQAMAP 128
BLAST of DY260224 vs. ExPASy Swiss-Prot
Match: RS173_ARATH (40S ribosomal protein S17-3 OS=Arabidopsis thaliana GN=RPS17C PE=2 SV=3) HSP 1 Score: 225.713 bits (574), Expect = 2.193e-58 Identity = 114/131 (87.02%), Postives = 123/131 (93.89%), Query Frame = 1 Query: 67 MGRVPTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFPTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDISGLVEVEPQSMIAPPVF 459 MGRV TKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGF THLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIK D++KVDKETL+MLA+LGMSDI+G+ +VE Q +AP VF Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKIDDVKVDKETLEMLASLGMSDIAGISQVETQQAMAPAVF 131
BLAST of DY260224 vs. ExPASy Swiss-Prot
Match: RS174_ARATH (40S ribosomal protein S17-4 OS=Arabidopsis thaliana GN=RPS17D PE=2 SV=3) HSP 1 Score: 225.328 bits (573), Expect = 2.864e-58 Identity = 115/128 (89.84%), Postives = 120/128 (93.75%), Query Frame = 1 Query: 67 MGRVPTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFPTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDISGLVEVEPQSMIAP 450 MGRV TKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGF THLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETL+MLA+LGMSD G+ VEPQ +AP Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTPGISAVEPQQAMAP 128
BLAST of DY260224 vs. ExPASy Swiss-Prot
Match: RS171_ARATH (40S ribosomal protein S17-1 OS=Arabidopsis thaliana GN=RPS17A PE=1 SV=3) HSP 1 Score: 224.172 bits (570), Expect = 6.380e-58 Identity = 116/132 (87.88%), Postives = 122/132 (92.42%), Query Frame = 1 Query: 67 MGRVPTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFPTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDISGLVEVEPQSMIAP-PVF 459 MGRV TKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGF THLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETL+MLA+LGMSD G+ V+PQ +AP P F Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTLGISAVDPQQAMAPIPAF 132
BLAST of DY260224 vs. ExPASy Swiss-Prot
Match: RS17_SOLLC (40S ribosomal protein S17 OS=Solanum lycopersicum GN=RPS17 PE=2 SV=3) HSP 1 Score: 219.164 bits (557), Expect = 2.052e-56 Identity = 114/133 (85.71%), Postives = 123/133 (92.48%), Query Frame = 1 Query: 67 MGRVPTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFPTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDISGLVE--VEPQSMIAPPVF 459 MGRV TKTVKKSSRQVIERYYS+MTLDFHTNKKILEEVAIIPSKRLRNKIAGF THLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTD I+VDKETLDML+ALGMSD+ G+V+ EPQ++ A P + Sbjct: 1 MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDLIEVDKETLDMLSALGMSDLPGVVKQAAEPQAVAALPSY 133
BLAST of DY260224 vs. ExPASy Swiss-Prot
Match: RS17B_SCHPO (40S ribosomal protein S17-B OS=Schizosaccharomyces pombe GN=rps17b PE=1 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.292e-38 Identity = 79/118 (66.95%), Postives = 97/118 (82.20%), Query Frame = 1 Query: 67 MGRVPTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFPTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDISGLV 420 MGRV TKT K++SR VIE+YY R+TLDF TNK+I++EVAII SKRLRNKIAG+ THLMKRIQ+GPVRGIS KLQEEERER+ +VP+ S ++ D+I VD++T DML ALG I +V Sbjct: 1 MGRVRTKTTKRASRVVIEKYYPRLTLDFQTNKRIVDEVAIIASKRLRNKIAGYTTHLMKRIQRGPVRGISFKLQEEERERKDQYVPEVSELEKDKINVDQDTKDMLKALGYDSIPTVV 118
BLAST of DY260224 vs. ExPASy Swiss-Prot
Match: RS17_THEPA (40S ribosomal protein S17 OS=Theileria parva GN=RPS17 PE=3 SV=3) HSP 1 Score: 157.918 bits (398), Expect = 5.615e-38 Identity = 74/112 (66.07%), Postives = 97/112 (86.61%), Query Frame = 1 Query: 67 MGRVPTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFPTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMS 402 MGRV TKTVK+++RQ++E+YY ++ LDF NKK+ EEVA+IPSKR+RNK+AGF THLM+RIQKGPVRGISLKLQEEERERRMD++P++S ++ I+VD++T DML L +S Sbjct: 1 MGRVRTKTVKRAARQIVEKYYGKLGLDFQYNKKVAEEVALIPSKRMRNKVAGFITHLMRRIQKGPVRGISLKLQEEERERRMDYIPEKSELEVPVIQVDQDTADMLNFLKIS 112
BLAST of DY260224 vs. ExPASy Swiss-Prot
Match: RS17_THEAN (40S ribosomal protein S17 OS=Theileria annulata GN=RPS17 PE=2 SV=3) HSP 1 Score: 157.918 bits (398), Expect = 5.615e-38 Identity = 74/112 (66.07%), Postives = 97/112 (86.61%), Query Frame = 1 Query: 67 MGRVPTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFPTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMS 402 MGRV TKTVK+++RQ++E+YY ++ LDF NKK+ EEVA+IPSKR+RNK+AGF THLM+RIQKGPVRGISLKLQEEERERRMD++P++S ++ I+VD++T DML L +S Sbjct: 1 MGRVRTKTVKRAARQIVEKYYGKLGLDFQYNKKVAEEVALIPSKRMRNKVAGFITHLMRRIQKGPVRGISLKLQEEERERRMDYIPEKSELEVPVIQVDQDTADMLNFLKIS 112
BLAST of DY260224 vs. ExPASy Swiss-Prot
Match: RS17_BOVIN (40S ribosomal protein S17 OS=Bos taurus GN=RPS17 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 7.334e-38 Identity = 76/122 (62.30%), Postives = 99/122 (81.15%), Query Frame = 1 Query: 67 MGRVPTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFPTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDISGLVEVEP 432 MGRV TKTVKK++R +IE+YY+R+ DFHTNK++ EE+AIIPSK+LRNKIAG+ THLMKRIQ+GPVRGIS+KLQEEERERR ++VP+ SA+ + I+VD +T +ML L +S L +P Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLDNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
BLAST of DY260224 vs. ExPASy Swiss-Prot
Match: RS17_PIG (40S ribosomal protein S17 OS=Sus scrofa GN=RPS17 PE=2 SV=3) HSP 1 Score: 157.147 bits (396), Expect = 9.578e-38 Identity = 76/122 (62.30%), Postives = 99/122 (81.15%), Query Frame = 1 Query: 67 MGRVPTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFPTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDISGLVEVEP 432 MGRV TKTVKK++R +IE+YY+R+ DFHTNK++ EE+AIIPSK+LRNKIAG+ THLMKRIQ+GPVRGIS+KLQEEERERR ++VP+ SA+ + I+VD +T +ML L +S L +P Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122 The following BLAST results are available for this feature:
BLAST of DY260224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260224 ID=DY260224; Name=DY260224; organism=Citrus clementina; type=EST; length=775bpback to top |