DY260224

Overview
NameDY260224
Unique NameDY260224
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length775
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY260224 vs. ExPASy Swiss-Prot
Match: RS17E_META3 (30S ribosomal protein S17e OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps17e PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.981e-11
Identity = 28/61 (45.90%), Postives = 45/61 (73.77%), Query Frame = 1 
Query:   67 MGRVPTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFPTHLMKRI 249
            MGR+    +K++   ++E+Y  R+T DF TNKK+++EVA I +KRLRN++AG+ T  MK++
Sbjct:    1 MGRIRQTFIKRAGEDLVEKYEDRLTTDFETNKKVIDEVAEIATKRLRNRVAGYVTKKMKKV 61
The following BLAST results are available for this feature:
BLAST of DY260224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
RS17E_META39.981e-1145.9030S ribosomal protein S17e OS=Methanococcus aeolic... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YM07FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260224 ID=DY260224; Name=DY260224; organism=Citrus clementina; type=EST; length=775bp
CTCAAGCTCTTCTGCTTCACCGTCTTTGTCTTCTTCAAGACAGCAGCCGC
CGCTTCTTAAACTGAAATGGGTCGTGTTCCTACCAAGACCGTGAAGAAGT
CCTCTCGCCAGGTGATTGAGAGGTACTACTCAAGAATGACACTGGACTTC
CATACCAACAAGAAGATTTTGGAGGAGGTTGCTATCATCCCCTCGAAGAG
GCTGCGTAACAAAATTGCTGGGTTCCCAACCCATTTGATGAAGAGGATTC
AGAAGGGTCCAGTTCGTGGAATCTCCCTTAAATTGCAGGAAGAGGAGCGC
GAACGCCGCATGGACTTTGTGCCTGATGAGTCAGCTATTAAGACTGATGA
AATTAAGGTTGACAAGGAAACCTTGGATATGCTTGCTGCTCTTGGCATGT
CTGACATTTCTGGGCTTGTTGAAGTTGAGCCACAGAGCATGATTGCTCCT
CCAGTTTTTGGTCGGGGTGGTGGCAGGAGGTACTGAGTTAATTGAGGCTT
TGTGGCTCAATCAAGAATGAGAAGTTTAGGTTCTTATTAATCAGTACTTC
TTGTGTTTGTTATGAATGCTTTTGTGACTAGTTTTCTTTACTATTTTAAG
AAGGGTGTTTAGTTAAAACTTGAACTCTGGCATCATACTTAGTTGATTTA
ATGGACTTGTTTTGTCTTTTCCTTTTATTTGTTTTACTGGGACGCAACCT
ACTGAAGTTATAACGCCCATTAGTTTTGGCAAAAAAAAAAAAAAAAAAAA
AAAAAAACCCACCTTTCCTGTACAA
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