DY260239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260239 vs. ExPASy Swiss-Prot
Match: RL5_HELAN (60S ribosomal protein L5 OS=Helianthus annuus GN=RPL5A PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.219e-54 Identity = 91/136 (66.91%), Postives = 110/136 (80.88%), Query Frame = 1 Query: 55 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGHVEATGEDYSVEPAD 462 M FVK K+K YFKR+QVK+KRRREGKTDY AR RLI QDKNKYNTPKYR VVRF+N+DI Q+ + I GD +L AAYAHELP+YG++VGLTNYAAAYCTGLLLAR++L L +D Y G E TGE+++V+P + Sbjct: 1 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYFARKRLIAQDKNKYNTPKYRLVVRFSNRDITCQVAYSRIEGDKILCAAYAHELPQYGVKVGLTNYAAAYCTGLLLARKLLSQLGLDKLYIGSTEVTGEEFNVKPVE 136 HSP 2 Score: 43.5134 bits (101), Expect = 1.219e-54 Identity = 19/31 (61.29%), Postives = 23/31 (74.19%), Query Frame = 3 Query: 525 RVFGAPKGALDGGLDFPHSDKKFAGFSKDGK 617 RVFGA KGA+DGGL+ HS K+F GF + K Sbjct: 158 RVFGAMKGAVDGGLNILHSTKRFPGFDSESK 188
BLAST of DY260239 vs. ExPASy Swiss-Prot
Match: RL5_CAEBR (60S ribosomal protein L5 OS=Caenorhabditis briggsae GN=rpl-5 PE=3 SV=2) HSP 1 Score: 193.741 bits (491), Expect = 4.590e-54 Identity = 95/133 (71.43%), Postives = 108/133 (81.20%), Query Frame = 1 Query: 55 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGHVEATGEDYSVE 453 M VK K+KAYFKR+QVK KRRREGKTDY AR RL QDKNKYNTPKYR +VR TNKDI+AQ+ + I GD V+A+AYAHELPRYGL+ GLTNYAAAY TGLLLARR LK + +D Y+GH E TGEDY+VE Sbjct: 1 MGLVKVIKNKAYFKRYQVKLKRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRLTNKDIVAQLAYSKIEGDVVVASAYAHELPRYGLKAGLTNYAAAYATGLLLARRHLKAIGLDSTYKGHEELTGEDYNVE 133 HSP 2 Score: 40.0466 bits (92), Expect = 4.590e-54 Identity = 15/43 (34.88%), Postives = 27/43 (62.79%), Query Frame = 3 Query: 489 LMLGSSKQPLENRVFGAPKGALDGGLDFPHSDKKFAGFSKDGK 617 L +G ++ +++F KG DGG++ PHS+ +F GF ++ K Sbjct: 145 LDIGLARTTTGSKIFAVMKGVADGGINVPHSESRFFGFDQESK 187
BLAST of DY260239 vs. ExPASy Swiss-Prot
Match: RL5_CAEEL (60S ribosomal protein L5 OS=Caenorhabditis elegans GN=rpl-5 PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.017e-53 Identity = 93/133 (69.92%), Postives = 109/133 (81.95%), Query Frame = 1 Query: 55 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGHVEATGEDYSVE 453 M VK K+KAYFKR+QVK +RRREGKTDY AR RL QDKNKYNTPKYR +VR TNKD++AQ+ + I GD V+A+AY+HELPRYGL+VGLTNYAAAY TGLLLARR LK + +D Y+GH E TGEDY+VE Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDVVAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVE 133 HSP 2 Score: 40.0466 bits (92), Expect = 1.017e-53 Identity = 15/43 (34.88%), Postives = 27/43 (62.79%), Query Frame = 3 Query: 489 LMLGSSKQPLENRVFGAPKGALDGGLDFPHSDKKFAGFSKDGK 617 L +G ++ +++F KG DGG++ PHS+ +F GF ++ K Sbjct: 145 LDIGLARTTTGSKIFAVMKGVADGGINVPHSESRFFGFDQESK 187
BLAST of DY260239 vs. ExPASy Swiss-Prot
Match: RL5_THEPA (60S ribosomal protein L5 OS=Theileria parva GN=RPL5 PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 4.158e-52 Identity = 88/138 (63.77%), Postives = 110/138 (79.71%), Query Frame = 1 Query: 55 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGHVEATGEDYSVEPADTK 468 M F++ K+KAYF+RFQVK++RRREGKTDY AR RL+ QDKNKY++PKYR VVR TNK +I QIVS+ +VGD V A+A + EL YG++VGLTNYAAAYCTGLLLARR+L L++D ++ G VEA GE Y VE D + Sbjct: 1 MTFLRVVKNKAYFRRFQVKFRRRREGKTDYYARRRLVAQDKNKYDSPKYRLVVRLTNKRVICQIVSSTLVGDKVHASADSSELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLKLDSQFVGKVEADGELYHVEEEDNE 138 HSP 2 Score: 47.7506 bits (112), Expect = 4.158e-52 Identity = 21/30 (70.00%), Postives = 24/30 (80.00%), Query Frame = 3 Query: 522 NRVFGAPKGALDGGLDFPHSDKKFAGFSKD 611 NRVFGA KGA DGGL PHS+K+F G+S D Sbjct: 157 NRVFGALKGACDGGLHVPHSEKRFPGYSVD 186
BLAST of DY260239 vs. ExPASy Swiss-Prot
Match: RL5_THEAN (60S ribosomal protein L5 OS=Theileria annulata GN=RPL5 PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 5.421e-52 Identity = 88/138 (63.77%), Postives = 110/138 (79.71%), Query Frame = 1 Query: 55 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGHVEATGEDYSVEPADTK 468 M F++ K+KAYF+RFQVK++RRREGKTDY AR RL+ QDKNKY++PKYR VVR TNK +I QIVS+ +VGD V A+A + EL YG++VGLTNYAAAYCTGLLLARR+L L++D ++ G VEA GE Y VE D + Sbjct: 1 MTFLRVVKNKAYFRRFQVKFRRRREGKTDYYARRRLVAQDKNKYDSPKYRLVVRLTNKRVICQIVSSTLVGDKVHASADSSELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLKLDSQFVGKVEADGELYHVEEDDNE 138 HSP 2 Score: 47.7506 bits (112), Expect = 5.421e-52 Identity = 21/30 (70.00%), Postives = 24/30 (80.00%), Query Frame = 3 Query: 522 NRVFGAPKGALDGGLDFPHSDKKFAGFSKD 611 NRVFGA KGA DGGL PHS+K+F G+S D Sbjct: 157 NRVFGALKGACDGGLHVPHSEKRFPGYSVD 186
BLAST of DY260239 vs. ExPASy Swiss-Prot
Match: RL5_EIMTE (60S ribosomal protein L5 OS=Eimeria tenella GN=RPL5 PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 4.517e-51 Identity = 85/133 (63.91%), Postives = 107/133 (80.45%), Query Frame = 1 Query: 55 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGHVEATGEDYSVE 453 MAFVKA K+KAYFKRFQVKY+RRREGKTDY AR RLI QDKNKYN PKYRFVVR TN ++ Q++ A + GD ++ +A + EL RYG++VGLTNY+AAY TGLLLARR+LK + DE++G + +GE+Y +E Sbjct: 1 MAFVKAIKNKAYFKRFQVKYRRRREGKTDYAARRRLILQDKNKYNAPKYRFVVRVTNSRVLCQVMYATLQGDRLVCSADSQELTRYGIKVGLTNYSAAYATGLLLARRLLKQKGLADEFKGLEKPSGEEYHIE 133 HSP 2 Score: 48.521 bits (114), Expect = 4.517e-51 Identity = 21/29 (72.41%), Postives = 24/29 (82.76%), Query Frame = 3 Query: 522 NRVFGAPKGALDGGLDFPHSDKKFAGFSK 608 NRVFGA KGA DGGL PHS+K+F GF+K Sbjct: 157 NRVFGAMKGACDGGLHIPHSNKRFPGFTK 185
BLAST of DY260239 vs. ExPASy Swiss-Prot
Match: RL5_OIKDI (60S ribosomal protein L5 OS=Oikopleura dioica GN=RPL5 PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.327e-50 Identity = 89/137 (64.96%), Postives = 105/137 (76.64%), Query Frame = 1 Query: 61 FVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGHVEATGEDYSVEPADTKE 471 FV K+KAYFKR+Q K+KRRREGKTDY AR RL QDKNKYNTPKYR VVR TNKDIIAQI A + GD ++ +AYAHELPRYG+ VGLTNY+AAY TGLL+ RRVL+ +D YEG +E G+++ E AD E Sbjct: 13 FVAVLKNKAYFKRYQPKFKRRREGKTDYFARKRLCVQDKNKYNTPKYRLVVRVTNKDIIAQIAYARLQGDVIVTSAYAHELPRYGVSVGLTNYSAAYATGLLIGRRVLQKFGLDSMYEGQIEVDGDEF-YEEADAAE 148 HSP 2 Score: 41.2022 bits (95), Expect = 1.327e-50 Identity = 18/31 (58.06%), Postives = 22/31 (70.97%), Query Frame = 3 Query: 525 RVFGAPKGALDGGLDFPHSDKKFAGFSKDGK 617 R+FG KG D G+D PHS K+F GF+ DGK Sbjct: 168 RIFGVLKGCADAGIDIPHSPKRFPGFA-DGK 197 HSP 3 Score: 22.3274 bits (46), Expect = 1.327e-50 Identity = 9/15 (60.00%), Postives = 11/15 (73.33%), Query Frame = 2 Query: 476 FRAPLDVGLIKTTTG 520 FR LD GL +T+TG Sbjct: 152 FRCYLDTGLARTSTG 166
BLAST of DY260239 vs. ExPASy Swiss-Prot
Match: RL5_NEUCR (60S ribosomal protein L5 OS=Neurospora crassa GN=rpl-5 PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 2.889e-50 Identity = 92/139 (66.19%), Postives = 106/139 (76.26%), Query Frame = 1 Query: 55 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGHVEATGEDYSVEPADTKE 471 MAF K K+ AY+ RFQ KYKRRREGKTDY AR RLI Q KNKYN PKYR VVRFTN+DII QIVS+ I GD V A+AY+HEL YG+E GLTN+AAAY TGLLLARRVLK L +D+ ++G EA GE E A+T + Sbjct: 1 MAFHKLVKNSAYYSRFQTKYKRRREGKTDYYARKRLITQAKNKYNAPKYRLVVRFTNRDIILQIVSSEITGDKVFASAYSHELKAYGIEHGLTNWAAAYATGLLLARRVLKKLGLDETFKGVEEADGEYKLTEAAETDD 139 HSP 2 Score: 40.817 bits (94), Expect = 2.889e-50 Identity = 18/43 (41.86%), Postives = 27/43 (62.79%), Query Frame = 3 Query: 489 LMLGSSKQPLENRVFGAPKGALDGGLDFPHSDKKFAGFSKDGK 617 L +G ++ RVFGA KGA DGG+ PHS+ +F G+ + + Sbjct: 149 LDVGLARTSTGARVFGAMKGASDGGIFIPHSENRFPGYDMESE 191
BLAST of DY260239 vs. ExPASy Swiss-Prot
Match: RL5_DICDI (60S ribosomal protein L5 OS=Dictyostelium discoideum GN=rpl5 PE=1 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 1.087e-49 Identity = 86/138 (62.32%), Postives = 109/138 (78.99%), Query Frame = 1 Query: 55 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGHVEATGEDYSVEPADTK 468 M FVK K+KAY+ R+QV+++RRREGKTDY+ R RLI QDKNKYN+PKYR V R TN D+IAQ+V + IVGD VL AAYAHELPR+G++VGLTNYA+ Y TGLLLARR+L L++ D Y+G + G+ + V+P D K Sbjct: 1 MGFVKVVKTKAYYSRYQVQFRRRREGKTDYQQRHRLITQDKNKYNSPKYRLVARITNTDVIAQVVYSKIVGDFVLCAAYAHELPRFGVKVGLTNYASCYATGLLLARRLLAKLKLADLYKGAEKVDGKVFLVKPVDDK 138 HSP 2 Score: 38.891 bits (89), Expect = 1.087e-49 Identity = 16/44 (36.36%), Postives = 28/44 (63.64%), Query Frame = 3 Query: 489 LMLGSSKQPLENRVFGAPKGALDGGLDFPHSDKKFAGFSKDGKR 620 L +G ++ +VF KGA+DGG+ PH + +FAG++ + K+ Sbjct: 146 LDVGLARTSTGAKVFAVLKGAVDGGIYVPHGETRFAGYNAESKK 189
BLAST of DY260239 vs. ExPASy Swiss-Prot
Match: RL5_LYSTE (60S ribosomal protein L5 OS=Lysiphlebus testaceipes GN=RpL5 PE=2 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 2.359e-48 Identity = 111/232 (47.84%), Postives = 141/232 (60.78%), Query Frame = 1 Query: 55 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGHVEATGEDYSVEPADTKEALPCSP*CWAHQN-NHWKTVCLVLRREH*MVDWTFLIVTRSLPVFP----RTASAGCRRSPQYIYGGHVAALLSTLEGR*PQKLSLSLSEYLQ 735 M FVK K+K YFKRFQVKYKRRREGKTDY AR RL QDK+KYNTPKYR +VR +NKDI QI + I GD ++ AAY+HELP+YG++VGLTNYAAAYCTGLLLARR+LK L++D Y G E G++Y+VE D P + C+ T + VD L + S FP + S Q+I+ H+A + TLE P+ S+Y++ Sbjct: 1 MGFVKVVKNKQYFKRFQVKYKRRREGKTDYYARKRLTVQDKSKYNTPKYRLIVRLSNKDITCQIAYSRIEGDRIVCAAYSHELPKYGIKVGLTNYAAAYCTGLLLARRLLKQLKLDTLYTGTTEVDGDEYNVEEHDDG---PGAFRCYLDTGLMRTTTGARIFGAMKGAVDGG-LNIPHSTKRFPGYDNESKSFNADVHRQHIFAHHIANYMKTLEENEPENFQRQFSQYIK 228 The following BLAST results are available for this feature:
BLAST of DY260239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260239 ID=DY260239; Name=DY260239; organism=Citrus clementina; type=EST; length=1000bpback to top |