DY260239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260239 vs. ExPASy Swiss-Prot
Match: RL5_CUCSA (60S ribosomal protein L5 OS=Cucumis sativus GN=RPL5 PE=2 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 3.871e-67 Identity = 144/232 (62.07%), Postives = 167/232 (71.98%), Query Frame = 1 Query: 55 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGHVEATGEDYSVEPADTKEALPCSP*CWAHQNNHWKTVCLVLRREH*MVDWTFLIVTRSLPVFPRTASAGCRRSPQ----YIYGGHVAALLSTLEGR*PQKLSLSLSEYLQQ 738 MAF KAQK+KAYFKR+QVK+KRRREGKTDYRARIRLINQDKNKYNTPKYRFVVR +NKDI AQI+SA+I GD VLA+AY+HELP+YGLEVGLTNYAAAYCTGLLLARRVLKMLEMD EYEG+VEATGEDYSVEPADT+ + V L+ +D L + S F A G + + YI+GGHVAA + TL P+K SEY+++ Sbjct: 1 MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDITAQIISASIAGDLVLASAYSHELPQYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIRTTTGNRVFGALKG---ALDGG-LDIPHSDKRFAGYAKNGQQLDVEVHRKYIFGGHVAAYMRTLMEDEPEKYQSHFSEYIKK 228
BLAST of DY260239 vs. ExPASy Swiss-Prot
Match: RL52_ARATH (60S ribosomal protein L5-2 OS=Arabidopsis thaliana GN=RPL5B PE=2 SV=3) HSP 1 Score: 244.588 bits (623), Expect = 6.832e-64 Identity = 135/231 (58.44%), Postives = 157/231 (67.97%), Query Frame = 1 Query: 55 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGHVEATGEDYSVEPADTKEALPCSP*CWAHQNNHWKTVCLVLRREH*MVDWTFLIV---TRSLPVFPRTASAGCRRSPQYIYGGHVAALLSTLEGR*PQKLSLSLSEYLQQ 738 M FVK+ KS AYFKR+QVK++RRR+GKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI+AQIVSA+I GD V A+AYAHELP+YGL VGLTNYAAAYCTGLLLARRVLKMLEMDDEYEG+VEATGED+SVEP D++ + V L+ +D I R YIYGGHV+ + L P+KL S Y+++ Sbjct: 1 MVFVKSSKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIVAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKG---ALDGGLDIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKK 228 HSP 2 Score: 73.1738 bits (178), Expect = 2.712e-12 Identity = 49/137 (35.77%), Postives = 74/137 (54.01%), Query Frame = 3 Query: 489 LMLGSSKQPLENRVFGAPKGALDGGLDFPHSDKKFAGFSKDGKRRMPKVPAVYLRWTCRCLTEYLGGKMTPKTITLPFRIPPTKGMMAKGSEAPSNKGPAPLSSQPSPQKISKNPPPTQQQRPNFYKNPTYKENESQ 899 L +G + NRVFGA KGALDGGLD PHSDK+FAGF K+ K+ ++ Y+ L G+ P+ + F KG+ A+ E K A + ++P+ +K K+ P + +R N K TY+E +++ Sbjct: 145 LDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEEMYKKVHAAIRAEPNHKKTEKS-APKEHKRYNL-KKLTYEERKNK 279
BLAST of DY260239 vs. ExPASy Swiss-Prot
Match: RL51_ARATH (60S ribosomal protein L5-1 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=2) HSP 1 Score: 244.202 bits (622), Expect = 8.923e-64 Identity = 135/231 (58.44%), Postives = 157/231 (67.97%), Query Frame = 1 Query: 55 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGHVEATGEDYSVEPADTKEALPCSP*CWAHQNNHWKTVCLVLRREH*MVDWTFLIV---TRSLPVFPRTASAGCRRSPQYIYGGHVAALLSTLEGR*PQKLSLSLSEYLQQ 738 M FVK+ KS AYFKR+QVK++RRR+GKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI+AQIVSA+I GD V A+AYAHELP+YGL VGLTNYAAAYCTGLLLARRVLKMLEMDDEYEG+VEATGED+SVEP D++ + V L+ +D I R YIYGGHV+ + L P+KL S Y+++ Sbjct: 1 MVFVKSTKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIVAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKG---ALDGGLDIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKK 228 HSP 2 Score: 78.1814 bits (191), Expect = 8.430e-14 Identity = 52/137 (37.96%), Postives = 74/137 (54.01%), Query Frame = 3 Query: 489 LMLGSSKQPLENRVFGAPKGALDGGLDFPHSDKKFAGFSKDGKRRMPKVPAVYLRWTCRCLTEYLGGKMTPKTITLPFRIPPTKGMMAKGSEAPSNKGPAPLSSQPSPQKISKNPPPTQQQRPNFYKNPTYKENESQ 899 L +G + NRVFGA KGALDGGLD PHSDK+FAGF K+ K+ ++ Y+ L G+ P+ + F KG+ A+ E K A + + P+P+K K P P Q +R N K TY+E +++ Sbjct: 145 LDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEELYKKVHAAIRADPNPKKTVK-PAPKQHKRYNL-KKLTYEERKNK 279
BLAST of DY260239 vs. ExPASy Swiss-Prot
Match: RL51_ORYSI (60S ribosomal protein L5-1 OS=Oryza sativa subsp. indica GN=RPL5A PE=2 SV=2) HSP 1 Score: 236.113 bits (601), Expect = 2.430e-61 Identity = 134/235 (57.02%), Postives = 158/235 (67.23%), Query Frame = 1 Query: 61 FVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGHVEATGEDYSVEPADTKEALPCSP*CWAHQNNHWKTVCLVLRREH*MVDWTFLIVTRSLPVFPRTASAGCRRSPQ---------YIYGGHVAALLSTLEGR*PQKLSLSLSEYLQQ 738 FVK QK+ AY+KRFQVK+KRRR+GKTDYRARIRL NQDKNKYNTPKYRFVVRFTNKDI AQIV A I GD V+AAAY+HELPRYGLEVGLTNYAAAYCTGLLLARRVLK+ +D EYEG++EATGEDY VEPAD + + V L+ +D L + S F AG ++ + YIYGGHVA + ++ P+K SEYL++ Sbjct: 4 FVKTQKTNAYYKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKG---ALDGG-LDIPHSDKRF-----AGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKK 229 HSP 2 Score: 70.0922 bits (170), Expect = 2.296e-11 Identity = 51/138 (36.96%), Postives = 72/138 (52.17%), Query Frame = 3 Query: 489 LMLGSSKQPLENRVFGAPKGALDGGLDFPHSDKKFAGFSKDGKRRMPKVPAVYLRWTCRCLTEYLG--GKMTPKTITLPFRIPPTKGMMAKGSEAPSNKGPAPLSSQPSPQKISKNPPPTQQQRPNFYKNPTYKENES 896 L +G + NRVFGA KGALDGGLD PHSDK+FAGF KD K+ + Y+ + +Y+ + P+ F KG+ A G EA K A + + P+ K +K P T +R N K TY++ ++ Sbjct: 146 LDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYG--GHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMEALYKKVHAAIRADPTMAKSTKKEPAT-HKRYNL-KKLTYEQRKA 279
BLAST of DY260239 vs. ExPASy Swiss-Prot
Match: RL51_ORYSJ (60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica GN=RPL5A PE=2 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 7.070e-61 Identity = 134/235 (57.02%), Postives = 157/235 (66.81%), Query Frame = 1 Query: 61 FVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGHVEATGEDYSVEPADTKEALPCSP*CWAHQNNHWKTVCLVLRREH*MVDWTFLIVTRSLPVFPRTASAGCRRSPQ---------YIYGGHVAALLSTLEGR*PQKLSLSLSEYLQQ 738 FVK QK+ AY KRFQVK+KRRR+GKTDYRARIRL NQDKNKYNTPKYRFVVRFTNKDI AQIV A I GD V+AAAY+HELPRYGLEVGLTNYAAAYCTGLLLARRVLK+ +D EYEG++EATGEDY VEPAD + + V L+ +D L + S F AG ++ + YIYGGHVA + ++ P+K SEYL++ Sbjct: 4 FVKTQKTNAYHKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKG---ALDGG-LDIPHSDKRF-----AGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKK 229 HSP 2 Score: 70.0922 bits (170), Expect = 2.296e-11 Identity = 51/138 (36.96%), Postives = 72/138 (52.17%), Query Frame = 3 Query: 489 LMLGSSKQPLENRVFGAPKGALDGGLDFPHSDKKFAGFSKDGKRRMPKVPAVYLRWTCRCLTEYLG--GKMTPKTITLPFRIPPTKGMMAKGSEAPSNKGPAPLSSQPSPQKISKNPPPTQQQRPNFYKNPTYKENES 896 L +G + NRVFGA KGALDGGLD PHSDK+FAGF KD K+ + Y+ + +Y+ + P+ F KG+ A G EA K A + + P+ K +K P T +R N K TY++ ++ Sbjct: 146 LDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYG--GHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMEALYKKVHAAIRADPTMAKSTKKEPAT-HKRYNL-KKLTYEQRKA 279
BLAST of DY260239 vs. ExPASy Swiss-Prot
Match: RL5B_XENLA (60S ribosomal protein L5-B OS=Xenopus laevis GN=rpl5-B PE=2 SV=2) HSP 1 Score: 198.364 bits (503), Expect = 1.927e-58 Identity = 94/136 (69.12%), Postives = 111/136 (81.62%), Query Frame = 1 Query: 55 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGHVEATGEDYSVEPAD 462 M FVK K+KAYFKR+QVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DII QI A I GD ++ AAYAHELP+YG++VGLTNYAAAYCTGLLLARR+L +D YEG VE TG++Y+VE D Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNKFGLDKVYEGQVEVTGDEYNVESVD 136 HSP 2 Score: 50.0618 bits (118), Expect = 1.927e-58 Identity = 22/46 (47.83%), Postives = 30/46 (65.22%), Query Frame = 3 Query: 498 GSSKQPLENRVFGAPKGALDGGLDFPHSDKKFAGFSKDGKRRMPKV 635 G ++ N+VFGA KGA+DGGL PHS K+F G+ + K P+V Sbjct: 149 GLTRTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNPEV 194
BLAST of DY260239 vs. ExPASy Swiss-Prot
Match: RL5A_XENLA (60S ribosomal protein L5-A OS=Xenopus laevis GN=rpl5-A PE=2 SV=2) HSP 1 Score: 198.364 bits (503), Expect = 1.927e-58 Identity = 94/136 (69.12%), Postives = 111/136 (81.62%), Query Frame = 1 Query: 55 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGHVEATGEDYSVEPAD 462 M FVK K+KAYFKR+QVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DII QI A I GD ++ AAYAHELP+YG++VGLTNYAAAYCTGLLLARR+L +D YEG VE TG++Y+VE D Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGIKVGLTNYAAAYCTGLLLARRLLNKFGLDKVYEGQVEVTGDEYNVESID 136 HSP 2 Score: 50.0618 bits (118), Expect = 1.927e-58 Identity = 22/46 (47.83%), Postives = 30/46 (65.22%), Query Frame = 3 Query: 498 GSSKQPLENRVFGAPKGALDGGLDFPHSDKKFAGFSKDGKRRMPKV 635 G ++ N+VFGA KGA+DGGL PHS K+F G+ + K P+V Sbjct: 149 GLTRTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNPEV 194
BLAST of DY260239 vs. ExPASy Swiss-Prot
Match: RL5_HUMAN (60S ribosomal protein L5 OS=Homo sapiens GN=RPL5 PE=1 SV=3) HSP 1 Score: 198.749 bits (504), Expect = 5.569e-58 Identity = 95/136 (69.85%), Postives = 111/136 (81.62%), Query Frame = 1 Query: 55 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGHVEATGEDYSVEPAD 462 M FVK K+KAYFKR+QVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DII QI A I GD ++ AAYAHELP+YG++VGLTNYAAAYCTGLLLARR+L MD YEG VE TG++Y+VE D Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESID 136 HSP 2 Score: 48.1358 bits (113), Expect = 5.569e-58 Identity = 23/51 (45.10%), Postives = 30/51 (58.82%), Query Frame = 3 Query: 465 QGGPSVLPLMLGSSKQPLENRVFGAPKGALDGGLDFPHSDKKFAGFSKDGK 617 Q G L G ++ N+VFGA KGA+DGGL PHS K+F G+ + K Sbjct: 138 QPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESK 188
BLAST of DY260239 vs. ExPASy Swiss-Prot
Match: RL5_BOVIN (60S ribosomal protein L5 OS=Bos taurus GN=RPL5 PE=2 SV=3) HSP 1 Score: 198.749 bits (504), Expect = 5.569e-58 Identity = 95/136 (69.85%), Postives = 111/136 (81.62%), Query Frame = 1 Query: 55 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGHVEATGEDYSVEPAD 462 M FVK K+KAYFKR+QVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DII QI A I GD ++ AAYAHELP+YG++VGLTNYAAAYCTGLLLARR+L MD YEG VE TG++Y+VE D Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESID 136 HSP 2 Score: 48.1358 bits (113), Expect = 5.569e-58 Identity = 23/51 (45.10%), Postives = 30/51 (58.82%), Query Frame = 3 Query: 465 QGGPSVLPLMLGSSKQPLENRVFGAPKGALDGGLDFPHSDKKFAGFSKDGK 617 Q G L G ++ N+VFGA KGA+DGGL PHS K+F G+ + K Sbjct: 138 QPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESK 188
BLAST of DY260239 vs. ExPASy Swiss-Prot
Match: RL5_CHICK (60S ribosomal protein L5 OS=Gallus gallus GN=RPL5 PE=2 SV=2) HSP 1 Score: 199.134 bits (505), Expect = 7.260e-58 Identity = 95/138 (68.84%), Postives = 112/138 (81.16%), Query Frame = 1 Query: 55 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGHVEATGEDYSVEPADTK 468 M FVK K+KAYFKR+QVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DII QI A I GD ++ AAYAHELP+YG++VGLTNYAAAYCTGLLLARR+L +D YEG VE TG++Y+VE D K Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNKFGLDKIYEGQVEVTGDEYNVESVDGK 138 HSP 2 Score: 47.3654 bits (111), Expect = 7.260e-58 Identity = 20/40 (50.00%), Postives = 27/40 (67.50%), Query Frame = 3 Query: 498 GSSKQPLENRVFGAPKGALDGGLDFPHSDKKFAGFSKDGK 617 G ++ N+VFGA KGA+DGGL PHS K+F G+ + K Sbjct: 149 GLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESK 188 The following BLAST results are available for this feature:
BLAST of DY260239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260239 ID=DY260239; Name=DY260239; organism=Citrus clementina; type=EST; length=1000bpback to top |