DY260239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260239 vs. ExPASy Swiss-Prot
Match: RL5_ANOGA (60S ribosomal protein L5 OS=Anopheles gambiae GN=RpL5 PE=2 SV=3) HSP 1 Score: 191.43 bits (485), Expect = 6.864e-48 Identity = 110/231 (47.62%), Postives = 140/231 (60.61%), Query Frame = 1 Query: 55 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGHVEATGEDYSVEPADTKEALPCSP*CWAHQN-NHWKTVCLVLRREH*MVDWTFLIVTRSLPVFP----RTASAGCRRSPQYIYGGHVAALLSTLEGR*PQKLSLSLSEYL 732 M FVK K+K YFKR+QV+++RRREGKTDY AR RLI QDKNKYNTPK+R +VR +N+DI QI A I GD ++ AAY+HELPRYG++VGLTNYAAAYCTGLL+ARR+L+ L +D Y G + TGE+Y VEP D P + C+ T V VD L + S+ FP S +I+G HVA + TLE + S+Y+ Sbjct: 1 MGFVKVVKNKQYFKRYQVRFRRRREGKTDYYARKRLIFQDKNKYNTPKFRLIVRLSNRDITCQIAYARIEGDRIVCAAYSHELPRYGVKVGLTNYAAAYCTGLLVARRILQKLRLDTLYAGCTDVTGEEYLVEPVDEG---PAAFRCYLDVGLARTTTGARVFGAMKGAVDGG-LNIPHSVKRFPGYSAENKSFNAEMHRDHIFGLHVANYMRTLEEEDEEAFKRQFSKYI 227
BLAST of DY260239 vs. ExPASy Swiss-Prot
Match: RL5_DUNSA (60S ribosomal protein L5 OS=Dunaliella salina GN=RPL5 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.997e-47 Identity = 107/230 (46.52%), Postives = 141/230 (61.30%), Query Frame = 1 Query: 55 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGHVEATGEDYSVEPA-DTKEALPCSP*CWAHQNNHWKTVCLVLRREH*MVDWTFLIVTRSLPVFPRTASAGCRRS--PQYIYGGHVAALLSTLEGR*PQKLSLSLSEYLQ 735 M +VK K+ YF R+QVKY+RRR+GKTDYRAR+RL+ QDKNKYNT KYR VVRF+NK++ QIV + I GD V+AAAY+ ELP YGL+VGLTNY+AAYC GLL+ARR+L L + D Y+G E GEDY+VEP D + C + + V ++ +D L + + F A +YIYGGHVA T++ P+K S Y++ Sbjct: 1 MGYVKVVKTSPYFSRYQVKYRRRRQGKTDYRARLRLVRQDKNKYNTHKYRLVVRFSNKNVTCQIVYSTIQGDVVMAAAYSKELPNYGLKVGLTNYSAAYCVGLLVARRILTKLNLADTYKGQEEPDGEDYNVEPVEDGPKPFYCLLDTGLKRTSTGSKVFAAMKG---ALDGG-LDIPHNEKRFVGYADKKLDTEVLQKYIYGGHVAEYQETMQEEEPEKYQAHFSSYVE 226
BLAST of DY260239 vs. ExPASy Swiss-Prot
Match: RL5_YEAST (60S ribosomal protein L5 OS=Saccharomyces cerevisiae GN=RPL5 PE=1 SV=3) HSP 1 Score: 170.629 bits (431), Expect = 2.177e-47 Identity = 85/128 (66.41%), Postives = 98/128 (76.56%), Query Frame = 1 Query: 55 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGHVEATGE 438 MAF K KS AY RFQ ++RRREGKTDY R RL+ Q K KYNTPKYR VVRFTNKDII QI+S+ I GD VLAAAY+HELPRYG+ GLTN+AAAY TGLL+ARR L+ L +D+ Y+G E GE Sbjct: 1 MAFQKDAKSSAYSSRFQTPFRRRREGKTDYYQRKRLVTQHKAKYNTPKYRLVVRFTNKDIICQIISSTITGDVVLAAAYSHELPRYGITHGLTNWAAAYATGLLIARRTLQRLGLDETYKGVEEVEGE 128 HSP 2 Score: 40.817 bits (94), Expect = 2.177e-47 Identity = 21/54 (38.89%), Postives = 31/54 (57.41%), Query Frame = 3 Query: 489 LMLGSSKQPLENRVFGAPKGALDGGLDFPHSDKKFAGFSKDGKRRMPKVPAVYL 650 L +G + RVFGA KGA DGGL PHS+ +F G+ + + P++ Y+ Sbjct: 146 LDIGLQRTTTGARVFGALKGASDGGLYVPHSENRFPGWDFETEEIDPELLRSYI 199
BLAST of DY260239 vs. ExPASy Swiss-Prot
Match: RL5_PIG (60S ribosomal protein L5 (Fragment) OS=Sus scrofa GN=RPL5 PE=2 SV=3) HSP 1 Score: 179.489 bits (454), Expect = 2.699e-44 Identity = 87/124 (70.16%), Postives = 100/124 (80.65%), Query Frame = 1 Query: 55 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGHVE 426 M FVK K+KAYFKR+QVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DII QI A I GD ++ AAYAHELP+YG++VGLTNYAAAYCTGLLLARR+L M Y G VE Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMXKIYGGQVE 124
BLAST of DY260239 vs. ExPASy Swiss-Prot
Match: RL5B_SCHPO (60S ribosomal protein L5-B OS=Schizosaccharomyces pombe GN=rpl5b PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 1.044e-43 Identity = 78/128 (60.94%), Postives = 95/128 (74.22%), Query Frame = 1 Query: 55 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGHVEATGE 438 M F+KA KS YF R+Q KY+RRREGKTDY AR RLI Q KNKYN PKYR VVRF+N+ + QIVS+ + GD VLA A++ ELPRYG++ GL N+ AAY TGLL+ARR L + + D+YEG E GE Sbjct: 1 MPFIKAVKSSPYFSRYQTKYRRRREGKTDYYARKRLIAQAKNKYNAPKYRLVVRFSNRFVTCQIVSSRVNGDYVLAHAHSSELPRYGIKWGLANWTAAYATGLLVARRALAKVGLADKYEGVTEPEGE 128 HSP 2 Score: 41.5874 bits (96), Expect = 1.044e-43 Identity = 20/38 (52.63%), Postives = 24/38 (63.16%), Query Frame = 3 Query: 489 LMLGSSKQPLENRVFGAPKGALDGGLDFPHSDKKFAGF 602 L +G + +RVFGA KGA DGGL PHS +F GF Sbjct: 146 LDVGLKRTSTGSRVFGAMKGASDGGLFIPHSPNRFPGF 183
BLAST of DY260239 vs. ExPASy Swiss-Prot
Match: RL5A_SCHPO (60S ribosomal protein L5-A OS=Schizosaccharomyces pombe GN=rpl5a PE=1 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 1.044e-43 Identity = 78/128 (60.94%), Postives = 95/128 (74.22%), Query Frame = 1 Query: 55 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGHVEATGE 438 M F+KA KS YF R+Q KY+RRREGKTDY AR RLI Q KNKYN PKYR VVRF+N+ + QIVS+ + GD VLA A++ ELPRYG++ GL N+ AAY TGLL+ARR L + + D+YEG E GE Sbjct: 1 MPFIKAVKSSPYFSRYQTKYRRRREGKTDYYARKRLIAQAKNKYNAPKYRLVVRFSNRFVTCQIVSSRVNGDYVLAHAHSSELPRYGIKWGLANWTAAYATGLLVARRALAKVGLADKYEGVTEPEGE 128 HSP 2 Score: 41.5874 bits (96), Expect = 1.044e-43 Identity = 20/38 (52.63%), Postives = 24/38 (63.16%), Query Frame = 3 Query: 489 LMLGSSKQPLENRVFGAPKGALDGGLDFPHSDKKFAGF 602 L +G + +RVFGA KGA DGGL PHS +F GF Sbjct: 146 LDVGLKRTSTGSRVFGAMKGASDGGLFIPHSPNRFPGF 183
BLAST of DY260239 vs. ExPASy Swiss-Prot
Match: RL18_METTH (50S ribosomal protein L18P OS=Methanobacterium thermoautotrophicum GN=rpl18p PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.000e-14 Identity = 43/101 (42.57%), Postives = 63/101 (62.38%), Query Frame = 1 Query: 85 AYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLK 387 A+ R+++ ++RRREGKTDYRAR +++ T K R VVR T +IAQI++ + GD L +A++ +L + G G +N AAAY TG L +R LK Sbjct: 2 AHGPRYKLAFRRRREGKTDYRARYKMVE-------TGKSRLVVRITTYHVIAQIINVGMNGDETLVSAHSKQLQKMGWLGGTSNTAAAYLTGYLCGKRALK 95
BLAST of DY260239 vs. ExPASy Swiss-Prot
Match: RL18_METLZ (50S ribosomal protein L18P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rpl18p PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.712e-14 Identity = 46/113 (40.71%), Postives = 62/113 (54.87%), Query Frame = 1 Query: 97 RFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGHVEATG 435 R+ V+++RRREG+TDY R RLI +N R VVR TN+ II Q+++A + GD L + EL +G + L N AAY TG+L A R K YEG + G Sbjct: 6 RYFVQFRRRREGRTDYYQRQRLIVSGRN-------RMVVRKTNRHIIIQLIAAQMDGDYTLVHVNSRELVNFGYKGYLGNTPAAYLTGMLFAVRAQKA-----GYEGGIADIG 106 HSP 2 Score: 29.261 bits (64), Expect = 1.712e-14 Identity = 16/38 (42.11%), Postives = 22/38 (57.89%), Query Frame = 3 Query: 462 YQGGPSVLPLMLGSSKQPLENRVFGAPKGALDGGLDFP 575 Y+GG + + L + S+ RVF A KGA+D G D P Sbjct: 98 YEGGIADIGLQVASTGA----RVFAAIKGAVDAGFDVP 131
BLAST of DY260239 vs. ExPASy Swiss-Prot
Match: RL18_UNCMA (50S ribosomal protein L18P OS=Uncultured methanogenic archaeon RC-I GN=rpl18p PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.214e-14 Identity = 42/92 (45.65%), Postives = 58/92 (63.04%), Query Frame = 1 Query: 97 RFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPR-YGLEVGLTNYAAAYCTGLLL 369 R++V ++RRREGKTDY R++LI + K R VVR T+ +IAQI+ GD VLAAA + EL + +G + N +AAY TGLL+ Sbjct: 6 RYKVAFRRRREGKTDYHQRLKLI-------VSRKPRLVVRRTSSQVIAQILVTRPEGDKVLAAATSAELAKTFGYKGSGKNTSAAYLTGLLI 90 HSP 2 Score: 32.3426 bits (72), Expect = 2.214e-14 Identity = 19/55 (34.55%), Postives = 28/55 (50.91%), Query Frame = 3 Query: 429 YWRGLLCRTR*YQGGPSVLPLMLGSSKQPLENRVFGAPKGALDGGLDFPHSDKKF 593 Y GLL + + G L +G + +RV+ A KGA+D GL+ P S+ F Sbjct: 84 YLTGLLIGYKAQEAGVEEAILDMGLRENRAGSRVYAALKGAVDSGLEVPCSEDVF 138
BLAST of DY260239 vs. ExPASy Swiss-Prot
Match: RL18_METHJ (50S ribosomal protein L18P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rpl18p PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.229e-14 Identity = 46/97 (47.42%), Postives = 61/97 (62.89%), Query Frame = 1 Query: 97 RFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLK 387 R+ V ++RRREG+T+Y AR RL+ K R VVR TN+ II QI++A++ GD AA + EL ++G E L N AAY TG+LLA R LK Sbjct: 6 RYFVAFRRRREGRTNYHARTRLVVATKP-------RMVVRKTNRHIICQIITAHMEGDRTHVAANSSELRKFGYEGSLNNTPAAYLTGMLLAVRALK 95 The following BLAST results are available for this feature:
BLAST of DY260239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260239 ID=DY260239; Name=DY260239; organism=Citrus clementina; type=EST; length=1000bpback to top |