DY260275
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260275 vs. ExPASy Swiss-Prot
Match: RS103_ARATH (40S ribosomal protein S10-3 OS=Arabidopsis thaliana GN=RPS10C PE=2 SV=2) HSP 1 Score: 176.022 bits (445), Expect = 2.929e-43 Identity = 82/97 (84.54%), Postives = 92/97 (94.85%), Query Frame = 2 Query: 23 LIIPEKNRKEIRQYLFQEGVCYAKKDYNLAKPPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKP 313 +II E NRKEI +YLF+EGVC+AKKD+NLAK P IDVPNLQVIKLMQSFKS+EYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKKSAKP Sbjct: 1 MIISEANRKEICKYLFKEGVCFAKKDFNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKP 97
BLAST of DY260275 vs. ExPASy Swiss-Prot
Match: RS10_ORYSJ (40S ribosomal protein S10 OS=Oryza sativa subsp. japonica GN=RPS10 PE=2 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 1.113e-42 Identity = 82/97 (84.54%), Postives = 90/97 (92.78%), Query Frame = 2 Query: 23 LIIPEKNRKEIRQYLFQEGVCYAKKDYNLAKPPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKP 313 +IIP+KNR EI +YLFQEGV YAKKDYNLAK P+IDVPNLQVIKLMQSFKS+EYVRETF+W +YYWYLTNDGIE LR YLNLPSEIVPATLKKSA+P Sbjct: 1 MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFSWQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARP 97
BLAST of DY260275 vs. ExPASy Swiss-Prot
Match: RS101_ARATH (40S ribosomal protein S10-1 OS=Arabidopsis thaliana GN=RPS10A PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.899e-42 Identity = 80/97 (82.47%), Postives = 91/97 (93.81%), Query Frame = 2 Query: 23 LIIPEKNRKEIRQYLFQEGVCYAKKDYNLAKPPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKP 313 +II E NR+EI +YLF+EGVC+AKKD+NL K P IDVPNLQVIKLMQSFKS+EYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKKSAKP Sbjct: 1 MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKP 97
BLAST of DY260275 vs. ExPASy Swiss-Prot
Match: RS102_ARATH (40S ribosomal protein S10-2 OS=Arabidopsis thaliana GN=RPS10B PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 3.705e-38 Identity = 76/98 (77.55%), Postives = 88/98 (89.80%), Query Frame = 2 Query: 23 LIIPEKNRKEIRQYLFQEGVCYAKKDYNLAKPPEID-VPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKP 313 +II E NR+EI +YLF+EGV +AKKD+NL + P I+ VPNLQVIKLMQSFKS+EYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKK KP Sbjct: 1 MIISETNRREISKYLFKEGVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKP 98
BLAST of DY260275 vs. ExPASy Swiss-Prot
Match: RS10_SPOFR (40S ribosomal protein S10 OS=Spodoptera frugiperda GN=RpS10 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 6.335e-30 Identity = 60/97 (61.86%), Postives = 80/97 (82.47%), Query Frame = 2 Query: 23 LIIPEKNRKEIRQYLFQEGVCYAKKDYNLAKPPEID-VPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAK 310 +++P++NR I +YLF+EGV AKKDY+ K P+++ +PNLQVIK MQS KSR YV+E FAW H+YWYLTN+GIE+LR +L+LP EIVPATLK+S + Sbjct: 1 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVR 97
BLAST of DY260275 vs. ExPASy Swiss-Prot
Match: RS10_LUMRU (40S ribosomal protein S10 OS=Lumbricus rubellus GN=RPS10 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.560e-28 Identity = 58/97 (59.79%), Postives = 75/97 (77.32%), Query Frame = 2 Query: 23 LIIPEKNRKEIRQYLFQEGVCYAKKDYNLAKPPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKP 313 +++ +KNR I +YLF+EGV AKKD++L K EIDVPNL VI+ MQS SR YV+E F W HYYWYL N+GI++LR +L+LP EIVPATLK+ +P Sbjct: 1 MLMSKKNRVMIYEYLFKEGVLVAKKDFHLPKHGEIDVPNLHVIRAMQSLVSRGYVKEQFCWRHYYWYLQNEGIQYLRDFLHLPPEIVPATLKRQTRP 97
BLAST of DY260275 vs. ExPASy Swiss-Prot
Match: RS10_RAT (40S ribosomal protein S10 OS=Rattus norvegicus GN=Rps10 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.725e-27 Identity = 58/97 (59.79%), Postives = 77/97 (79.38%), Query Frame = 2 Query: 23 LIIPEKNRKEIRQYLFQEGVCYAKKDYNLAKPPEI---DVPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKS 304 +++P+KNR I + LF+EGV AKKD ++ K PE+ +VPNL V+K MQS KSR YV+E FAW H+YWYLTN+GI++LR YL+LP EIVPATL++S Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS 97
BLAST of DY260275 vs. ExPASy Swiss-Prot
Match: RS10_MOUSE (40S ribosomal protein S10 OS=Mus musculus GN=Rps10 PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.725e-27 Identity = 58/97 (59.79%), Postives = 77/97 (79.38%), Query Frame = 2 Query: 23 LIIPEKNRKEIRQYLFQEGVCYAKKDYNLAKPPEI---DVPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKS 304 +++P+KNR I + LF+EGV AKKD ++ K PE+ +VPNL V+K MQS KSR YV+E FAW H+YWYLTN+GI++LR YL+LP EIVPATL++S Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS 97
BLAST of DY260275 vs. ExPASy Swiss-Prot
Match: RS10_ICTPU (40S ribosomal protein S10 OS=Ictalurus punctatus GN=rps10 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.725e-27 Identity = 58/100 (58.00%), Postives = 78/100 (78.00%), Query Frame = 2 Query: 23 LIIPEKNRKEIRQYLFQEGVCYAKKDYNLAKPPEI---DVPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKP 313 +++P+KNR I + LF+EGV AKKD +LAK PE+ +VPNL V+K MQS KS YV+E FAW H+YWYLTN+GI++LR +L+LP EIVPATL++ +P Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHLAKHPELADKNVPNLHVMKAMQSLKSCGYVKEQFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRQTRP 100
BLAST of DY260275 vs. ExPASy Swiss-Prot
Match: RS10_HUMAN (40S ribosomal protein S10 OS=Homo sapiens GN=RPS10 PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.725e-27 Identity = 58/97 (59.79%), Postives = 77/97 (79.38%), Query Frame = 2 Query: 23 LIIPEKNRKEIRQYLFQEGVCYAKKDYNLAKPPEI---DVPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKS 304 +++P+KNR I + LF+EGV AKKD ++ K PE+ +VPNL V+K MQS KSR YV+E FAW H+YWYLTN+GI++LR YL+LP EIVPATL++S Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS 97 The following BLAST results are available for this feature:
BLAST of DY260275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260275 ID=DY260275; Name=DY260275; organism=Citrus clementina; type=EST; length=989bpback to top |