DY262448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_CARHZ (Ribonuclease 3 OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=rnc PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 3.649e-13 Identity = 70/250 (28.00%), Postives = 115/250 (46.00%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYTDS------TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVD--IDFDLQKLWMIFRGLLEPIVTLEELQQQPQ-PVTLLFKLCQKNGK-----QVDIKHWRKNRKNI-ASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQSMPV 845 +E I+ +NF N +L A+TH SY +RLEF+GDA L L +S+Y+F +PQ G L+ LR+ + E L +A K KF+R EF +Q + LA+ VE++ A+Y D I+ + ++ L+P E L+Q P+ T L +L QK ++ ++ ++K A V ++ +A+ + K+ A+ AA++AL L V Sbjct: 9 LEKILGFNFNNPSILLSAITHPSYAFEHPEEGIEHNERLEFLGDAVLELFISDYLFRTFPQKSEGDLTKLRSRLVCAESLYELAFKINLDKFLRLGKG-------EFKAGGNQRMSN------------LANAVEAVIGAVYFDCGIEAAFSFITRLYGEKLKP----ENLEQLPKDEKTTLQELLQKEKNNVLRYEILLEEGPPHQKIFTAGVIINDKLIATGRGKSKKEAEQEAAKKALELLKNEKEV 235
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_STRGC (Ribonuclease 3 OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=rnc PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 4.766e-13 Identity = 68/232 (29.31%), Postives = 106/232 (45.69%), Query Frame = 3 Query: 165 FKNKRLLEEALTHSSYTDS------TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGK-----QVDIKHWRKNRKNI-ASVYVDGSFVASASSEQKEIAKLNAAREALXK 824 FK+ LLE A TH+SY + + +RLEF+GDA L L +S Y+F YP+ G L+ LR+ + E LA GF + D + F + E+ + G + +L D+ E+ A+ +D ++ K ++ ++ P V + +Q T L +L Q NG QV + + KN SV VDG V K++A+ AA+ A K Sbjct: 16 FKDVSLLETAFTHTSYANEHRLLKISHNERLEFLGDAVLQLIISEYLFEKYPKRPEGDLTKLRSTIVREESLA------GFSR---------DCQFDRFIKLGKGEEKS----GGRERETILGDLFEAFLGALLLDKGLEVVKNFIY--QVMIPKVEAGDFEQVTDYKTKLQELLQSNGDVEILYQVVSESGPAHAKNFEVSVSVDGRLVGKGQGRSKKLAEQEAAKNAFEK 226
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_OCEIH (Ribonuclease 3 OS=Oceanobacillus iheyensis GN=rnc PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 6.224e-13 Identity = 66/249 (26.51%), Postives = 109/249 (43.78%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYTDS------TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFD----------LQKLWM-IFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQS 836 +E + +F+ K LL+EA THSSY + + +RLEF+GDA L LA+S Y++ + G+++ LRAA + L A + F KF+R E T G + P +LAD E+ A+Y+D FD KL F ++ L+E QQ + + +++ ++ G N++ +A V + + K+ A+ AA+ AL + S Sbjct: 6 LEEHLGISFQQKALLKEAFTHSSYVNEHRKQRLSDNERLEFLGDAVLELAVSQYLYRNNKDMPEGEMTKLRAAIVCEPSLKNFAEELEFGKFLRLGKG---------------EQQT----GGRERPAILADAFEAFLGALYLDQGFDNVLDFLNIHVFPKLTTGAFSHAMDYKSQLQEFVQQHKDQKIEYRIIEEKGPS-------HNKEFVAEVVIQEKAAGIGTGRTKKEAEQRAAKNALDSINNS 228
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_CLOPE (Ribonuclease 3 OS=Clostridium perfringens GN=rnc PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 6.224e-13 Identity = 61/247 (24.70%), Postives = 113/247 (45.75%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYT----DSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMI--FRGLLEPIVT----------LEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQ 833 VE +I F+NK +L ALTHSSY D +RLEF+GD+ L L ++ Y+F Y G+L+ +RA + L +V+ K++R S K +E G + + AD +E++ AA+Y+D ++ +++ F+ +++ + L+E+ Q+ V +++ L + G RK + ++ + K+ ++ NAA+ AL +L + Sbjct: 9 VEKLIGIEFENKGVLITALTHSSYANQFKDVKYNERLEFLGDSVLQLCVTKYLFNNYKDKSEGELTKIRALVVCENSLHKVSKNLSLGKYIRMS------KGEELT-------------GGRERTSIQADALEAVIAAVYLDKGIEVANDFILRNFKDVIDKAINEEIILDFKTRLQEVLQKNGEVNIVYNLVKHEGPP-------HRRKFFTDLLINNEIMGQGVGFSKKESEQNAAKAALQRLGE 229
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_FRAP2 (Ribonuclease 3 OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=rnc PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 8.129e-13 Identity = 48/138 (34.78%), Postives = 73/138 (52.90%), Query Frame = 3 Query: 150 IINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDF 563 I+ Y+FKN LL ALTH S T +Y+RLEF+GD+ LG ++ +++ +P L G+LS +R+ + LA + AL+ K+ E+ + E G K K+L D+ E+I AIY+D DF Sbjct: 11 ILGYSFKNYTLLVRALTHRSKTKK-NYERLEFLGDSILGFVIAEVLYMEFPDLAEGKLSQIRSKLVKGVTLANL---------------ALNFKLDEYIILGASEQ------GGHKREKILEDVFEAIIGAIYLDSDF 126
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_CLOB8 (Ribonuclease 3 OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=rnc PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 8.129e-13 Identity = 64/242 (26.45%), Postives = 109/242 (45.04%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSY----TDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVD--IDFDLQKLWMIFRGLLEPIVT----------LEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREAL 818 +E + F N LL+ ALTHSS+ D+ +RLEF+GD+ L L ++ Y+F Y G+L+ +R+ + L +A K ++R S +++ E +S + AD VE+I AA+Y+D I F + + F ++ + L+EL Q+ V + ++L + G RK +V +D + S K+ A+ NAA++AL Sbjct: 9 IEENLGVFFNNHTLLKTALTHSSFGNQFKDAEYNERLEFLGDSVLQLCITEYLFNNYKHKTEGELTKIRSLIVCENSLYEIAKKINLGSYIRMSKG---EEITGGRERIS----------------IQADAVEAIIAAVYLDKGIGFVRDFILLHFEEIINKAINNEIVLDFKTKLQELLQKDGEVVIQYELTKFEGPP-------HRRKFFTNVVIDKKLMGEGSGYSKKEAEQNAAKQAL 224
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_PEDPA (Ribonuclease 3 OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=rnc PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.062e-12 Identity = 64/239 (26.78%), Postives = 111/239 (46.44%), Query Frame = 3 Query: 162 NFKNKRLLEEALTHSSYTDSTS------YQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWM-------IFRGLLEPIV----TLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKL 827 +F N LL+EA T +SY + Y+R+EF+GDA L L +S Y+F YP++ G+L+ LRAA + + A + F +++R ++K G+ + +L DI ES A+Y+D + ++ + G + I+ L+EL Q+ V + ++L + G + D+ SV D +A+ + K++A+ NAA +AL L Sbjct: 16 HFNNHALLDEAFTQASYVNEHPHQELKFYERIEFLGDAVLQLIVSEYLFKRYPEMPQGKLTRLRAAMVCEASFSDFAKECHFDQYIRLGKG--EEK-----------------SGARQRSSLLCDIFESFIGALYLDQGRAAVERFVRIVIFPKLDEGKFDHIIDHKSELQELLQKNGDVEIDYELVSEEGPENDLIF-------TVSVTADHKKLATGTGHSKKVAEQNAANQALQLL 228
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_LACJO (Ribonuclease 3 OS=Lactobacillus johnsonii GN=rnc PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.062e-12 Identity = 56/227 (24.67%), Postives = 108/227 (47.58%), Query Frame = 3 Query: 165 FKNKRLLEEALTHSSYTDS----TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIY---VDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXK 824 F N++LLE+A THSSY + Y++LEF+GDA L LA+S+Y++ +P+L+ G+L+ +R+ + TE + A++ GF + + ++K ED + G++ + + + + +Y + DF+ + + L+E Q PV + +++ ++ + K + V+G V+ K+ A+ AA+ AL K Sbjct: 18 FNNEKLLEDAFTHSSYANEHPGRKDYEKLEFLGDAVLELAVSDYLYRHFPRLNEGELTRMRSNIVRTEGFSEFAIECGFPEEINLGKG--EEKAGARKRKTLLEDVFEAFNGALFLDQGMPAVQHFLHLTVYPLIAEGDFNASRDYK---------TELQERLQVNGPVKIEYQVISEDESKPSFK---------VQLLVNGEKVSEGQGRNKKAAEQQAAQAALDK 224
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_GEOSW (Ribonuclease 3 OS=Geobacillus sp. (strain WCH70) GN=rnc PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.062e-12 Identity = 63/238 (26.47%), Postives = 107/238 (44.96%), Query Frame = 3 Query: 165 FKNKRLLEEALTHSSYTDS------TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWM-----------IFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKL 827 F N++LL +A THSSY + +RLEF+GDA L L +S Y+F +P + G+L+ LRAA + L + A F E V + GG + P +LAD+ E+ A+Y+D D ++ F +++ L+EL Q+ L + + ++ G N++ ++ V ++G + + K+ A+ +AA+ AL KL Sbjct: 29 FTNEKLLIQAFTHSSYVNEHRRRPHEDNERLEFLGDAVLELTVSQYLFKKFPHMSEGELTKLRAAIVCEPSLVKFA------------------NALSFGELVLLGKGEELTGGRTR-PALLADVFEAFIGALYLDQGMDAVMQFLGQTIFPKIDEGAFSHVMDFKSQLQELVQRDGIGVLEYSILEEKGP-------AHNKEFVSRVSLNGQELGIGVGKSKKEAEQHAAQMALQKL 240
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_THIDA (Ribonuclease 3 OS=Thiobacillus denitrificans (strain ATCC 25259) GN=rnc PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.387e-12 Identity = 52/179 (29.05%), Postives = 88/179 (49.16%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVT-LEELQQQPQPVTLLFKLCQ 674 ++ + Y F LL++ALTH SY + + +RLEF+GD+ L +++ ++ A+P L G LS LRA + E LA +A A L D ++ + G + P +LAD +ES+ A+++D FD + + R L +P+V ++ P T L ++ Q Sbjct: 10 LQQALGYTFSRSGLLQQALTHRSY-GALNNERLEFLGDSVLNCSVARALYDAFPDLPEGSLSRLRANLVRQETLAEIA-----------GALRLGDSLR--------LGEGELKSGGFRRPSILADALESLFGAVFLDAGFD--EAQRVVRRLFDPLVAQIDPKASGKDPKTRLQEILQ 166 The following BLAST results are available for this feature:
BLAST of DY262448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 214
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262448 ID=DY262448; Name=DY262448; organism=Citrus clementina; type=EST; length=1334bpback to top |