DY262448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_NATTJ (Ribonuclease 3 OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=rnc PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.387e-12 Identity = 64/239 (26.78%), Postives = 110/239 (46.03%), Query Frame = 3 Query: 165 FKNKRLLEEALTHSSYTDSTS-----YQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQK--LWMIFRGLLEPI---------VTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQ 833 + + +LL +A+TH+SY +RLEF+GDA L LA+S ++ YP+L G+L+ LRA + L ++A K K++R ED+T G LAD VE++ A+Y+ ++D K + +F+ L I ++EL Q +++ +++G D + +A V ++ V S + K+ A+ NAA A KL++ Sbjct: 18 YVDDKLLLQAVTHTSYAHEQKDVVDHNERLEFLGDAVLELAISETLYKKYPELPEGELTKLRAELVCELSLVKIAEKLDLGKYLRLGKG---------------EDST----GGRDRRSTLADTVEALIGAVYLQTNYDQTKQLILDLFKDQLSHIDNQRIGDYKTMIQELVQDRYGDPPKYQIVKESGPDHD-------KSFVAEVQINNEVVGRGSGKSKKEAEQNAAHFAFQKLSK 230
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_CLOBB (Ribonuclease 3 OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=rnc PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.387e-12 Identity = 62/248 (25.00%), Postives = 113/248 (45.56%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSY----TDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVD--IDFDLQKLWMIFRGLLEPIVT----------LEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQS 836 +EN + F N L++ ALTHSS+ D+ +RLEF+GD+ L L ++ Y+F + G+L+ +R+ + L +A K +++R S K +E G + + AD VE++ AA+Y+D I F + + F ++ + L+EL Q+ + + ++L + G RK +V ++ + K+ A+ NAA+EAL +L ++ Sbjct: 9 IENRLGVYFNNPSLIKTALTHSSFGNQFKDAKYNERLEFLGDSVLQLCITEYLFNKFKDKSEGELTKIRSLIVCENSLYEIAKKLSLGEYIRMS------KGEELT-------------GGRERMSIQADAVEAVIAAVYLDKGIGFVNDFILLHFEEMINKAINNEIVLDFKTKLQELLQKDGEILIQYELVKYEGPP-------HRRKFFTNVIINEKVMGIGEGYSKKEAEQNAAKEALKRLEKN 230
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_CLOBA (Ribonuclease 3 OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=rnc PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.387e-12 Identity = 62/248 (25.00%), Postives = 113/248 (45.56%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSY----TDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVD--IDFDLQKLWMIFRGLLEPIVT----------LEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQS 836 +EN + F N L++ ALTHSS+ D+ +RLEF+GD+ L L ++ Y+F + G+L+ +R+ + L +A K +++R S K +E G + + AD VE++ AA+Y+D I F + + F ++ + L+EL Q+ + + ++L + G RK +V ++ + K+ A+ NAA+EAL +L ++ Sbjct: 9 IENRLGVYFNNPSLIKTALTHSSFGNQFKDAKYNERLEFLGDSVLQLCITEYLFNKFKDKSEGELTKIRSLIVCENSLYEIAKKLSLGEYIRMS------KGEELT-------------GGRERMSIQADAVEAVIAAVYLDKGIGFVNDFILLHFEEMINKAINNEIVLDFKTKLQELLQKDGEILIQYELLKYEGPP-------HRRKFFTNVIINEKVMGIGEGYSKKEAEQNAAKEALKRLEKN 230
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_CAMC5 (Ribonuclease 3 OS=Campylobacter curvus (strain 525.92) GN=rnc PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.387e-12 Identity = 67/241 (27.80%), Postives = 114/241 (47.30%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMI-----------FRGLLEPIVT-LEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKL 827 ++ ++ Y F+N +LL EALTH S S +RLEF+GDA + L + Y+F + + + G +S LRAA ++ + A +A RH ++ EF + E N GG KA +L+D E++ A+Y++ D + + F L++ T L+E+ Q T +++L + G K IA + D + ++ +KE A+ AA+ AL K+ Sbjct: 7 LQKLLGYEFENTKLLNEALTHKSTKLPYSNERLEFLGDAVMDLIVGEYLFKKFSKTNEGDMSKLRAALVNEKSFANMA---------RHL------QIGEFIHLSTAEANN---GGREKA-SLLSDAFEAVMGAVYLEAGLDKVREIAVRLLEICYPKIDFSHLVKDYKTALQEITQASLGTTPIYELVRSFGPD------HKKEFEIALLLNDKEISRAIANSKKE-AQQMAAKIALEKM 221
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_STRR6 (Ribonuclease 3 OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=rnc PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.365e-12 Identity = 69/248 (27.82%), Postives = 110/248 (44.35%), Query Frame = 3 Query: 120 MEDAVFYVENIINYNFKNKRLLEEALTHSSYTDS------TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIA-------SVYVDGSFVASASSEQKEIAKLNAAREALXK 824 M++ ++N F +K+LLE A TH+SY + + +RLEF+GDA L L +S Y++ YP+ G LS LRA + E LA GF A D + +F + E+ + G +L D E+ A+ +D D+ K+ ++ P V E + T L +L Q NG V I++ + A V V+G + K++A+ AA+ A+ K Sbjct: 1 MKELQTVLKNHFEIEFADKKLLETAFTHTSYANEHRLLKISHNERLEFLGDAVLQLLISEYLYKKYPKKPEGDLSKLRAMIVREESLA------GF---------ARDCQFDQFIKLGKGEEKS----GGRNRDTILGDAFEAFLGALL--LDKDVAKVKEFIYQVMIPKVEAGEFEMITDYKTHLQELLQVNG-DVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGRSKKLAEQEAAKNAVEK 226
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_STRP4 (Ribonuclease 3 OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=rnc PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.365e-12 Identity = 69/248 (27.82%), Postives = 110/248 (44.35%), Query Frame = 3 Query: 120 MEDAVFYVENIINYNFKNKRLLEEALTHSSYTDS------TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIA-------SVYVDGSFVASASSEQKEIAKLNAAREALXK 824 M++ ++N F +K+LLE A TH+SY + + +RLEF+GDA L L +S Y++ YP+ G LS LRA + E LA GF A D + +F + E+ + G +L D E+ A+ +D D+ K+ ++ P V E + T L +L Q NG V I++ + A V V+G + K++A+ AA+ A+ K Sbjct: 1 MKELQTVLKNHFEIEFADKKLLETAFTHTSYANEHRLLKISHNERLEFLGDAVLQLLISEYLYKKYPKKPEGDLSKLRAMIVREESLA------GF---------ARDCQFDQFIKLGKGEEKS----GGRNRDTILGDAFEAFLGALL--LDKDVAKVKEFIYQVMIPKVEAGEFEMITDYKTHLQELLQVNG-DVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGRSKKLAEQEAAKNAVEK 226
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_STRP2 (Ribonuclease 3 OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=rnc PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.365e-12 Identity = 69/248 (27.82%), Postives = 110/248 (44.35%), Query Frame = 3 Query: 120 MEDAVFYVENIINYNFKNKRLLEEALTHSSYTDS------TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIA-------SVYVDGSFVASASSEQKEIAKLNAAREALXK 824 M++ ++N F +K+LLE A TH+SY + + +RLEF+GDA L L +S Y++ YP+ G LS LRA + E LA GF A D + +F + E+ + G +L D E+ A+ +D D+ K+ ++ P V E + T L +L Q NG V I++ + A V V+G + K++A+ AA+ A+ K Sbjct: 1 MKELQTVLKNHFEIEFADKKLLETAFTHTSYANEHRLLKISHNERLEFLGDAVLQLLISEYLYKKYPKKPEGDLSKLRAMIVREESLA------GF---------ARDCQFDQFIKLGKGEEKS----GGRNRDTILGDAFEAFLGALL--LDKDVAKVKEFIYQVMIPKVEAGEFEMITDYKTHLQELLQVNG-DVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGRSKKLAEQEAAKNAVEK 226
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_LACLS (Ribonuclease 3 OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=rnc PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.365e-12 Identity = 56/226 (24.78%), Postives = 112/226 (49.56%), Query Frame = 3 Query: 165 FKNKRLLEEALTHSSYTDS------TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVR--HSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREAL 818 F ++ LL+ A THSS+T+ + +RLEF+GD AL L +S+Y++ YP+ G+LS +R++ + TE LA + GF +F+R H + + +E + E+ + G++ + + ++ + I + + D + +++ L+E+ Q T+ + + ++ G D R +A+VY +G + + K++A+ AA A+ Sbjct: 16 FNDEDLLKTAFTHSSFTNEERLPKIANNERLEFLGDVALSLVISDYLYRTYPEKLEGELSKMRSSIVRTESLANFSRSCGFGEFLRLGHGEEKMGGRDRE----TTLENLFEAFLGALFIDQGMDEVRKFIQHVVIPHVKND------DYVKVIDYKTELQEVLQVGGETTITYNILKEEGPAHD-------RSFVAAVYNNGKELGRGLGKSKKVAEQKAAENAI 224
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_CAMC1 (Ribonuclease 3 OS=Campylobacter concisus (strain 13826) GN=rnc PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.365e-12 Identity = 68/242 (28.10%), Postives = 111/242 (45.87%), Query Frame = 3 Query: 144 ENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPI--------------VTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKL 827 E + Y FK LLEEALTH S + + +RLEF+GDA + L ++ Y+F + ++ G +S LRAA ++ + A +A + +F+R S A +E+N G + +L+D E++ AIY ++ L K+ I LLE L+E+ Q V ++L G K IA + ++G ++ A K+ A+ AA+ AL K+ Sbjct: 8 ERNLGYKFKKSELLEEALTHKSTKQALNNERLEFLGDAVMDLLVAEYLFKKFSKIAEGDMSKLRAALVNEKSFANMARRLKMGEFLRLSQA--------------EENN-----GGREKDSILSDAFEAVMGAIY--LEAGLLKVREISISLLELCYPQIDFAHLEKDYKTALQEVTQATLGVIPTYELIGSFGPD------HKKEFEIA-LLLNGKEISRAVGSSKKQAQQLAAKIALEKI 221
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_SYMTH (Ribonuclease 3 OS=Symbiobacterium thermophilum GN=rnc PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.089e-12 Identity = 64/238 (26.89%), Postives = 114/238 (47.90%), Query Frame = 3 Query: 153 INYNFKNKRLLEEALTHSSYTD----STSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVD------IDFDLQKLWMIFRGLLEPIVTLE---ELQQQPQ---PVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREAL 818 + Y F+++ LL EALTH++Y + + + +RLEF+GD+ LG+ ++ +++ YP L G+L+ +RAA + LA A G + +R EAVS D + L+D E++ A+Y+D F L++L + + +V ++ +LQ+Q Q ++L + G H R+ + VY +G + + K+ A+ AAR+AL Sbjct: 18 LGYEFRDESLLLEALTHTTYANEHPRARANERLEFLGDSVLGMVIAAHLYERYPDLPEGELTKIRAAVVCEPSLAERARVLGIGRHMRFGR----------GEAVSGRDRDS----------TLSDAFEAVVGALYLDGGLEAAQRFVLRELGQLVEAARQGLVRVDYKTQLQEQLQRQGAAAPQYRLLVEEGP----AHLRRFQ---VGVYFEGRLLGTGWGRNKKEAEQEAARQAL 228 The following BLAST results are available for this feature:
BLAST of DY262448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 214
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262448 ID=DY262448; Name=DY262448; organism=Citrus clementina; type=EST; length=1334bpback to top |