DY262448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_STRE4 (Ribonuclease 3 OS=Streptococcus equi subsp. equi (strain 4047) GN=rnc PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.089e-12 Identity = 64/252 (25.40%), Postives = 113/252 (44.84%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYTDS------TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWM-------IFRGLLEPI----VTLEELQQQPQPVTLLFKLCQKNG----KQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQ 833 +EN N F +KRLLE A TH+SY + + +RLEF+GDA L L +S Y+F YP+ G +S LR+ + E LA GF ++ A + +E G +L D+ E+ A+ +D + + ++ + +G E + L+EL Q V + +++ + G KQ ++ +V V ++ + K++A+ +AA+ AL +L++ Sbjct: 8 LENSFNIRFDDKRLLETAFTHTSYANEHRLLNISHNERLEFLGDAVLQLIISEYLFAKYPKQTEGDMSKLRSTIVREESLA------GFSRYCSFDAYIKLGRGEE-------------KSGGRHRDTILGDLFEAFLGALLLDKGIEEVRRFLNQVMIPQVEQGTFEKVKDYKTCLQELLQAKGDVVIDYQVISETGPAHAKQFEV-----------AVLVGEDHLSKGTGRSKKLAEQDAAKNALAQLSE 229
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_LACLM (Ribonuclease 3 OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=rnc PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.089e-12 Identity = 56/226 (24.78%), Postives = 113/226 (50.00%), Query Frame = 3 Query: 165 FKNKRLLEEALTHSSYTDS------TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVR--HSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREAL 818 F ++ LL+ A THSS+T+ + +RLEF+GD AL L +S+Y++ YP+ G+LS +R++ + TE LA + GF +F+R H + + +E + E+ + G++ + + ++ + I + + D + +++ L+E+ Q T+ +K+ ++ G D R +A+V+ +G + + K++A+ AA A+ Sbjct: 16 FNDEYLLKTAFTHSSFTNEERLPKIANNERLEFLGDVALSLVISDYLYRTYPEKLEGELSKMRSSIVRTESLANFSRSCGFGEFLRLGHGEEKMGGRDRE----TTLENLFEAFLGALFIDQGMDEVRKFIQHVVIPHVKND------DYVKVIDYKTELQEVLQIGGETTISYKILKEEGPAHD-------RSFVAAVFNNGKELGRGLGKSKKVAEQKAAENAI 224
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_LACLA (Ribonuclease 3 OS=Lactococcus lactis subsp. lactis GN=rnc PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.089e-12 Identity = 56/226 (24.78%), Postives = 113/226 (50.00%), Query Frame = 3 Query: 165 FKNKRLLEEALTHSSYTDS------TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVR--HSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREAL 818 F ++ LL+ A THSS+T+ + +RLEF+GD AL L +S+Y++ YP+ G+LS +R++ + TE LA + GF +F+R H + + +E + E+ + G++ + + ++ + I + + D + +++ L+E+ Q T+ +K+ ++ G D R +A+V+ +G + + K++A+ AA A+ Sbjct: 16 FNDEDLLKTAFTHSSFTNEERLPKIANNERLEFLGDVALSLVISDYLYRTYPEKLEGELSKMRSSIVRTESLANFSRSCGFGEFLRLGHGEEKMGGRDRE----TTLENLFEAFLGALFIDQGMDEVRKFIQHVVIPHVKND------DYVKVIDYKTELQEVLQIGGETTISYKILKEEGPAHD-------RSFVAAVFNNGKELGRGLGKSKKVAEQKAAENAI 224
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_CHLSY (Ribonuclease 3 OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=rnc PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.089e-12 Identity = 69/249 (27.71%), Postives = 115/249 (46.18%), Query Frame = 3 Query: 120 MEDAVFYVENIINYNFKNKRLLEEALTHSSYTDS--------TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMI--FRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQV---DIKHWR---KNRKNIASVYVDGSFVASASSEQKEIAKLNAAREAL 818 M D + +E I F+++ LL+ A H S + T +RLEF+GD+ L + ++F +P D L+ RAA +ST+ LA A + + ++A EDN G K+LAD+ E++ AIY+D + + +++ ++ +E I+ ++ P T L +L Q KQ+ I+ R R+ + +V V G + S +KE AK AAR+AL Sbjct: 1 MSDRLAELERAIGITFRDRTLLQTAFMHRSLFNEQPHLLNHLTDNERLEFLGDSVLHFVTTTWLFETFPDQDEATLTNWRAALVSTKGLAECAAQF---------------NLGQYAYLSRGEDNP----GGRSRQKLLADLFEALVGAIYLDQGLETARAFIVPFWQARIEQIIHID-----LDPTTRLQELMQARFKQLPDYSIEEERGPEHQREYVMAVTVAGRKFTGSGSSKKE-AKRAAARKAL 224
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_CHLAA (Ribonuclease 3 OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=rnc PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.089e-12 Identity = 69/249 (27.71%), Postives = 115/249 (46.18%), Query Frame = 3 Query: 120 MEDAVFYVENIINYNFKNKRLLEEALTHSSYTDS--------TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMI--FRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQV---DIKHWR---KNRKNIASVYVDGSFVASASSEQKEIAKLNAAREAL 818 M D + +E I F+++ LL+ A H S + T +RLEF+GD+ L + ++F +P D L+ RAA +ST+ LA A + + ++A EDN G K+LAD+ E++ AIY+D + + +++ ++ +E I+ ++ P T L +L Q KQ+ I+ R R+ + +V V G + S +KE AK AAR+AL Sbjct: 1 MSDRLAELERAIGITFRDRTLLQTAFMHRSLFNEQPHLLNHLTDNERLEFLGDSVLHFVTTTWLFETFPDQDEATLTNWRAALVSTKGLAECAAQF---------------NLGQYAYLSRGEDNP----GGRSRQKLLADLFEALVGAIYLDQGLETARAFIVPFWQARIEQIIHID-----LDPTTRLQELMQARFKQLPDYSIEEERGPEHQREYVMAVTVAGRKFTGSGSSKKE-AKRAAARKAL 224
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_STRZJ (Ribonuclease 3 OS=Streptococcus pneumoniae (strain JJA) GN=rnc PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.034e-12 Identity = 69/248 (27.82%), Postives = 110/248 (44.35%), Query Frame = 3 Query: 120 MEDAVFYVENIINYNFKNKRLLEEALTHSSYTDS------TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIA-------SVYVDGSFVASASSEQKEIAKLNAAREALXK 824 M++ ++N F +K+LLE A TH+SY + + +RLEF+GDA L L +S Y++ YP+ G LS LRA + E LA GF A D + +F + E+ + G +L D E+ A+ +D D+ K+ ++ P V E + T L +L Q NG V I++ + A V V+G + K++A+ AA+ A+ K Sbjct: 1 MKELQTVLKNHFAIEFTDKKLLETAFTHTSYANEHRLLKISHNERLEFLGDAVLQLLISEYLYKKYPKKPEGDLSKLRAMIVREESLA------GF---------ARDCQFDQFIKLGKGEEKS----GGRNRDTILGDAFEAFLGALL--LDKDVAKVKEFIYQVMIPKVEAGEFEMITDYKTHLQELLQVNG-DVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGRSKKLAEQEAAKNAVEK 226
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_STRPS (Ribonuclease 3 OS=Streptococcus pneumoniae (strain CGSP14) GN=rnc PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.034e-12 Identity = 69/248 (27.82%), Postives = 110/248 (44.35%), Query Frame = 3 Query: 120 MEDAVFYVENIINYNFKNKRLLEEALTHSSYTDS------TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIA-------SVYVDGSFVASASSEQKEIAKLNAAREALXK 824 M++ ++N F +K+LLE A TH+SY + + +RLEF+GDA L L +S Y++ YP+ G LS LRA + E LA GF A D + +F + E+ + G +L D E+ A+ +D D+ K+ ++ P V E + T L +L Q NG V I++ + A V V+G + K++A+ AA+ A+ K Sbjct: 1 MKELQTVLKNHFAIEFTDKKLLETAFTHTSYANEHRLLKISHNERLEFLGDAVLQLLISEYLYKKYPKKPEGDLSKLRAMIVREESLA------GF---------ARDCQFDQFIKLGKGEEKS----GGRNRDTILGDAFEAFLGALL--LDKDVAKVKEFIYQVMIPKVEAGEFEMITDYKTHLQELLQVNG-DVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGRSKKLAEQEAAKNAVEK 226
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_STRPN (Ribonuclease 3 OS=Streptococcus pneumoniae GN=rnc PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.034e-12 Identity = 69/248 (27.82%), Postives = 110/248 (44.35%), Query Frame = 3 Query: 120 MEDAVFYVENIINYNFKNKRLLEEALTHSSYTDS------TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIA-------SVYVDGSFVASASSEQKEIAKLNAAREALXK 824 M++ ++N F +K+LLE A TH+SY + + +RLEF+GDA L L +S Y++ YP+ G LS LRA + E LA GF A D + +F + E+ + G +L D E+ A+ +D D+ K+ ++ P V E + T L +L Q NG V I++ + A V V+G + K++A+ AA+ A+ K Sbjct: 1 MKELQTVLKNHFAIEFADKKLLETAFTHTSYANEHRLLKISHNERLEFLGDAVLQLLISEYLYKKYPKKPEGDLSKLRAMIVREESLA------GF---------ARDCQFDQFIKLGKGEEKS----GGRNRDTILGDAFEAFLGALL--LDKDVAKVKEFIYQVMIPKVEAGEFEMITDYKTHLQELLQVNG-DVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGRSKKLAEQEAAKNAVEK 226
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_STRP7 (Ribonuclease 3 OS=Streptococcus pneumoniae (strain 70585) GN=rnc PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.034e-12 Identity = 69/248 (27.82%), Postives = 110/248 (44.35%), Query Frame = 3 Query: 120 MEDAVFYVENIINYNFKNKRLLEEALTHSSYTDS------TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIA-------SVYVDGSFVASASSEQKEIAKLNAAREALXK 824 M++ ++N F +K+LLE A TH+SY + + +RLEF+GDA L L +S Y++ YP+ G LS LRA + E LA GF A D + +F + E+ + G +L D E+ A+ +D D+ K+ ++ P V E + T L +L Q NG V I++ + A V V+G + K++A+ AA+ A+ K Sbjct: 1 MKELQTVLKNHFAIEFTDKKLLETAFTHTSYANEHRLLKISHNERLEFLGDAVLQLLISEYLYKKYPKKPEGDLSKLRAMIVREESLA------GF---------ARDCQFDQFIKLGKGEEKS----GGRNRDTILGDAFEAFLGALL--LDKDVAKVKEFIYQVMIPKVEAGEFEMITDYKTHLQELLQVNG-DVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGRSKKLAEQEAAKNAVEK 226
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_LACPL (Ribonuclease 3 OS=Lactobacillus plantarum GN=rnc PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.034e-12 Identity = 65/240 (27.08%), Postives = 109/240 (45.42%), Query Frame = 3 Query: 165 FKNKRLLEEALTHSSYTDSTS------YQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVD------IDFDLQKLWM-----IFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQ 833 F + LL EA T +SY + Y+R+EF+GDA L L +S Y++ Y + G+L+ LRAA + E A A + F +++R K ++ A A ++ +L DI ES A+Y+D + F Q ++ F G+ + TL+E Q+ V + ++L +++G R +V DG + K+ A+ +AAR+A +L Q Sbjct: 17 FNDPDLLAEAFTQASYVNEHQDQQLKYYERVEFLGDAVLELVVSEYLYKRYKDMPQGKLTRLRAAMVCEESFASFARECDFPQYIRLG------KGEQKAHAWERD-------------SLLCDIFESFVGALYLDQGREPVLKFVHQVIFPKLDEGRFDGVFDYKTTLQEYLQRDGDVAIDYQLIEQDGP-------ANERSYEIAVLADGQKIGEGWGHSKKEAEQSAARQAYSQLQQ 230 The following BLAST results are available for this feature:
BLAST of DY262448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 214
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262448 ID=DY262448; Name=DY262448; organism=Citrus clementina; type=EST; length=1334bpback to top |