DY262448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_DESRM (Ribonuclease 3 OS=Desulfotomaculum reducens (strain MI-1) GN=rnc PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.034e-12 Identity = 60/243 (24.69%), Postives = 108/243 (44.44%), Query Frame = 3 Query: 153 INYNFKNKRLLEEALTHSSYTDSTS------YQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMI--FRGLLEPIVT----------LEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKL 827 + + + N LL +ALTHSS QRLEF+GDA L L +S +++ +P G+L+ +RA+++ LA+VA + +R E+ + G + P +LAD E++ AIY+D ++ + +++ +++ +V L+E+ QQ P L + + ++G D + A V G + S K+ A+ AA++A L Sbjct: 15 LGFKWHNPTLLIQALTHSSCVHENRGHGLCHNQRLEFLGDAVLELIISEHLYKMFPDRTEGELTKMRASSVCEPSLAKVARGLDLGRCLRMGRG---------------EERS----GGRERPSILADAFEALLGAIYLDQGLEISRHFVLNCLSSIIDDVVAGRLDRDYKTELQEILQQSSPDPLTYTIMDESGPDHD-------KTFTAGVIYKGKVIGKGSGHSKKEAEQQAAKDAFQHL 231
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_CLOTE (Ribonuclease 3 OS=Clostridium tetani GN=rnc PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.034e-12 Identity = 68/248 (27.42%), Postives = 115/248 (46.37%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYTDSTSY----QRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMI--FRGLLEPIVTLEELQQQPQPVTLLFKLCQKNG----KQVDIKHW--RKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQSMPVN 848 ++N I F+N +LL ALTHSSY + +RLEF+GD+ L L ++ Y+F+ Y G+LS RA + L +A K E E + + GG + +LAD VE++ A+IY+D D+ + +++ F ++E + E + T L ++ QK+G + IKH RK V + + + K+ ++ NAA++A+ ++M VN Sbjct: 10 LQNKIEIKFENIKLLHIALTHSSYANEKKRIQYNERLEFLGDSVLQLVITEYLFMNYKDKSEGELSKKRALIVCENSLFSIA------------------KNLELGEYIKMSKGEELTGGRERI-SILADAVEALIASIYLDKGIDVVREFILKNFYNIVEKAMKDEIILDYK---TKLQEIIQKDGDIQINYILIKHEGPPHRRKFYTEVKIKDNVLGYGIGYSKKESEQNAAKKAI----ENMEVN 231
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_STRZP (Ribonuclease 3 OS=Streptococcus pneumoniae (strain P1031) GN=rnc PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 5.269e-12 Identity = 69/248 (27.82%), Postives = 109/248 (43.95%), Query Frame = 3 Query: 120 MEDAVFYVENIINYNFKNKRLLEEALTHSSYTDS------TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIA-------SVYVDGSFVASASSEQKEIAKLNAAREALXK 824 M++ ++N F +K LLE A TH+SY + + +RLEF+GDA L L +S Y++ YP+ G LS LRA + E LA GF A D + +F + E+ + G +L D E+ A+ +D D+ K+ ++ P V E + T L +L Q NG V I++ + A V V+G + K++A+ AA+ A+ K Sbjct: 1 MKELQTVLKNHFAIEFADKNLLETAFTHTSYANEHRLLKISHNERLEFLGDAVLQLLISEYLYKKYPKKPEGDLSKLRAMIVREESLA------GF---------ARDCQFNQFIKLGKGEEKS----GGRNRDTILGDAFEAFLGALL--LDKDVAKVKEFIYQVIIPKVEAGEFEMITDYKTHLQELLQVNG-DVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGRSKKLAEQEAAKNAVEK 226
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_THESQ (Ribonuclease 3 OS=Thermotoga sp. (strain RQ2) GN=rnc PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 6.882e-12 Identity = 69/236 (29.24%), Postives = 108/236 (45.76%), Query Frame = 3 Query: 162 NFKNKRLLEEALTHSSYTDST---------SYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFD-LQKLW-MIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKN---RKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKL 827 NFKN+ LL AL HSSY + S ++LEF+GDA L L + ++ YP+ + G L+ +++A S E LA V+ K KF+ E+ T G +LAD E++ AAIY+D ++ +++L+ F +E I+ E L + + + K + + KN R + V VDG +A+ K+ A+ AAR A KL Sbjct: 19 NFKNEELLFRALCHSSYANEQNQAGRKNVESNEKLEFLGDAVLELFVCEILYKKYPEAEVGDLARVKSAAASEEVLALVSRKMNLGKFLFLGKG---------------EEKT----GGRDRDSILADAFEALLAAIYLDQGYEKIKELFEQEFEFYIEKIMKGEMLFDYKTALQEIVQSEHKVPPEYVLVRTEKNDGDRIFVVEVRVDGKTIATGRGRTKKEAEKEAARIAYEKL 235
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_THEMA (Ribonuclease 3 OS=Thermotoga maritima GN=rnc PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 6.882e-12 Identity = 69/236 (29.24%), Postives = 108/236 (45.76%), Query Frame = 3 Query: 162 NFKNKRLLEEALTHSSYT---------DSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFD-LQKLW-MIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKN---RKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKL 827 NFKN+ LL AL HSSY D S ++LEF+GDA L L + ++ YP+ + G L+ +++A S E LA V+ K KF+ E+ T G +LAD E++ AAIY+D ++ +++L+ F +E I+ E L + + + K + + KN R + V V+G +A+ K+ A+ AAR A KL Sbjct: 19 NFKNEELLFRALCHSSYANEQNQAGRKDVESNEKLEFLGDAVLELFVCEILYKKYPEAEVGDLARVKSAAASEEVLAMVSRKMNLGKFLFLGKG---------------EEKT----GGRDRDSILADAFEALLAAIYLDQGYEKIKELFEQEFEFYIEKIMKGEMLFDYKTALQEIVQSEHKVPPEYILVRTEKNDGDRIFVVEVRVNGKTIATGKGRTKKEAEKEAARIAYEKL 235
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_STRZT (Ribonuclease 3 OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=rnc PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 6.882e-12 Identity = 69/248 (27.82%), Postives = 109/248 (43.95%), Query Frame = 3 Query: 120 MEDAVFYVENIINYNFKNKRLLEEALTHSSYTDS------TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIA-------SVYVDGSFVASASSEQKEIAKLNAAREALXK 824 M++ ++N F +K LLE A TH+SY + + +RLEF+GDA L L +S Y++ YP+ G LS LRA + E LA GF A D + +F + E+ + G +L D E+ A+ +D D+ K+ ++ P V E + T L +L Q NG V I++ + A V V+G + K++A+ AA+ A+ K Sbjct: 1 MKELQTVLKNHFAIEFTDKNLLETAFTHTSYANEHRLLKISHNERLEFLGDAVLQLLISEYLYKKYPKKPEGDLSKLRAMIVREESLA------GF---------ARDCQFDQFIKLGKGEEKS----GGRNRDTILGDAFEAFLGALL--LDKDVAKVKEFIYQVMIPKVEAGEFEMITDYKTHLQELLQVNG-DVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGRSKKLAEQEAAKNAVEK 226
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_STRPJ (Ribonuclease 3 OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=rnc PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 6.882e-12 Identity = 69/248 (27.82%), Postives = 109/248 (43.95%), Query Frame = 3 Query: 120 MEDAVFYVENIINYNFKNKRLLEEALTHSSYTDS------TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIA-------SVYVDGSFVASASSEQKEIAKLNAAREALXK 824 M++ ++N F +K LLE A TH+SY + + +RLEF+GDA L L +S Y++ YP+ G LS LRA + E LA GF A D + +F + E+ + G +L D E+ A+ +D D+ K+ ++ P V E + T L +L Q NG V I++ + A V V+G + K++A+ AA+ A+ K Sbjct: 1 MKELQTVLKNHFAIEFADKNLLETAFTHTSYANEHRLLKISHNERLEFLGDAVLQLLISEYLYKKYPKKPEGDLSKLRAMIVREESLA------GF---------ARDCQFDQFIKLGKGEEKS----GGRNRDTILGDAFEAFLGALL--LDKDVAKVKEFIYQVMIPKVEAGEFEMITDYKTHLQELLQVNG-DVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGRSKKLAEQEAAKNAVEK 226
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_STRPI (Ribonuclease 3 OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=rnc PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 6.882e-12 Identity = 69/248 (27.82%), Postives = 109/248 (43.95%), Query Frame = 3 Query: 120 MEDAVFYVENIINYNFKNKRLLEEALTHSSYTDS------TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIA-------SVYVDGSFVASASSEQKEIAKLNAAREALXK 824 M++ ++N F +K LLE A TH+SY + + +RLEF+GDA L L +S Y++ YP+ G LS LRA + E LA GF A D + +F + E+ + G +L D E+ A+ +D D+ K+ ++ P V E + T L +L Q NG V I++ + A V V+G + K++A+ AA+ A+ K Sbjct: 1 MKELQTVLKNHFAIEFADKNLLETAFTHTSYANEHRLLKISHNERLEFLGDAVLQLLISEYLYKKYPKKPEGDLSKLRAMIVREESLA------GF---------ARDCQFDQFIKLGKGEEKS----GGRNRDTILGDAFEAFLGALL--LDKDVAKVKEFIYQVMIPKVEAGEFEMITDYKTHLQELLQVNG-DVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGRSKKLAEQEAAKNAVEK 226
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_PSEPG (Ribonuclease 3 OS=Pseudomonas putida (strain GB-1) GN=rnc PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 6.882e-12 Identity = 47/142 (33.10%), Postives = 68/142 (47.89%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFD 566 +E + Y FKN+ + ALTH SY + +RLEF+GDA L +F +PQ GQLS LRA + E LAR+A +++R + L G + +LAD +E++ AIY+D D D Sbjct: 8 LERKLGYTFKNQDQMLLALTHRSYAGRNN-ERLEFLGDAILNFVAGEALFERFPQAREGQLSRLRARLVKGETLARLARGFDLGEYLRLGSGELK-------------------SGGFRRESILADALEALIGAIYLDADMD 129
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_BORBU (Ribonuclease 3 OS=Borrelia burgdorferi GN=rnc PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 6.882e-12 Identity = 63/246 (25.61%), Postives = 116/246 (47.15%), Query Frame = 3 Query: 138 YVENIINYNFKNKRLLEEALTHSSYTD-----STSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVA--VKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDID-----------FDLQKLWMIFRGLLEPIVT-LEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREAL 818 ++EN+ + +F N LL AL HSSY++ S++ +RLEF+GD+ L L ++++++ YP G+LS R+ +S + L+ +A + G Y + + D + K+ +LAD +E+ AIY+D FD+ M RG + + L+E Q+ ++ +KL ++ G D + +YV +F+++ + K+ A++ AA AL Sbjct: 22 FLENL-SIDFSNFDLLNTALCHSSYSNELDQKSSNNERLEFLGDSVLNLIITDHLYKTYPNKSEGELSKARSYIVSEDSLSNIAREINLGSYILLGRGEESNDGRNKK---------------------GILADAIEAFVGAIYLDSGFSRATEFVVGLFDMYIRLMFNRGDFKDYKSLLQEYVQKKYKISPSYKLDKEIGPDHD-------KVFCVELYVGENFISNGKGKSKKEAEMRAAEVAL 238 The following BLAST results are available for this feature:
BLAST of DY262448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 214
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262448 ID=DY262448; Name=DY262448; organism=Citrus clementina; type=EST; length=1334bpback to top |